RNA–Protein interactions for RNA: YHR098C

SFB3, Transcript of Component of the Sec23p-Sfb3p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB3, Length 2,790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB3YHR098C TPK3P05986 398 aa5.66□□□□□ -1.5
SFB3YHR098C SPE1P08432 466 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-HP0C2I4 478 aaKnown RBP5.66□□□□□ -1.5
SFB3YHR098C TY1A-AP0CX57 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-PR1P0CX58 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-ORP0CX59 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-PR2P0CX60 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-DR5P0CX65 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-ER2P0CX66 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-GR3P0CX67 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-LR1P0CX68 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-MR2P0CX69 440 aa5.66□□□□□ -1.5
SFB3YHR098C FBA1P14540 359 aaKnown RBP5.66□□□□□ -1.5
SFB3YHR098C ISC10P32645 267 aa5.66□□□□□ -1.5
SFB3YHR098C SER1P33330 395 aaKnown RBP5.66□□□□□ -1.5
SFB3YHR098C KTR4P38131 464 aa5.66□□□□□ -1.5
SFB3YHR098C SEC31P38968 1273 aaKnown RBP5.66□□□□□ -1.5
SFB3YHR098C AVT2P39981 480 aa5.66□□□□□ -1.5
SFB3YHR098C LCB2P40970 561 aa5.66□□□□□ -1.5
SFB3YHR098C YFL066CP43538 392 aa5.66□□□□□ -1.5
SFB3YHR098C GUS1P46655 708 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
SFB3YHR098C TY1A-JR2P47099 440 aa5.66□□□□□ -1.5
SFB3YHR098C SRB7P47822 140 aa5.66□□□□□ -1.5
SFB3YHR098C LIF1P53150 421 aa5.66□□□□□ -1.5
SFB3YHR098C CAF40P53829 373 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-DR1Q03856 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-ML1Q04706 440 aaKnown RBP5.66□□□□□ -1.5
SFB3YHR098C COS7Q07788 383 aa5.66□□□□□ -1.5
SFB3YHR098C AVO1Q08236 1176 aa5.66□□□□□ -1.5
SFB3YHR098C YPL277CQ08989 487 aa5.66□□□□□ -1.5
SFB3YHR098C ULA1Q12059 462 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-BRQ12217 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-NL2Q12470 440 aa5.66□□□□□ -1.5
SFB3YHR098C TY1A-GR2Q12485 440 aa5.66□□□□□ -1.5
SFB3YHR098C CHS2P14180 963 aa5.66□□□□□ -1.5
SFB3YHR098C UBC8P28263 218 aa5.66□□□□□ -1.5
SFB3YHR098C DBF20P32328 564 aa5.66□□□□□ -1.5
SFB3YHR098C PCA1P38360 1216 aa5.66□□□□□ -1.5
SFB3YHR098C LEU5P38702 357 aa5.66□□□□□ -1.5
SFB3YHR098C HOC1P47124 396 aa5.66□□□□□ -1.5
SFB3YHR098C ARO8P53090 500 aaKnown RBP5.66□□□□□ -1.5
SFB3YHR098C FMP48P53233 369 aa5.66□□□□□ -1.5
SFB3YHR098C DBP9Q06218 594 aaKnown RBP5.66□□□□□ -1.5
SFB3YHR098C RSC2Q06488 889 aa5.66□□□□□ -1.5
SFB3YHR098C YLL007CQ07799 665 aa5.66□□□□□ -1.5
SFB3YHR098C ENT4Q07872 247 aa5.66□□□□□ -1.5
SFB3YHR098C MED11Q99278 115 aa5.66□□□□□ -1.5
SFB3YHR098C TUB3P09734 445 aaKnown RBP5.65□□□□□ -1.5
SFB3YHR098C KGD1P20967 1014 aaKnown RBP5.65□□□□□ -1.5
SFB3YHR098C VAC17P25591 423 aa5.65□□□□□ -1.5
SFB3YHR098C WHI3P34761 661 aaKnown RBP5.65□□□□□ -1.5
SFB3YHR098C PTK1P36002 662 aaPredicted RBP5.65□□□□□ -1.5
SFB3YHR098C MIT1P40002 666 aa5.65□□□□□ -1.5
SFB3YHR098C YIL054WP40524 105 aa5.65□□□□□ -1.5
SFB3YHR098C BRE2P43132 505 aa5.65□□□□□ -1.5
SFB3YHR098C YJL045WP47052 634 aa5.65□□□□□ -1.5
SFB3YHR098C NAS6P50086 228 aa5.65□□□□□ -1.5
SFB3YHR098C BIO3P50277 480 aa5.65□□□□□ -1.5
SFB3YHR098C YAP1802P53309 568 aa5.65□□□□□ -1.5
SFB3YHR098C BSC5P53755 489 aa5.65□□□□□ -1.5
SFB3YHR098C UGO1Q03327 502 aa5.65□□□□□ -1.5
SFB3YHR098C YLL032CQ07834 825 aaKnown RBP RIP-Chip data5.65□□□□□ -1.5not detected
SFB3YHR098C RTC5Q12108 567 aaKnown RBP5.65□□□□□ -1.5
SFB3YHR098C MDM12Q92328 271 aa5.65□□□□□ -1.5
SFB3YHR098C DSF1P0CX08 502 aa5.65□□□□□ -1.51
SFB3YHR098C YNR073CP0CX09 502 aa5.65□□□□□ -1.51
SFB3YHR098C NSP1P14907 823 aaKnown RBP5.65□□□□□ -1.51
SFB3YHR098C MET16P18408 261 aaPredicted RBP5.65□□□□□ -1.51
SFB3YHR098C CYM1P32898 989 aa5.65□□□□□ -1.51
SFB3YHR098C PTC1P35182 281 aa5.65□□□□□ -1.51
SFB3YHR098C TEF4P36008 412 aaKnown RBP5.65□□□□□ -1.51
SFB3YHR098C ERR3P42222 437 aa5.65□□□□□ -1.51
SFB3YHR098C LYS4P49367 693 aaPredicted RBP5.65□□□□□ -1.51
SFB3YHR098C SNF12P53628 566 aa5.65□□□□□ -1.51
SFB3YHR098C RPN9Q04062 393 aaKnown RBP5.65□□□□□ -1.51
SFB3YHR098C PDR8Q06149 701 aa5.65□□□□□ -1.51
SFB3YHR098C REC8Q12188 680 aa5.65□□□□□ -1.51
SFB3YHR098C YDL206WQ12424 762 aa5.65□□□□□ -1.51
SFB3YHR098C CAR1P00812 333 aaKnown RBP5.64□□□□□ -1.51
SFB3YHR098C YGL041W-AP0C5N3 154 aa5.64□□□□□ -1.51
SFB3YHR098C CMP2P14747 604 aa5.64□□□□□ -1.51
SFB3YHR098C DAL2P25335 343 aa5.64□□□□□ -1.51
SFB3YHR098C YHR045WP38775 560 aa5.64□□□□□ -1.51
SFB3YHR098C YHK8P38776 514 aa5.64□□□□□ -1.51
SFB3YHR098C ATG7P38862 630 aa5.64□□□□□ -1.51
SFB3YHR098C SWD1P39706 426 aa5.64□□□□□ -1.51
SFB3YHR098C UTP18P40362 594 aaPredicted RBP5.64□□□□□ -1.51
SFB3YHR098C CCT7P42943 550 aaKnown RBP5.64□□□□□ -1.51
SFB3YHR098C PRY3P47033 881 aa5.64□□□□□ -1.51
SFB3YHR098C TRS130Q03660 1102 aa5.64□□□□□ -1.51
SFB3YHR098C RRP17Q04031 235 aaPredicted RBP5.64□□□□□ -1.51
SFB3YHR098C GMC2Q06201 188 aa5.64□□□□□ -1.51
SFB3YHR098C EMG1Q06287 252 aaKnown RBP5.64□□□□□ -1.51
SFB3YHR098C HDA3Q06623 655 aa5.64□□□□□ -1.51
SFB3YHR098C ILV1P00927 576 aaKnown RBP5.64□□□□□ -1.51
SFB3YHR098C MRP2P10663 115 aaPredicted RBP5.64□□□□□ -1.51
SFB3YHR098C NDI1P32340 513 aa5.64□□□□□ -1.51
SFB3YHR098C RGT1P32862 1170 aa5.64□□□□□ -1.51
SFB3YHR098C MTW1P39731 289 aa5.64□□□□□ -1.51
SFB3YHR098C PHM8P40025 321 aa5.64□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 38.1 ms