RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W RPL3P14126 387 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W CRM1P30822 1084 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W SPC110P32380 944 aa2.35□□□□□ -2.03
NUP100YKL068W MTC7P32633 139 aa2.35□□□□□ -2.03
NUP100YKL068W PEX32P38292 413 aa2.35□□□□□ -2.03
NUP100YKL068W PEX18P38855 283 aa2.35□□□□□ -2.03
NUP100YKL068W VFA1P40080 203 aa2.35□□□□□ -2.03
NUP100YKL068W VMA13P41807 478 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W GSM1P42950 618 aa2.35□□□□□ -2.03
NUP100YKL068W CAK1P43568 368 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W ALK1P43633 760 aaKnown RBP2.35□□□□□ -2.03
NUP100YKL068W PAN2P53010 1115 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W YGL242CP53066 181 aa2.35□□□□□ -2.03
NUP100YKL068W PEF1P53238 335 aa2.35□□□□□ -2.03
NUP100YKL068W RRP46P53256 223 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W INN1P53901 409 aa2.35□□□□□ -2.03
NUP100YKL068W SDH1Q00711 640 aa2.35□□□□□ -2.03
NUP100YKL068W YML037CQ03703 340 aa2.35□□□□□ -2.03
NUP100YKL068W YDR239CQ03780 787 aa2.35□□□□□ -2.03
NUP100YKL068W RPC11Q04307 110 aaPredicted RBP2.35□□□□□ -2.03
NUP100YKL068W VPS36Q06696 566 aa2.35□□□□□ -2.03
NUP100YKL068W YDL176WQ12027 708 aa2.35□□□□□ -2.03
NUP100YKL068W OSW2Q12202 724 aa2.35□□□□□ -2.03
NUP100YKL068W HKR1P41809 1802 aa2.35□□□□□ -2.03
NUP100YKL068W PRB1P09232 635 aa2.34□□□□□ -2.03
NUP100YKL068W BUD5P25300 642 aaPredicted RBP2.34□□□□□ -2.03
NUP100YKL068W MET22P32179 357 aa2.34□□□□□ -2.03
NUP100YKL068W YSC84P32793 468 aa2.34□□□□□ -2.03
NUP100YKL068W RPT5P33297 434 aaKnown RBP2.34□□□□□ -2.03
NUP100YKL068W PMT1P33775 817 aa2.34□□□□□ -2.03
NUP100YKL068W AUR1P36107 401 aaPredicted RBP2.34□□□□□ -2.03
NUP100YKL068W MMS4P38257 691 aa2.34□□□□□ -2.03
NUP100YKL068W MPT5P39016 859 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03 RIP-Chip
NUP100YKL068W AFG3P39925 761 aa2.34□□□□□ -2.03
NUP100YKL068W SSY5P47002 699 aa2.34□□□□□ -2.03
NUP100YKL068W TAH11P47112 604 aa2.34□□□□□ -2.03
NUP100YKL068W AAD10P47182 288 aa2.34□□□□□ -2.03
NUP100YKL068W CSL4P53859 292 aaPredicted RBP2.34□□□□□ -2.03
NUP100YKL068W AQR1P53943 586 aa2.34□□□□□ -2.03
NUP100YKL068W REX2P54964 269 aaKnown RBP2.34□□□□□ -2.03
NUP100YKL068W MGR3Q04472 501 aa2.34□□□□□ -2.03
NUP100YKL068W YLR413WQ06689 675 aa2.34□□□□□ -2.03
NUP100YKL068W VAM6Q07468 1049 aa2.34□□□□□ -2.03
NUP100YKL068W HRK1Q08732 759 aaKnown RBP2.34□□□□□ -2.03
NUP100YKL068W LEU9Q12166 604 aaKnown RBP2.34□□□□□ -2.03
NUP100YKL068W YPT6Q99260 215 aa2.34□□□□□ -2.03
NUP100YKL068W TDH1P00360 332 aaKnown RBP2.34□□□□□ -2.04
NUP100YKL068W HMG2P12684 1045 aa2.34□□□□□ -2.04
NUP100YKL068W FRS1P15624 595 aaKnown RBP2.34□□□□□ -2.04
NUP100YKL068W HMX1P32339 317 aa2.34□□□□□ -2.04
NUP100YKL068W KRE6P32486 720 aa2.34□□□□□ -2.04
NUP100YKL068W ECM21P38167 1117 aaKnown RBP2.34□□□□□ -2.04
NUP100YKL068W CST26P38226 397 aa2.34□□□□□ -2.04
NUP100YKL068W ERC1P38767 581 aa2.34□□□□□ -2.04
NUP100YKL068W TED1P40533 473 aa2.34□□□□□ -2.04
NUP100YKL068W CHS6P40955 746 aa2.34□□□□□ -2.04
NUP100YKL068W MTR3P48240 250 aaPredicted RBP2.34□□□□□ -2.04
NUP100YKL068W VPS4P52917 437 aa2.34□□□□□ -2.04
NUP100YKL068W RAI1P53063 387 aaKnown RBP2.34□□□□□ -2.04
NUP100YKL068W TNA1P53322 534 aa2.34□□□□□ -2.04
NUP100YKL068W TRS31Q03337 283 aa2.34□□□□□ -2.04
NUP100YKL068W YMR265CQ03508 461 aaKnown RBP2.34□□□□□ -2.04
NUP100YKL068W VPS64Q03944 604 aa2.34□□□□□ -2.04
NUP100YKL068W ADY4Q05955 493 aa2.34□□□□□ -2.04
NUP100YKL068W ECM7Q06200 448 aa2.34□□□□□ -2.04
NUP100YKL068W YEH1Q07804 573 aa2.34□□□□□ -2.04
NUP100YKL068W SGO1Q08490 590 aa2.34□□□□□ -2.04
NUP100YKL068W ELG1Q12050 791 aa2.34□□□□□ -2.04
NUP100YKL068W ATG29Q12092 213 aa2.34□□□□□ -2.04
NUP100YKL068W SWT1Q12104 458 aa2.34□□□□□ -2.04
NUP100YKL068W ADF1Q2V2Q1 113 aa2.34□□□□□ -2.04
NUP100YKL068W YJR112W-AQ3E743 109 aa2.34□□□□□ -2.04
NUP100YKL068W PNO1Q99216 274 aaKnown RBP2.34□□□□□ -2.04
NUP100YKL068W VCX1Q99385 411 aa2.34□□□□□ -2.04
NUP100YKL068W GAL80P04387 435 aa2.33□□□□□ -2.04
NUP100YKL068W PYC1P11154 1178 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W MSN4P33749 630 aa2.33□□□□□ -2.04
NUP100YKL068W YBL055CP34220 418 aaPredicted RBP2.33□□□□□ -2.04
NUP100YKL068W CDS1P38221 457 aa2.33□□□□□ -2.04
NUP100YKL068W ARP1P38696 384 aa2.33□□□□□ -2.04
NUP100YKL068W ZRG8P40021 1076 aa2.33□□□□□ -2.04
NUP100YKL068W GIM3P53900 129 aa2.33□□□□□ -2.04
NUP100YKL068W PPM1Q04081 328 aa2.33□□□□□ -2.04
NUP100YKL068W DOT1Q04089 582 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W UFO1Q04511 668 aa2.33□□□□□ -2.04
NUP100YKL068W SOV1Q04748 898 aa2.33□□□□□ -2.04
NUP100YKL068W YDR061WQ12298 539 aa2.33□□□□□ -2.04
NUP100YKL068W TY1A-NL1Q12391 440 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W YML133CQ03099 1374 aa2.33□□□□□ -2.04
NUP100YKL068W SOD2P00447 233 aa2.33□□□□□ -2.04
NUP100YKL068W HIP1P06775 603 aa2.33□□□□□ -2.04
NUP100YKL068W ARG80P07249 177 aa2.33□□□□□ -2.04
NUP100YKL068W BIK1P11709 440 aa2.33□□□□□ -2.04
NUP100YKL068W SAM35P14693 329 aa2.33□□□□□ -2.04
NUP100YKL068W CAD1P24813 409 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W RPL5P26321 297 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W PRE2P30656 287 aaKnown RBP2.33□□□□□ -2.04
NUP100YKL068W LTV1P34078 463 aa2.33□□□□□ -2.04
NUP100YKL068W PHO11P35842 467 aa2.33□□□□□ -2.04
NUP100YKL068W MRPL37P36532 105 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms