RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C THI80P35202 319 aa13.06□□□□□ -0.32
SHU1YHL006C YHR020WP38708 688 aaKnown RBP13.06□□□□□ -0.32
SHU1YHL006C UBA4P38820 440 aa13.06□□□□□ -0.32
SHU1YHL006C GIM4P40005 111 aaKnown RBP13.06□□□□□ -0.32
SHU1YHL006C GAT1P43574 510 aa13.06□□□□□ -0.32
SHU1YHL006C YMR027WQ04371 470 aa13.06□□□□□ -0.32
SHU1YHL006C GRS2Q06817 618 aa13.06□□□□□ -0.32
SHU1YHL006C MRH1Q12117 320 aaPredicted RBP13.06□□□□□ -0.32
SHU1YHL006C RIO1Q12196 484 aaKnown RBP13.06□□□□□ -0.32
SHU1YHL006C GPR1Q12361 961 aa13.06□□□□□ -0.32
SHU1YHL006C NHA1Q99271 985 aa13.06□□□□□ -0.32
SHU1YHL006C HRP1Q99383 534 aaKnown RBP13.06□□□□□ -0.32
SHU1YHL006C RPB2P08518 1224 aaKnown RBP13.05□□□□□ -0.32
SHU1YHL006C AMS1P22855 1083 aa13.05□□□□□ -0.32
SHU1YHL006C YEL043WP32618 956 aa13.05□□□□□ -0.32
SHU1YHL006C DEF1P35732 738 aaKnown RBP13.05□□□□□ -0.32
SHU1YHL006C YHR182WP38870 785 aa13.05□□□□□ -0.32
SHU1YHL006C LYS1P38998 373 aaRIP-Chip data13.05□□□□□ -0.32 RIP-Chip
SHU1YHL006C LRO1P40345 661 aa13.05□□□□□ -0.32
SHU1YHL006C INA22P40576 216 aa13.05□□□□□ -0.32
SHU1YHL006C ALA1P40825 983 aaKnown RBP13.05□□□□□ -0.32
SHU1YHL006C RHO3Q00245 231 aaKnown RBP13.05□□□□□ -0.32
SHU1YHL006C CTK1Q03957 528 aaKnown RBP13.05□□□□□ -0.32
SHU1YHL006C SSL1Q04673 461 aaPredicted RBP13.05□□□□□ -0.32
SHU1YHL006C SUL2Q12325 893 aa13.05□□□□□ -0.32
SHU1YHL006C DOM34P33309 386 aa13.04□□□□□ -0.32
SHU1YHL006C HSE1P38753 452 aa13.04□□□□□ -0.32
SHU1YHL006C MNN1P39106 762 aa13.04□□□□□ -0.32
SHU1YHL006C UTP18P40362 594 aaPredicted RBP13.04□□□□□ -0.32
SHU1YHL006C PFA3P42836 336 aa13.04□□□□□ -0.32
SHU1YHL006C PET130P47065 347 aa13.04□□□□□ -0.32
SHU1YHL006C ARE2P53629 642 aaKnown RBP13.04□□□□□ -0.32
SHU1YHL006C HST2P53686 357 aa13.04□□□□□ -0.32
SHU1YHL006C SPP2Q02521 185 aa13.04□□□□□ -0.32
SHU1YHL006C RSC2Q06488 889 aa13.04□□□□□ -0.32
SHU1YHL006C YOL073CQ08232 322 aa13.04□□□□□ -0.32
SHU1YHL006C BSC6Q08280 497 aa13.04□□□□□ -0.32
SHU1YHL006C SKN1P33336 771 aa13.03□□□□□ -0.32
SHU1YHL006C AAT1Q01802 451 aa13.03□□□□□ -0.32
SHU1YHL006C TRM12Q04235 462 aa13.03□□□□□ -0.32
SHU1YHL006C ICT1Q12385 394 aa13.03□□□□□ -0.32
SHU1YHL006C RRP12Q12754 1228 aaKnown RBP13.03□□□□□ -0.32
SHU1YHL006C HSH49Q99181 213 aaPredicted RBP13.03□□□□□ -0.32
SHU1YHL006C ILS1P09436 1072 aaKnown RBP13.02□□□□□ -0.33
SHU1YHL006C GPA2P10823 449 aa13.02□□□□□ -0.33
SHU1YHL006C KAR4P25583 335 aa13.02□□□□□ -0.33
SHU1YHL006C PET309P32522 965 aaPredicted RBP13.02□□□□□ -0.33
SHU1YHL006C NTR2P36118 322 aaPredicted RBP13.02□□□□□ -0.33
SHU1YHL006C TRM7P38238 310 aaKnown RBP13.02□□□□□ -0.33
SHU1YHL006C YHR033WP38690 423 aa13.02□□□□□ -0.33
SHU1YHL006C ALK1P43633 760 aaKnown RBP13.02□□□□□ -0.33
SHU1YHL006C MAL13P53338 473 aa13.02□□□□□ -0.33
SHU1YHL006C BMT6Q12291 365 aa13.02□□□□□ -0.33
SHU1YHL006C YAR066WP0CX18 203 aa13.01□□□□□ -0.33
SHU1YHL006C YHR214WP0CX19 203 aa13.01□□□□□ -0.33
SHU1YHL006C YPT52P36018 234 aaKnown RBP13.01□□□□□ -0.33
SHU1YHL006C EMC3P36039 253 aa13.01□□□□□ -0.33
SHU1YHL006C UBS1P38290 277 aa13.01□□□□□ -0.33
SHU1YHL006C HAT2P39984 401 aa13.01□□□□□ -0.33
SHU1YHL006C DIC1Q06143 298 aa13.01□□□□□ -0.33
SHU1YHL006C ERF2Q06551 359 aa13.01□□□□□ -0.33
SHU1YHL006C MDM35O60200 86 aa13□□□□□ -0.33
SHU1YHL006C PDC5P16467 563 aaKnown RBP13□□□□□ -0.33
SHU1YHL006C HRR25P29295 494 aaKnown RBP13□□□□□ -0.33
SHU1YHL006C OLA1P38219 394 aaKnown RBP13□□□□□ -0.33
SHU1YHL006C YHR045WP38775 560 aa13□□□□□ -0.33
SHU1YHL006C MPT5P39016 859 aaKnown RBP RIP-Chip data13□□□□□ -0.33not detected
SHU1YHL006C SGF73P53165 657 aa13□□□□□ -0.33
SHU1YHL006C BUD32P53323 261 aa13□□□□□ -0.33
SHU1YHL006C PNP1Q05788 311 aa13□□□□□ -0.33
SHU1YHL006C SEC39Q12745 709 aa13□□□□□ -0.33
SHU1YHL006C SEC53P07283 254 aaKnown RBP12.99□□□□□ -0.33
SHU1YHL006C GCD11P32481 527 aaKnown RBP12.99□□□□□ -0.33
SHU1YHL006C BEM3P32873 1128 aa12.99□□□□□ -0.33
SHU1YHL006C YHL008CP38750 627 aa12.99□□□□□ -0.33
SHU1YHL006C YFR020WP43600 232 aa12.99□□□□□ -0.33
SHU1YHL006C RTS3P53289 263 aa12.99□□□□□ -0.33
SHU1YHL006C ADE12P80210 433 aaKnown RBP12.99□□□□□ -0.33
SHU1YHL006C PST1Q12355 444 aa12.99□□□□□ -0.33
SHU1YHL006C CMR1Q12510 522 aaKnown RBP12.99□□□□□ -0.33
SHU1YHL006C SEC14P24280 304 aaKnown RBP12.98□□□□□ -0.33
SHU1YHL006C MGM101P32787 269 aaKnown RBP12.98□□□□□ -0.33
SHU1YHL006C LAS1P36146 502 aaPredicted RBP12.98□□□□□ -0.33
SHU1YHL006C EFM1P38732 585 aa12.98□□□□□ -0.33
SHU1YHL006C SPG5P42933 373 aa12.98□□□□□ -0.33
SHU1YHL006C RIM21P48565 533 aa12.98□□□□□ -0.33
SHU1YHL006C NOP14Q99207 810 aaKnown RBP12.98□□□□□ -0.33
SHU1YHL006C PRP16P15938 1071 aaPredicted RBP12.97□□□□□ -0.33
SHU1YHL006C HOP1P20050 605 aa12.97□□□□□ -0.33
SHU1YHL006C MSB1P21339 1137 aaKnown RBP12.97□□□□□ -0.33
SHU1YHL006C YCR006CP25350 157 aa12.97□□□□□ -0.33
SHU1YHL006C MEI5P32489 222 aa12.97□□□□□ -0.33
SHU1YHL006C RPC37P36121 282 aa12.97□□□□□ -0.33
SHU1YHL006C FMP46P36141 133 aaKnown RBP12.97□□□□□ -0.33
SHU1YHL006C PLB1P39105 664 aa12.97□□□□□ -0.33
SHU1YHL006C ALR2P43553 858 aa12.97□□□□□ -0.33
SHU1YHL006C GCV1P48015 400 aa12.97□□□□□ -0.33
SHU1YHL006C BOL2P53082 120 aa12.97□□□□□ -0.33
SHU1YHL006C SLT2Q00772 484 aa12.97□□□□□ -0.33
SHU1YHL006C RRB1Q04225 511 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 5,963 RNA–protein pairs in 44.5 ms