RNA–Protein interactions for RNA: YKL145W

RPT1, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeast

Gene RPT1, Length 1,404 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPT1	YKL145W	TPK1	P06244	397 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	HAP2	P06774	265 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	HIP1	P06775	603 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	ADE3	P07245	946 aa	Known RBP	5.68	□□□□□ -1.5
RPT1	YKL145W	RED1	P14291	827 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	RPO26	P20435	155 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	SEC1	P30619	724 aa	Known RBP	5.68	□□□□□ -1.5
RPT1	YKL145W	PEX2	P32800	271 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	ABZ1	P37254	787 aa	Predicted RBP	5.68	□□□□□ -1.5
RPT1	YKL145W	YMC2	P38087	329 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	GID8	P40208	455 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	KHA1	P40309	873 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	PRM2	P40534	656 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	OPT1	P40897	799 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	SNZ3	P43545	298 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	YFL040W	P43562	540 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	RPS0B	P46654	252 aa	Known RBP	5.68	□□□□□ -1.5
RPT1	YKL145W	POL31	P46957	487 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	IMA1	P53051	589 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	SNZ2	P53824	298 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	YPL071C	Q02864	156 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	IVY1	Q04934	453 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	ASM4	Q05166	528 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	CDA1	Q06702	301 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	AAD4	Q07747	329 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.68	□□□□□ -1.5	not detected
RPT1	YKL145W	DIS3	Q08162	1001 aa	Known RBP	5.68	□□□□□ -1.5
RPT1	YKL145W	RSB1	Q08417	382 aa		5.68	□□□□□ -1.5
RPT1	YKL145W	CKA1	P15790	372 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	PDX1	P16451	410 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	EST1	P17214	699 aa	Predicted RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	KRR1	P25586	316 aa	Predicted RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	ERG3	P32353	365 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	GCG1	P32656	232 aa	Known RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	CNS1	P33313	385 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	SRB2	P34162	210 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	RRP1	P35178	278 aa	Predicted RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	GCS1	P35197	352 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	MTH1	P35198	433 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	LRG1	P35688	1017 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	KDX1	P36005	433 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	TEF4	P36008	412 aa	Known RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	MRPL7	P36519	292 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	YBR056W	P38081	501 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	SHE3	P38272	425 aa	Known RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	TIF5	P38431	405 aa	Known RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	END3	P39013	349 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	AVT2	P39981	480 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	SSY5	P47002	699 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	INP52	P50942	1183 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	PEF1	P53238	335 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	SLG1	P54867	378 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	PNG1	Q02890	363 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	ELP3	Q02908	557 aa	Known RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	YMR187C	Q03236	431 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	ERV41	Q04651	352 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	PRM6	Q04705	352 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	AIM39	Q08223	395 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	DDC1	Q08949	612 aa		5.67	□□□□□ -1.5
RPT1	YKL145W	RIB2	Q12362	591 aa	Known RBP	5.67	□□□□□ -1.5
RPT1	YKL145W	RAD10	P06838	210 aa		5.66	□□□□□ -1.5
RPT1	YKL145W	PMS1	P14242	873 aa		5.66	□□□□□ -1.5
RPT1	YKL145W	TRX1	P22217	103 aa	Known RBP	5.66	□□□□□ -1.5
RPT1	YKL145W	MTC7	P32633	139 aa		5.66	□□□□□ -1.5
RPT1	YKL145W	WHI3	P34761	661 aa	Known RBP	5.66	□□□□□ -1.5
RPT1	YKL145W	MRPL36	P36531	177 aa		5.66	□□□□□ -1.5
RPT1	YKL145W	CTF8	P38877	133 aa		5.66	□□□□□ -1.5
RPT1	YKL145W	MKT1	P40850	830 aa	Known RBP	5.66	□□□□□ -1.5
RPT1	YKL145W	MIC19	P43594	170 aa		5.66	□□□□□ -1.5
RPT1	YKL145W	APL5	Q08951	932 aa	Known RBP	5.66	□□□□□ -1.5
RPT1	YKL145W	GPM2	Q12008	311 aa		5.66	□□□□□ -1.5
RPT1	YKL145W	YVC1	Q12324	675 aa		5.66	□□□□□ -1.5
RPT1	YKL145W	CDC8	P00572	216 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	URA3	P03962	267 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	ILS1	P09436	1072 aa	Known RBP	5.65	□□□□□ -1.5
RPT1	YKL145W	HSF1	P10961	833 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	PUT4	P15380	627 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	CWH43	P25618	953 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	GPI10	P30777	616 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	PET127	P32606	800 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	HMT1	P38074	348 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	PCA1	P38360	1216 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	MSG5	P38590	489 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	SAK1	P38990	1142 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	SAP1	P39955	897 aa	Known RBP	5.65	□□□□□ -1.5
RPT1	YKL145W	JHD1	P40034	492 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	YIL054W	P40524	105 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	YNL320W	P42840	284 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	SIP4	P46954	829 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	NMD5	P46970	1048 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	BSC5	P53755	489 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	YNL040W	P53960	456 aa	Predicted RBP	5.65	□□□□□ -1.5
RPT1	YKL145W	BET4	Q00618	327 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	UTP6	Q02354	440 aa	Known RBP	5.65	□□□□□ -1.5
RPT1	YKL145W	SIZ1	Q04195	904 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	NOP6	Q07623	225 aa	Known RBP	5.65	□□□□□ -1.5
RPT1	YKL145W	TAF10	Q12030	206 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	HRT3	Q12347	344 aa		5.65	□□□□□ -1.5
RPT1	YKL145W	UBR2	Q07963	1872 aa		5.65	□□□□□ -1.51
RPT1	YKL145W	ARG3	P05150	338 aa		5.65	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms