RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH1	YKL148C	ARB1	P40024	610 aa	Known RBP	11.98	□□□□□ -0.49
SDH1	YKL148C	ESL1	P40456	1118 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	MET18	P40469	1032 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	YRB2	P40517	327 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	DSL1	P53847	754 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	SPO20	Q04359	397 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	LDB18	Q07887	179 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	ICL2	Q12031	575 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	IOC2	Q12072	812 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	PKH2	Q12236	1081 aa	Known RBP	11.98	□□□□□ -0.49
SDH1	YKL148C	KSS1	P14681	368 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	FAR1	P21268	830 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	CLB3	P24870	427 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	YCR099C	P25657	155 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	CYS4	P32582	507 aa	Known RBP	11.98	□□□□□ -0.49
SDH1	YKL148C	FRE2	P36033	711 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	MAK5	P38112	773 aa	Predicted RBP	11.98	□□□□□ -0.49
SDH1	YKL148C	YHL041W	P38730	149 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	GOS1	P38736	223 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	TVP23	P38962	199 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	IRR1	P40541	1150 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	RPA14	P50106	137 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	SPP2	Q02521	185 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	YLR225C	Q05948	407 aa	Known RBP	11.98	□□□□□ -0.49
SDH1	YKL148C	RIF2	Q06208	395 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	MCM21	Q06675	368 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	SVS1	Q12254	260 aa		11.98	□□□□□ -0.49
SDH1	YKL148C	THP2	O13539	261 aa	Known RBP	11.97	□□□□□ -0.49
SDH1	YKL148C	AMD1	P15274	810 aa	Known RBP	11.97	□□□□□ -0.49
SDH1	YKL148C	MSS116	P15424	664 aa	Known RBP	11.97	□□□□□ -0.49
SDH1	YKL148C	AAT2	P23542	418 aa	Known RBP	11.97	□□□□□ -0.49
SDH1	YKL148C	CTR86	P25355	563 aa		11.97	□□□□□ -0.49
SDH1	YKL148C	SAC1	P32368	623 aa	Known RBP	11.97	□□□□□ -0.49
SDH1	YKL148C	MET4	P32389	672 aa		11.97	□□□□□ -0.49
SDH1	YKL148C	DSS4	P32601	143 aa		11.97	□□□□□ -0.49
SDH1	YKL148C	OPT1	P40897	799 aa		11.97	□□□□□ -0.49
SDH1	YKL148C	MSS2	P40990	351 aa		11.97	□□□□□ -0.49
SDH1	YKL148C	SED5	Q01590	340 aa		11.97	□□□□□ -0.49
SDH1	YKL148C	REH1	Q06709	432 aa		11.97	□□□□□ -0.49
SDH1	YKL148C	RSB1	Q08417	382 aa		11.97	□□□□□ -0.49
SDH1	YKL148C	MRH1	Q12117	320 aa	Predicted RBP	11.97	□□□□□ -0.49
SDH1	YKL148C	HAP2	P06774	265 aa		11.96	□□□□□ -0.49
SDH1	YKL148C	CIN8	P27895	1000 aa		11.96	□□□□□ -0.49
SDH1	YKL148C	IES5	P40060	125 aa		11.96	□□□□□ -0.49
SDH1	YKL148C	YRB1	P41920	201 aa	Known RBP	11.96	□□□□□ -0.49
SDH1	YKL148C	YJR107W	P47145	328 aa		11.96	□□□□□ -0.49
SDH1	YKL148C	STR3	P53101	465 aa	Known RBP	11.96	□□□□□ -0.49
SDH1	YKL148C	REG1	Q00816	1014 aa		11.96	□□□□□ -0.49
SDH1	YKL148C	SVL3	Q03088	825 aa	Known RBP	11.96	□□□□□ -0.49
SDH1	YKL148C	GOT1	Q03554	138 aa		11.96	□□□□□ -0.49
SDH1	YKL148C	UAF30	Q08747	228 aa		11.96	□□□□□ -0.49
SDH1	YKL148C	AHA1	Q12449	350 aa	Known RBP	11.96	□□□□□ -0.49
SDH1	YKL148C	ARG3	P05150	338 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	COS2	P0CX12	379 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	COS3	P0CX13	379 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	DMC1	P25453	334 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	FUN30	P31380	1131 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	BIO2	P32451	375 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	YHL012W	P38709	493 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	COS4	P43542	379 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	MTR3	P48240	250 aa	Predicted RBP	11.96	□□□□□ -0.5
SDH1	YKL148C	MRX6	P48564	524 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	GYP1	Q08484	637 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	RPN8	Q08723	338 aa	Known RBP	11.96	□□□□□ -0.5
SDH1	YKL148C	LDB19	Q12502	818 aa		11.96	□□□□□ -0.5
SDH1	YKL148C	CBP2	P03874	630 aa	Predicted RBP	11.95	□□□□□ -0.5
SDH1	YKL148C	MOT2	P34909	587 aa	Known RBP	11.95	□□□□□ -0.5
SDH1	YKL148C	YHR218W	P38899	603 aa		11.95	□□□□□ -0.5
SDH1	YKL148C	THO1	P40040	218 aa	Known RBP	11.95	□□□□□ -0.5
SDH1	YKL148C	AVT6	P40074	448 aa		11.95	□□□□□ -0.5
SDH1	YKL148C	IST3	P40565	148 aa	Predicted RBP	11.95	□□□□□ -0.5
SDH1	YKL148C	MMT1	Q03218	510 aa		11.95	□□□□□ -0.5
SDH1	YKL148C	TFB3	Q03290	321 aa		11.95	□□□□□ -0.5
SDH1	YKL148C	PEX12	Q04370	399 aa		11.95	□□□□□ -0.5
SDH1	YKL148C	DTD1	Q07648	150 aa	Known RBP	11.95	□□□□□ -0.5
SDH1	YKL148C	RAP1	P11938	827 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	MRPL32	P25348	183 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	ATO2	P32907	282 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	TPO5	P36029	618 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	STB5	P38699	743 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	SSZ1	P38788	538 aa	Known RBP	11.94	□□□□□ -0.5
SDH1	YKL148C	YMR099C	Q03161	297 aa	Known RBP	11.94	□□□□□ -0.5
SDH1	YKL148C	RAD33	Q04231	177 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	TRM12	Q04235	462 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	ECM22	Q05958	814 aa	Predicted RBP	11.94	□□□□□ -0.5
SDH1	YKL148C	GPB1	Q08886	897 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	LCB4	Q12246	624 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	STE14	P32584	239 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	COX13	P32799	129 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	DEF1	P35732	738 aa	Known RBP	11.94	□□□□□ -0.5
SDH1	YKL148C	ADD66	P36040	267 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	CAF4	P36130	643 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	MRPL17	P36528	281 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	SRP72	P38688	640 aa	Known RBP	11.94	□□□□□ -0.5
SDH1	YKL148C	RGI2	P40188	164 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	YJL070C	P40361	888 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	STB1	P42845	420 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	IRC5	P43610	853 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	KEL2	P50090	882 aa		11.94	□□□□□ -0.5
SDH1	YKL148C	SAP4	P53036	818 aa		11.94	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms