RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	APE3	P37302	537 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
TFB3	YDR460W	YBL028C	P38202	106 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	FMP23	P38231	175 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	MIP6	P38760	659 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	RRP8	P38961	392 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	PEX7	P39108	375 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	FAF1	P40546	346 aa	Predicted RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	HXT9	P40885	567 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	MSS2	P40990	351 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	YFL054C	P43549	646 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	BST1	P43571	1029 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	ATG36	P46983	293 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	MNN11	P46985	422 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	LIA1	P47120	325 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	SAP4	P53036	818 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	YGR016W	P53209	190 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	COG2	P53271	262 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	UTP8	P53276	713 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	YTP1	P53584	459 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	RET3	P53600	189 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	TRM44	Q02648	567 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	MUK1	Q02866	612 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	RMT2	Q03305	412 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	YMR027W	Q04371	470 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	ARP9	Q05123	467 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	COA4	Q05809	96 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	VPS74	Q06385	345 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	DIB1	Q06819	143 aa	Predicted RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	YLR001C	Q07895	862 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	FLC1	Q08967	793 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	RCN2	Q12044	265 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	SPE3	Q12074	293 aa	Known RBP	4.59	□□□□□ -1.67
TFB3	YDR460W	NTO1	Q12311	748 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	ARP7	Q12406	477 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	ATG31	Q12421	196 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	YOS9	Q99220	542 aa		4.59	□□□□□ -1.67
TFB3	YDR460W	CIT1	P00890	479 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	RPL25	P04456	142 aa	Known RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	PEP5	P12868	1029 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	SPO12	P17123	173 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	ADY2	P25613	283 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	ARE1	P25628	610 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	YKL100C	P34248	587 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	TAF14	P35189	244 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	YET1	P35723	206 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	YPT52	P36018	234 aa	Known RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	STB6	P36085	766 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	CDS1	P38221	457 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	CCZ1	P38273	704 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	TDP1	P38319	544 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	YDR089W	P38966	869 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	DSS1	P39112	969 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	RSP5	P39940	809 aa	Known RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	GTT1	P40582	234 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	ALR2	P43553	858 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	COX16	P47081	118 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	ATP22	P50273	684 aa	Predicted RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	YGR021W	P53212	290 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	GTF1	P53260	183 aa	Predicted RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	ZRG17	P53735	605 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	GOR1	P53839	350 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	DID2	P69771	204 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	RMI1	Q02685	241 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	REC102	Q02721	264 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	SLU7	Q02775	382 aa	Known RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	UBP16	Q02863	499 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	EBS1	Q03466	884 aa	Known RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	ACL4	Q03771	387 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	BUD22	Q04347	519 aa	Known RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	BRE4	Q07660	1125 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	RAX1	Q08760	435 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	SNX3	Q08826	162 aa	Known RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	TAH18	Q12181	623 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	LDB17	Q12342	491 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	NBL1	Q3E7Y6	73 aa		4.58	□□□□□ -1.68
TFB3	YDR460W	DUR1,2	P32528	1835 aa	Known RBP	4.58	□□□□□ -1.68
TFB3	YDR460W	CYC7	P00045	113 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	TRP3	P00937	484 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	SNF1	P06782	633 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	GCD1	P09032	578 aa	Predicted RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	FBP1	P09201	348 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	CDC24	P11433	854 aa	Predicted RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	WHI2	P12611	486 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	STE12	P13574	688 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	GFA1	P14742	717 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	CDC23	P16522	626 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	HPR1	P17629	752 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	LCB1	P25045	558 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	GFD2	P25370	566 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	PRO1	P32264	428 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	MEI5	P32489	222 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	PET309	P32522	965 aa	Predicted RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	GYP6	P32806	458 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	CUE2	P36075	443 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	NOP4	P37838	685 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	ARA1	P38115	344 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	KAP104	P38217	918 aa	Known RBP	4.57	□□□□□ -1.68
TFB3	YDR460W	CST26	P38226	397 aa		4.57	□□□□□ -1.68
TFB3	YDR460W	YBR138C	P38277	524 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms