RNA–Protein interactions for RNA: YKR028W

SAP190, Transcript of Protein that forms a complex with the Sit4p protein phosphatase, yeast

Gene SAP190, Length 3,102 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAP190	YKR028W	THI80	P35202	319 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	SPC97	P38863	823 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	SEO1	P39709	593 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	GTS1	P40956	396 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	ROK1	P45818	564 aa	Predicted RBP	2.27	□□□□□ -2.05
SAP190	YKR028W	NMD5	P46970	1048 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	AIM23	P47015	356 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	FAA4	P47912	694 aa	Known RBP	2.27	□□□□□ -2.05
SAP190	YKR028W	ECL1	P48235	211 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	PRP31	P49704	494 aa	Predicted RBP	2.27	□□□□□ -2.05
SAP190	YKR028W	CPR6	P53691	371 aa	Known RBP	2.27	□□□□□ -2.05
SAP190	YKR028W	COG6	P53959	839 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.27	□□□□□ -2.05	not detected
SAP190	YKR028W	YDR278C	Q05612	105 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	MCP2	Q06567	569 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	YOR387C	Q08910	206 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	YLR046C	Q12253	270 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	OCA6	Q12454	224 aa		2.27	□□□□□ -2.05
SAP190	YKR028W	NOP58	Q12499	511 aa	Known RBP	2.27	□□□□□ -2.05
SAP190	YKR028W	CDC24	P11433	854 aa	Predicted RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	SCH9	P11792	824 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.26	□□□□□ -2.05	not detected
SAP190	YKR028W	APA1	P16550	321 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	CLN1	P20437	546 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	MRPL25	P23369	157 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	GEX1	P25596	615 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	PPZ1	P26570	692 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	AEP1	P32493	518 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	STB6	P36085	766 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	GEX2	P36173	615 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	FTH1	P38310	465 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	STN1	P38960	494 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	CCT2	P39076	527 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	STL1	P39932	569 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	MIC19	P43594	170 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	TAH11	P47112	604 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	AIM14	P53109	570 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	COQ6	P53318	479 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	YNL144C	P53907	740 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	ELP3	Q02908	557 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	PIR1	Q03178	341 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	PPN1	Q04119	674 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	YOR012W	Q12351	137 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	PEX11	Q12462	236 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	AFI1	Q99222	893 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	MDM35	O60200	86 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	HOM2	P13663	365 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	YSP3	P25036	478 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SGF29	P25554	259 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SYP1	P25623	870 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	URA10	P30402	227 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	NDI1	P32340	513 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	PEX2	P32800	271 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	PMT1	P33775	817 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	STE13	P33894	931 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	KTR4	P38131	464 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SMF2	P38778	549 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	YJR061W	P40355	935 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	ATM1	P40416	690 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	MKT1	P40850	830 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	COG1	P53079	417 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	YNL143C	P53908	130 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	NUP100	Q02629	959 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	CDC123	Q05791	360 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	YPR114W	Q06107	315 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	RSC58	Q07979	502 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SRO7	Q12038	1033 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	YPL066W	Q12194	479 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	RMD5	Q12508	421 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	COX5A	P00424	153 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	INH1	P01097	85 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	RAD1	P06777	1100 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SST2	P11972	698 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	CDC34	P14682	295 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SIR1	P21691	654 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	HCM1	P25364	564 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	ILV6	P25605	309 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	YCR051W	P25631	222 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	LTV1	P34078	463 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	TFC3	P34111	1160 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	TOM20	P35180	183 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	YPT52	P36018	234 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	MRPL37	P36532	105 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	MAK5	P38112	773 aa	Predicted RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	MRP21	P38175	177 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SRP72	P38688	640 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	DBP8	P38719	431 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SSP120	P39931	234 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	HAT2	P39984	401 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SMX2	P40204	77 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	ERG10	P41338	398 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	IME4	P41833	600 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	CNN1	P43618	361 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	ARC1	P46672	376 aa	Known RBP	2.26	□□□□□ -2.05
SAP190	YKR028W	GLG2	P47011	380 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	SPC105	P53148	917 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	RTS3	P53289	263 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	PET117	Q02771	107 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	NHX1	Q04121	633 aa		2.26	□□□□□ -2.05
SAP190	YKR028W	GSF2	Q04697	403 aa	Known RBP	2.26	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms