RNA–Protein interactions for RNA: YKL078W

DHR2, Transcript of Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, yeast

Gene DHR2, Length 2,208 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DHR2	YKL078W	SRP54	P20424	541 aa	Known RBP	4.11	□□□□□ -1.75
DHR2	YKL078W	CLB1	P24868	471 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	RPC53	P25441	422 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	POL4	P25615	582 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	CTS1	P29029	562 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	AUR1	P36107	401 aa	Predicted RBP	4.11	□□□□□ -1.75
DHR2	YKL078W	GLG1	P36143	616 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	UBP13	P38187	747 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	PHM8	P40025	321 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	LSM5	P40089	93 aa	Known RBP	4.11	□□□□□ -1.75
DHR2	YKL078W	RGI2	P40188	164 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	YNL247W	P53852	767 aa	Known RBP	4.11	□□□□□ -1.75
DHR2	YKL078W	NGL3	Q03210	505 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	YDR179W-A	Q03983	463 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	ESC8	Q08119	714 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	YJR112W-A	Q3E743	109 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	YOR019W	Q99248	730 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	NUP192	P47054	1683 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
DHR2	YKL078W	PDB1	P32473	366 aa	Known RBP	4.11	□□□□□ -1.75
DHR2	YKL078W	MTH1	P35198	433 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	CBR1	P38626	284 aa	Known RBP	4.11	□□□□□ -1.75
DHR2	YKL078W	BDH2	P39713	417 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	RPN11	P43588	306 aa	Known RBP	4.11	□□□□□ -1.75
DHR2	YKL078W	GPI8	P49018	411 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	YNR061C	P53747	219 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	TRS23	Q03784	219 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	YEH1	Q07804	573 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	ZPS1	Q12512	249 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	SMC6	Q12749	1114 aa		4.11	□□□□□ -1.75
DHR2	YKL078W	RNQ1	P25367	405 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	RFA2	P26754	273 aa	Known RBP	4.1	□□□□□ -1.75
DHR2	YKL078W	MAL33	P38157	468 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	REG2	P38232	338 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	EFM2	P38347	419 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	JHD1	P40034	492 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	RTT105	P40063	208 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	ROK1	P45818	564 aa	Predicted RBP	4.1	□□□□□ -1.75
DHR2	YKL078W	MSY1	P48527	492 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	STR3	P53101	465 aa	Known RBP	4.1	□□□□□ -1.75
DHR2	YKL078W	COG2	P53271	262 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	COQ6	P53318	479 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	YAT1	P80235	687 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	ATG26	Q06321	1198 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	CRN1	Q06440	651 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	AMD2	P22580	549 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	AAP1	P37898	856 aa	Known RBP	4.1	□□□□□ -1.75
DHR2	YKL078W	PCL5	P38794	229 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	TOM71	P38825	639 aa	Known RBP	4.1	□□□□□ -1.75
DHR2	YKL078W	MTG2	P38860	518 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	VPS41	P38959	992 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	YNL092W	P53934	400 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	YMR155W	Q03795	547 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	MRD1	Q06106	887 aa	Known RBP	4.1	□□□□□ -1.75
DHR2	YKL078W	ORM2	Q06144	216 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	LCB4	Q12246	624 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	SAC3	P46674	1301 aa		4.1	□□□□□ -1.75
DHR2	YKL078W	FAR1	P21268	830 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	LAC1	P28496	418 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	ORC2	P32833	620 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	UBP11	P36026	717 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	RPC37	P36121	282 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	ERC1	P38767	581 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	NPA3	P47122	385 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	VPS9	P54787	451 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	UBP16	Q02863	499 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	SPO19	Q03029	223 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	SWA2	Q06677	668 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	GRX6	Q12438	231 aa		4.09	□□□□□ -1.75
DHR2	YKL078W	COX1	P00401	534 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	YIH1	P25637	258 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	NIP100	P33420	868 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	TRM2	P33753	639 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	SEC31	P38968	1273 aa	Known RBP	4.09	□□□□□ -1.76
DHR2	YKL078W	SEC24	P40482	926 aa	Known RBP	4.09	□□□□□ -1.76
DHR2	YKL078W	MET28	P40573	187 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	OPT1	P40897	799 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	IST1	P53843	298 aa	Predicted RBP	4.09	□□□□□ -1.76
DHR2	YKL078W	AAT1	Q01802	451 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	YML037C	Q03703	340 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	VPS20	Q04272	221 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	YDR109C	Q04585	715 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	GPN2	Q08726	347 aa	Predicted RBP	4.09	□□□□□ -1.76
DHR2	YKL078W	MDM20	Q12387	796 aa	Known RBP	4.09	□□□□□ -1.76
DHR2	YKL078W	YIL002W-A	Q3E7Z5	69 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	AI5_ALPHA	Q9ZZX1	630 aa		4.09	□□□□□ -1.76
DHR2	YKL078W	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.08	□□□□□ -1.76
DHR2	YKL078W	CPA2	P03965	1118 aa	Known RBP	4.08	□□□□□ -1.76
DHR2	YKL078W	RNR3	P21672	869 aa	Known RBP	4.08	□□□□□ -1.76
DHR2	YKL078W	VMA16	P23968	213 aa		4.08	□□□□□ -1.76
DHR2	YKL078W	PRS1	P32895	427 aa	Known RBP	4.08	□□□□□ -1.76
DHR2	YKL078W	SWH1	P35845	1188 aa		4.08	□□□□□ -1.76
DHR2	YKL078W	NTR2	P36118	322 aa	Predicted RBP	4.08	□□□□□ -1.76
DHR2	YKL078W	VBA2	P38358	474 aa	Known RBP	4.08	□□□□□ -1.76
DHR2	YKL078W	MRX1	P40050	688 aa		4.08	□□□□□ -1.76
DHR2	YKL078W	MET18	P40469	1032 aa		4.08	□□□□□ -1.76
DHR2	YKL078W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
DHR2	YKL078W	YGL036W	P53185	909 aa	Predicted RBP	4.08	□□□□□ -1.76
DHR2	YKL078W	TIM44	Q01852	431 aa		4.08	□□□□□ -1.76
DHR2	YKL078W	BUD22	Q04347	519 aa	Known RBP	4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms