RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
DOA1	YKL213C	MEX67	Q99257	599 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	CET1	O13297	549 aa	Predicted RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	STE3	P06783	470 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	PEP5	P12868	1029 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	PRP28	P23394	588 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	MGT1	P26188	188 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	CCZ1	P38273	704 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	SPP381	P38282	291 aa	Predicted RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	YHL012W	P38709	493 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	SMF2	P38778	549 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	FAA4	P47912	694 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
DOA1	YKL213C	SIW14	P53965	281 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	ADI1	Q03677	179 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	RVB1	Q03940	463 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	RBS1	Q05672	457 aa	Known RBP	4.91	□□□□□ -1.62
DOA1	YKL213C	CDC73	Q06697	393 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	AAD15	Q08361	143 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	NRT1	Q08485	598 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	YBL113C	Q7M4S9	792 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	AI5_ALPHA	Q9ZZX1	630 aa		4.91	□□□□□ -1.62
DOA1	YKL213C	MRM1	P25270	412 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	MAP2	P38174	421 aa	Known RBP	4.9	□□□□□ -1.62
DOA1	YKL213C	YBR138C	P38277	524 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	FTH1	P38310	465 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	SRP72	P38688	640 aa	Known RBP	4.9	□□□□□ -1.62
DOA1	YKL213C	NOP16	P40007	231 aa	Known RBP	4.9	□□□□□ -1.62
DOA1	YKL213C	KTR7	P40504	517 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	SPC105	P53148	917 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	YPL014W	Q02606	381 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	SEG1	Q04279	960 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	YLR012C	Q07927	99 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	RTT10	Q08924	1013 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	AFI1	Q99222	893 aa		4.9	□□□□□ -1.62
DOA1	YKL213C	MIS1	P09440	975 aa	Known RBP	4.9	□□□□□ -1.63
DOA1	YKL213C	IMA3	P0CW40	589 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	IMA4	P0CW41	589 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	PET122	P10355	254 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	CBF1	P17106	351 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	DMC1	P25453	334 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
DOA1	YKL213C	YAT2	P40017	923 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	SCC4	P40090	624 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	CHS6	P40955	746 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	GYP8	P43570	497 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	DLD2	P46681	530 aa	Known RBP	4.9	□□□□□ -1.63
DOA1	YKL213C	MDE1	P47095	244 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	PCL10	P53124	433 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	YPR003C	P53394	754 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	YNL035C	P53962	389 aa	Known RBP	4.9	□□□□□ -1.63
DOA1	YKL213C	YPL109C	Q02981	657 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	YMR206W	Q03695	313 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	ENT5	Q03769	411 aa	Known RBP	4.9	□□□□□ -1.63
DOA1	YKL213C	ATG17	Q06410	417 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	VPS36	Q06696	566 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	SWC7	Q06707	132 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	IMA2	Q08295	589 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	VHS3	Q08438	674 aa		4.9	□□□□□ -1.63
DOA1	YKL213C	RPS9A	O13516	197 aa	Known RBP	4.89	□□□□□ -1.63
DOA1	YKL213C	REV1	P12689	985 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	PAT1	P25644	796 aa	Known RBP	4.89	□□□□□ -1.63
DOA1	YKL213C	VPS17	P32913	551 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	PMT1	P33775	817 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	PTC3	P34221	468 aa	Known RBP	4.89	□□□□□ -1.63
DOA1	YKL213C	ADD66	P36040	267 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	SRL3	P36167	246 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	YMR262W	P38430	313 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	SRP68	P38687	599 aa	Known RBP	4.89	□□□□□ -1.63
DOA1	YKL213C	NEM1	P38757	446 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	SEC31	P38968	1273 aa	Known RBP	4.89	□□□□□ -1.63
DOA1	YKL213C	UBP7	P40453	1071 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	YJR039W	P47107	1121 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	MON1	P53129	644 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	YNR063W	P53749	607 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	IMP4	P53941	290 aa	Known RBP	4.89	□□□□□ -1.63
DOA1	YKL213C	YMR160W	Q03823	816 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	RSA3	Q05942	220 aa	Known RBP	4.89	□□□□□ -1.63
DOA1	YKL213C	DCS1	Q06151	350 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	YCS4	Q06156	1176 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	VIK1	Q12045	647 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	SCM3	Q12334	223 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	CMC2	Q3E7A4	109 aa		4.89	□□□□□ -1.63
DOA1	YKL213C	CMD1	P06787	147 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	HSF1	P10961	833 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	NCP1	P16603	691 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	HEM15	P16622	393 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	UTR2	P32623	467 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	SDS22	P36047	338 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	YBP1	P38315	674 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	FMO1	P38866	432 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	RRN7	P40992	514 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	LSB3	P43603	459 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	TAH11	P47112	604 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	ASN2	P49090	572 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	RTA1	P53047	317 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	COG2	P53271	262 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	YML131W	Q03102	365 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	YMR027W	Q04371	470 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	PNP1	Q05788	311 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 30.9 ms