RNA–Protein interactions for RNA: YGR156W

PTI1, Transcript of Essential component of CPF (cleavage and polyadenylation factor), yeastyeast

Gene PTI1, Length 1,278 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTI1YGR156W YDL242WQ07746 117 aa3.77□□□□□ -1.81
PTI1YGR156W CRT10Q08226 957 aa3.77□□□□□ -1.81
PTI1YGR156W NOP58Q12499 511 aaKnown RBP3.77□□□□□ -1.81
PTI1YGR156W YER175W-AQ8TGU4 54 aa3.77□□□□□ -1.81
PTI1YGR156W YBR126W-AQ8TGU7 68 aa3.77□□□□□ -1.81
PTI1YGR156W YOR111WQ99210 232 aa3.77□□□□□ -1.81
PTI1YGR156W TY1B-NL2Q99337 1749 aaKnown RBP3.77□□□□□ -1.81
PTI1YGR156W PCT1P13259 424 aa3.76□□□□□ -1.81
PTI1YGR156W CKA1P15790 372 aa3.76□□□□□ -1.81
PTI1YGR156W SRP54P20424 541 aaKnown RBP3.76□□□□□ -1.81
PTI1YGR156W ERG3P32353 365 aa3.76□□□□□ -1.81
PTI1YGR156W TFC3P34111 1160 aa3.76□□□□□ -1.81
PTI1YGR156W LSM5P40089 93 aaKnown RBP3.76□□□□□ -1.81
PTI1YGR156W MAF1P41910 395 aa3.76□□□□□ -1.81
PTI1YGR156W MRX6P48564 524 aa3.76□□□□□ -1.81
PTI1YGR156W YGR079WP53249 370 aa3.76□□□□□ -1.81
PTI1YGR156W YGR250CP53316 781 aaKnown RBP3.76□□□□□ -1.81
PTI1YGR156W COP1P53622 1201 aaKnown RBP3.76□□□□□ -1.81
PTI1YGR156W GIS2P53849 153 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81 RIP-Chip
PTI1YGR156W YML119WQ03208 357 aa3.76□□□□□ -1.81
PTI1YGR156W NGL3Q03210 505 aa3.76□□□□□ -1.81
PTI1YGR156W RAD30Q04049 632 aa3.76□□□□□ -1.81
PTI1YGR156W HRD3Q05787 833 aa3.76□□□□□ -1.81
PTI1YGR156W RIX7Q07844 837 aaKnown RBP3.76□□□□□ -1.81
PTI1YGR156W SRL1Q08673 210 aa3.76□□□□□ -1.81
PTI1YGR156W ARG3P05150 338 aa3.75□□□□□ -1.81
PTI1YGR156W SEC53P07283 254 aaKnown RBP3.75□□□□□ -1.81
PTI1YGR156W RFA2P26754 273 aaKnown RBP3.75□□□□□ -1.81
PTI1YGR156W UBP13P38187 747 aa3.75□□□□□ -1.81
PTI1YGR156W YNG2P38806 282 aaKnown RBP3.75□□□□□ -1.81
PTI1YGR156W FLO5P38894 1075 aa3.75□□□□□ -1.81
PTI1YGR156W LAS21P40367 830 aa3.75□□□□□ -1.81
PTI1YGR156W PFK26P40433 827 aaKnown RBP3.75□□□□□ -1.81
PTI1YGR156W IME4P41833 600 aa3.75□□□□□ -1.81
PTI1YGR156W MDG1P53885 366 aa3.75□□□□□ -1.81
PTI1YGR156W SNA4Q07549 140 aa3.75□□□□□ -1.81
PTI1YGR156W GPN2Q08726 347 aaPredicted RBP3.75□□□□□ -1.81
PTI1YGR156W CTI6Q08923 506 aa3.75□□□□□ -1.81
PTI1YGR156W SPE4Q12455 300 aa3.75□□□□□ -1.81
PTI1YGR156W HSH49Q99181 213 aaPredicted RBP3.75□□□□□ -1.81
PTI1YGR156W YOR019WQ99248 730 aa3.75□□□□□ -1.81
PTI1YGR156W SEC7P11075 2009 aaKnown RBP3.75□□□□□ -1.81
PTI1YGR156W SES1P07284 462 aaKnown RBP3.74□□□□□ -1.81
PTI1YGR156W YER190C-BP0CX94 160 aa3.74□□□□□ -1.81
PTI1YGR156W YEL077W-AP0CX95 160 aa3.74□□□□□ -1.81
PTI1YGR156W YGR296C-BP0CX96 160 aa3.74□□□□□ -1.81
PTI1YGR156W YPL283W-BP0CX97 160 aa3.74□□□□□ -1.81
PTI1YGR156W YPR204C-AP0CX98 160 aa3.74□□□□□ -1.81
PTI1YGR156W ROX1P25042 368 aa3.74□□□□□ -1.81
PTI1YGR156W CCT6P39079 546 aa3.74□□□□□ -1.81
PTI1YGR156W RGI2P40188 164 aa3.74□□□□□ -1.81
PTI1YGR156W SPO22P40511 975 aa3.74□□□□□ -1.81
PTI1YGR156W SWP82P43554 623 aa3.74□□□□□ -1.81
PTI1YGR156W NPA3P47122 385 aa3.74□□□□□ -1.81
PTI1YGR156W YGL036WP53185 909 aaPredicted RBP3.74□□□□□ -1.81
PTI1YGR156W UBP16Q02863 499 aa3.74□□□□□ -1.81
PTI1YGR156W RAD33Q04231 177 aa3.74□□□□□ -1.81
PTI1YGR156W YPL191CQ08930 360 aa3.74□□□□□ -1.81
PTI1YGR156W PCL8Q08966 492 aa3.74□□□□□ -1.81
PTI1YGR156W HUA2Q12134 243 aa3.74□□□□□ -1.81
PTI1YGR156W COX1P00401 534 aa3.73□□□□□ -1.81
PTI1YGR156W RRP43P25359 394 aaPredicted RBP3.73□□□□□ -1.81
PTI1YGR156W PGS1P25578 521 aa3.73□□□□□ -1.81
PTI1YGR156W YJU2P28320 278 aaPredicted RBP3.73□□□□□ -1.81
PTI1YGR156W PDB1P32473 366 aaKnown RBP3.73□□□□□ -1.81
PTI1YGR156W GDA1P32621 518 aa3.73□□□□□ -1.81
PTI1YGR156W ATO2P32907 282 aa3.73□□□□□ -1.81
PTI1YGR156W RPF2P36160 344 aaKnown RBP3.73□□□□□ -1.81
PTI1YGR156W AAP1P37898 856 aaKnown RBP3.73□□□□□ -1.81
PTI1YGR156W YBL029WP38201 376 aa3.73□□□□□ -1.81
PTI1YGR156W VBA2P38358 474 aaKnown RBP3.73□□□□□ -1.81
PTI1YGR156W SEC24P40482 926 aaKnown RBP3.73□□□□□ -1.81
PTI1YGR156W MET28P40573 187 aa3.73□□□□□ -1.81
PTI1YGR156W AXL1P40851 1208 aa3.73□□□□□ -1.81
PTI1YGR156W ARF3P40994 183 aaRIP-Chip data3.73□□□□□ -1.81 RIP-Chip
PTI1YGR156W LYS4P49367 693 aaPredicted RBP3.73□□□□□ -1.81
PTI1YGR156W DSD1P53095 428 aa3.73□□□□□ -1.81
PTI1YGR156W JJJ1P53863 590 aa3.73□□□□□ -1.81
PTI1YGR156W BOP3P53958 396 aa3.73□□□□□ -1.81
PTI1YGR156W FCP1Q03254 732 aa3.73□□□□□ -1.81
PTI1YGR156W SYF1Q04048 859 aaPredicted RBP3.73□□□□□ -1.81
PTI1YGR156W SNU66Q12420 587 aaPredicted RBP3.73□□□□□ -1.81
PTI1YGR156W GRX6Q12438 231 aa3.73□□□□□ -1.81
PTI1YGR156W YSP2Q06681 1438 aa3.72□□□□□ -1.81
PTI1YGR156W YBR085C-AO43137 85 aa3.72□□□□□ -1.81
PTI1YGR156W MET17P06106 444 aa3.72□□□□□ -1.81
PTI1YGR156W NOP1P15646 327 aaKnown RBP3.72□□□□□ -1.81
PTI1YGR156W PRE8P23639 250 aa3.72□□□□□ -1.81
PTI1YGR156W LCB1P25045 558 aaKnown RBP3.72□□□□□ -1.81
PTI1YGR156W OCA4P25366 362 aa3.72□□□□□ -1.81
PTI1YGR156W COQ3P27680 312 aa3.72□□□□□ -1.81
PTI1YGR156W KES1P35844 434 aaKnown RBP3.72□□□□□ -1.81
PTI1YGR156W AUR1P36107 401 aaPredicted RBP3.72□□□□□ -1.81
PTI1YGR156W NTR2P36118 322 aaPredicted RBP3.72□□□□□ -1.81
PTI1YGR156W MTG2P38860 518 aa3.72□□□□□ -1.81
PTI1YGR156W LNP1P38878 278 aa3.72□□□□□ -1.81
PTI1YGR156W RTS1P38903 757 aa3.72□□□□□ -1.81
PTI1YGR156W SEC31P38968 1273 aaKnown RBP3.72□□□□□ -1.81
PTI1YGR156W YEL057CP39983 233 aa3.72□□□□□ -1.81
PTI1YGR156W YIR016WP40572 265 aa3.72□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms