RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	UIP3	P39547	235 aa		2.7	□□□□□ -1.98
SPE1	YKL184W	BUR6	P40096	142 aa		2.7	□□□□□ -1.98
SPE1	YKL184W	YJR061W	P40355	935 aa		2.7	□□□□□ -1.98
SPE1	YKL184W	DIM1	P41819	318 aa	Known RBP	2.7	□□□□□ -1.98
SPE1	YKL184W	MUB1	Q03162	620 aa		2.7	□□□□□ -1.98
SPE1	YKL184W	YEH2	Q07950	538 aa		2.7	□□□□□ -1.98
SPE1	YKL184W	DAP1	Q12091	152 aa		2.7	□□□□□ -1.98
SPE1	YKL184W	INP53	Q12271	1107 aa		2.7	□□□□□ -1.98
SPE1	YKL184W	YMR230W-A	Q3E7B5	62 aa		2.7	□□□□□ -1.98
SPE1	YKL184W	GLN3	P18494	730 aa		2.69	□□□□□ -1.98
SPE1	YKL184W	MCM4	P30665	933 aa	Known RBP	2.69	□□□□□ -1.98
SPE1	YKL184W	KTR3	P38130	404 aa	Predicted RBP	2.69	□□□□□ -1.98
SPE1	YKL184W	DHH1	P39517	506 aa	Known RBP	2.69	□□□□□ -1.98
SPE1	YKL184W	PHO90	P39535	881 aa		2.69	□□□□□ -1.98
SPE1	YKL184W	KAP123	P40069	1113 aa	Known RBP	2.69	□□□□□ -1.98
SPE1	YKL184W	ZDS2	P54786	942 aa		2.69	□□□□□ -1.98
SPE1	YKL184W	NUP100	Q02629	959 aa		2.69	□□□□□ -1.98
SPE1	YKL184W	ARP6	Q12509	438 aa		2.69	□□□□□ -1.98
SPE1	YKL184W	TOP1	P04786	769 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	ARG81	P05085	880 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	PHD1	P36093	366 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	DIA4	P38705	446 aa	Predicted RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	FET5	P43561	622 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	YGR021W	P53212	290 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	RCO1	Q04779	684 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	SKG3	Q06315	1026 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	SSK1	Q07084	712 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	PSK2	Q08217	1101 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	TRM8	Q12009	286 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	PPT2	Q12036	173 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	NKP1	Q12493	238 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	SNF1	P06782	633 aa	Known RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	PRP16	P15938	1071 aa	Predicted RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	DPB3	P27344	201 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	CMK1	P27466	446 aa	Known RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	SNC1	P31109	117 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	ERG1	P32476	496 aa	Known RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	SLC1	P33333	303 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	ROT2	P38138	954 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	DBP8	P38719	431 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	SLZ1	P40167	298 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	SEC24	P40482	926 aa	Known RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	ROK1	P45818	564 aa	Predicted RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	SOL4	P53315	255 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	TDA7	P53882	636 aa	Predicted RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	EMI2	Q04409	500 aa	Known RBP	2.68	□□□□□ -1.98
SPE1	YKL184W	PSR1	Q07800	427 aa		2.68	□□□□□ -1.98
SPE1	YKL184W	SNF3	P10870	884 aa		2.67	□□□□□ -1.98
SPE1	YKL184W	NOP1	P15646	327 aa	Known RBP	2.67	□□□□□ -1.98
SPE1	YKL184W	VMA16	P23968	213 aa		2.67	□□□□□ -1.98
SPE1	YKL184W	SNU114	P36048	1008 aa	Known RBP	2.67	□□□□□ -1.98
SPE1	YKL184W	ANS1	P38832	159 aa		2.67	□□□□□ -1.98
SPE1	YKL184W	PSD1	P39006	500 aa		2.67	□□□□□ -1.98
SPE1	YKL184W	AXL1	P40851	1208 aa		2.67	□□□□□ -1.98
SPE1	YKL184W	STR3	P53101	465 aa	Known RBP	2.67	□□□□□ -1.98
SPE1	YKL184W	TMA64	Q04600	565 aa	Known RBP	2.67	□□□□□ -1.98
SPE1	YKL184W	VID22	Q05934	901 aa		2.67	□□□□□ -1.98
SPE1	YKL184W	TFC6	Q06339	672 aa		2.67	□□□□□ -1.98
SPE1	YKL184W	BUD21	Q08492	214 aa	Predicted RBP	2.67	□□□□□ -1.98
SPE1	YKL184W	ATG9	Q12142	997 aa		2.67	□□□□□ -1.98
SPE1	YKL184W	RPB2	P08518	1224 aa	Known RBP	2.66	□□□□□ -1.98
SPE1	YKL184W	PRE8	P23639	250 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	PGS1	P25578	521 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	BUD14	P27637	709 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	ALY1	P36117	915 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	YBP1	P38315	674 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	YNG2	P38806	282 aa	Known RBP	2.66	□□□□□ -1.98
SPE1	YKL184W	UBA4	P38820	440 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	MDM31	P38880	579 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	IES5	P40060	125 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	DIA3	P52290	468 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	PKP2	P53170	491 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	SUB1	P54000	292 aa	Known RBP	2.66	□□□□□ -1.98
SPE1	YKL184W	GTR1	Q00582	310 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	INA17	Q02888	182 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	YMR160W	Q03823	816 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	MSS11	Q03825	758 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	FMP45	Q07651	309 aa		2.66	□□□□□ -1.98
SPE1	YKL184W	LEU9	Q12166	604 aa	Known RBP	2.66	□□□□□ -1.98
SPE1	YKL184W	TYR1	P20049	452 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	CPR3	P25719	182 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	ACH1	P32316	526 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	MRP20	P32387	263 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	PDB1	P32473	366 aa	Known RBP	2.65	□□□□□ -1.99
SPE1	YKL184W	VPS17	P32913	551 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	SPC34	P36131	295 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	AGP2	P38090	596 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	TSC10	P38342	320 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	YER010C	P40011	234 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	YTA12	P40341	825 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	IKS1	P47042	667 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	SGM1	P47166	707 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	RRT6	P53117	311 aa	Predicted RBP	2.65	□□□□□ -1.99
SPE1	YKL184W	YNR061C	P53747	219 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	IMP4	P53941	290 aa	Known RBP	2.65	□□□□□ -1.99
SPE1	YKL184W	ECM30	Q06673	1274 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	YOL159C	Q08300	171 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	TCO89	Q08921	799 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	YBR298C-A	Q8TGK4	73 aa		2.65	□□□□□ -1.99
SPE1	YKL184W	SEC62	P21825	274 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms