RNA–Protein interactions for RNA: YER018C

SPC25, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC25, Length 666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC25YER018C ATG10Q07879 167 aa10.74□□□□□ -0.69
SPC25YER018C SMF3Q12078 473 aaPredicted RBP10.74□□□□□ -0.69
SPC25YER018C GNT1Q12096 491 aa10.74□□□□□ -0.69
SPC25YER018C GTT2Q12390 233 aa10.74□□□□□ -0.69
SPC25YER018C SUC2P00724 532 aa10.73□□□□□ -0.69
SPC25YER018C CPA1P07258 411 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C NMT1P14743 455 aa10.73□□□□□ -0.69
SPC25YER018C PRP4P20053 465 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C NIP1P32497 812 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C SKT5P34226 696 aa10.73□□□□□ -0.69
SPC25YER018C THI80P35202 319 aa10.73□□□□□ -0.69
SPC25YER018C EAP1P36041 632 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C TAE1P38340 232 aa10.73□□□□□ -0.69
SPC25YER018C DBP8P38719 431 aa10.73□□□□□ -0.69
SPC25YER018C VMA13P41807 478 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C YRB1P41920 201 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C LSM3P57743 89 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C NPL3Q01560 414 aaKnown RBP RIP-Chip data10.73□□□□□ -0.69 RIP-Chip
SPC25YER018C ARX1Q03862 593 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C RSC3Q06639 885 aa10.73□□□□□ -0.69
SPC25YER018C HBT1Q07653 1046 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C YOR012WQ12351 137 aa10.73□□□□□ -0.69
SPC25YER018C RIB2Q12362 591 aaKnown RBP10.73□□□□□ -0.69
SPC25YER018C NOT5Q12514 560 aaPredicted RBP10.73□□□□□ -0.69
SPC25YER018C OXP1P28273 1286 aa10.72□□□□□ -0.69
SPC25YER018C TFC3P34111 1160 aa10.72□□□□□ -0.69
SPC25YER018C ERP5P38819 212 aa10.72□□□□□ -0.69
SPC25YER018C CYC2P38909 366 aa10.72□□□□□ -0.69
SPC25YER018C MPT5P39016 859 aaKnown RBP RIP-Chip data10.72□□□□□ -0.69not detected
SPC25YER018C NBP35P52920 328 aa10.72□□□□□ -0.69
SPC25YER018C EFM5P53200 248 aaKnown RBP10.72□□□□□ -0.69
SPC25YER018C OPI10Q08202 246 aa10.72□□□□□ -0.69
SPC25YER018C PRP16P15938 1071 aaPredicted RBP10.71□□□□□ -0.69
SPC25YER018C CLB1P24868 471 aa10.71□□□□□ -0.69
SPC25YER018C TOA1P32773 286 aa10.71□□□□□ -0.69
SPC25YER018C TIP20P33891 701 aa10.71□□□□□ -0.69
SPC25YER018C BZZ1P38822 633 aa10.71□□□□□ -0.69
SPC25YER018C FMO1P38866 432 aa10.71□□□□□ -0.69
SPC25YER018C SSN3P39073 555 aa10.71□□□□□ -0.69
SPC25YER018C PIK1P39104 1066 aa10.71□□□□□ -0.69
SPC25YER018C YHB1P39676 399 aaKnown RBP10.71□□□□□ -0.69
SPC25YER018C CCE1Q03702 353 aa10.71□□□□□ -0.69
SPC25YER018C EMI1Q04406 187 aa10.71□□□□□ -0.69
SPC25YER018C HDA3Q06623 655 aa10.71□□□□□ -0.69
SPC25YER018C Q0182Q9ZZW1 134 aa10.71□□□□□ -0.69
SPC25YER018C YKR104WP0CE69 306 aa10.7□□□□□ -0.7
SPC25YER018C SPT15P13393 240 aaKnown RBP10.7□□□□□ -0.7
SPC25YER018C LRG1P35688 1017 aa10.7□□□□□ -0.7
SPC25YER018C NUP120P35729 1037 aa10.7□□□□□ -0.7
SPC25YER018C CAB3P36076 571 aa10.7□□□□□ -0.7
SPC25YER018C GMH1P36125 273 aa10.7□□□□□ -0.7
SPC25YER018C VRP1P37370 817 aa10.7□□□□□ -0.7
SPC25YER018C IML3P38265 245 aa10.7□□□□□ -0.7
SPC25YER018C LSM5P40089 93 aaKnown RBP10.7□□□□□ -0.7
SPC25YER018C COA1P40452 197 aa10.7□□□□□ -0.7
SPC25YER018C YFR018CP43599 363 aa10.7□□□□□ -0.7
SPC25YER018C YGL108CP53139 140 aa10.7□□□□□ -0.7
SPC25YER018C IBD2P53892 351 aa10.7□□□□□ -0.7
SPC25YER018C TRM12Q04235 462 aa10.7□□□□□ -0.7
SPC25YER018C RIF2Q06208 395 aa10.7□□□□□ -0.7
SPC25YER018C EXO70P19658 623 aa10.69□□□□□ -0.7
SPC25YER018C CHL1P22516 861 aaPredicted RBP10.69□□□□□ -0.7
SPC25YER018C RFA2P26754 273 aaKnown RBP10.69□□□□□ -0.7
SPC25YER018C RIM11P38615 370 aa10.69□□□□□ -0.7
SPC25YER018C DHH1P39517 506 aaKnown RBP10.69□□□□□ -0.7
SPC25YER018C UTP18P40362 594 aaPredicted RBP10.69□□□□□ -0.7
SPC25YER018C SLM2P53955 656 aa10.69□□□□□ -0.7
SPC25YER018C YMR102CQ03177 834 aa10.69□□□□□ -0.7
SPC25YER018C ARG7Q04728 441 aa10.69□□□□□ -0.7
SPC25YER018C VAM6Q07468 1049 aa10.69□□□□□ -0.7
SPC25YER018C HOM2P13663 365 aaKnown RBP10.68□□□□□ -0.7
SPC25YER018C POL30P15873 258 aaKnown RBP10.68□□□□□ -0.7
SPC25YER018C ARG1P22768 420 aa10.68□□□□□ -0.7
SPC25YER018C RSC6P25632 483 aa10.68□□□□□ -0.7
SPC25YER018C MVD1P32377 396 aaKnown RBP10.68□□□□□ -0.7
SPC25YER018C CTP1P38152 299 aa10.68□□□□□ -0.7
SPC25YER018C GIP1P38229 639 aa10.68□□□□□ -0.7
SPC25YER018C RFC3P38629 340 aa10.68□□□□□ -0.7
SPC25YER018C HXT5P38695 592 aa10.68□□□□□ -0.7
SPC25YER018C YHR020WP38708 688 aaKnown RBP10.68□□□□□ -0.7
SPC25YER018C YHR045WP38775 560 aa10.68□□□□□ -0.7
SPC25YER018C MEP1P40260 492 aa10.68□□□□□ -0.7
SPC25YER018C GAT1P43574 510 aa10.68□□□□□ -0.7
SPC25YER018C DAN4P47179 1161 aa10.68□□□□□ -0.7
SPC25YER018C TIS11P47977 285 aa10.68□□□□□ -0.7
SPC25YER018C ART5P53244 586 aaKnown RBP10.68□□□□□ -0.7
SPC25YER018C CWC24P53769 259 aa10.68□□□□□ -0.7
SPC25YER018C SNO2P53823 222 aa10.68□□□□□ -0.7
SPC25YER018C TGL2P54857 326 aa10.68□□□□□ -0.7
SPC25YER018C UBP2Q01476 1272 aa10.68□□□□□ -0.7
SPC25YER018C SAM4Q08985 325 aaKnown RBP10.68□□□□□ -0.7
SPC25YER018C TRM8Q12009 286 aa10.68□□□□□ -0.7
SPC25YER018C PHO5P00635 467 aa10.67□□□□□ -0.7
SPC25YER018C CDC21P06785 304 aa10.67□□□□□ -0.7
SPC25YER018C PHO84P25297 587 aaKnown RBP10.67□□□□□ -0.7
SPC25YER018C CCR4P31384 837 aaKnown RBP10.67□□□□□ -0.7
SPC25YER018C ATP11P32453 318 aa10.67□□□□□ -0.7
SPC25YER018C RML2P32611 393 aa10.67□□□□□ -0.7
SPC25YER018C YKL100CP34248 587 aa10.67□□□□□ -0.7
SPC25YER018C TCD2P36101 447 aaKnown RBP10.67□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms