RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	YLL007C	Q07799	665 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	YDL176W	Q12027	708 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	NUR1	Q12066	484 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	HUA2	Q12134	243 aa		5.78	□□□□□ -1.48
SUB2	YDL084W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.78	□□□□□ -1.48	not detected
SUB2	YDL084W	ATP6	P00854	259 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	SCEI	P03882	235 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	CAN1	P04817	590 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	CHO2	P05374	869 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	YMR085W	P0CF18	432 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	RPL4A	P10664	362 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	PCK1	P10963	549 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	PFK1	P16861	987 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	HOP1	P20050	605 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	CIN8	P27895	1000 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	FUN26	P31381	517 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	KAP122	P32767	1081 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	KKQ8	P36004	724 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	ELF1	P36053	145 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	APE3	P37302	537 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.77	□□□□□ -1.49	not detected
SUB2	YDL084W	FIG1	P38224	298 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	IMD2	P38697	523 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	FMO1	P38866	432 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	YEL068C	P39977	110 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	MRX1	P40050	688 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	LTP1	P40347	161 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	QDR1	P40475	563 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	CTK3	P46963	296 aa	Predicted RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	RPS7B	P48164	190 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	RPL4B	P49626	362 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	MRK1	P50873	501 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	RPT4	P53549	437 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	CNM67	P53865	581 aa	Known RBP	5.77	□□□□□ -1.49
SUB2	YDL084W	DIA1	P54005	336 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	MPS1	P54199	764 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	PET117	Q02771	107 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	YMR010W	Q03687	405 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	AIM32	Q04689	311 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	TFC6	Q06339	672 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	OPI10	Q08202	246 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	UIP4	Q08926	304 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	ATG9	Q12142	997 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	NSI1	Q12457	570 aa		5.77	□□□□□ -1.49
SUB2	YDL084W	RPO41	P13433	1351 aa	Known RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	AUS1	Q08409	1394 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	STE2	D6VTK4	431 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	MSF1	P08425	469 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	MSS18	P08593	268 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	ADP1	P25371	1049 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	URA7	P28274	579 aa	Known RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	SPT10	P35208	640 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	MCD4	P36051	919 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	POA1	P38218	177 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	SPP381	P38282	291 aa	Predicted RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	PCM1	P38628	557 aa	Known RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	BZZ1	P38822	633 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	ALK1	P43633	760 aa	Known RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	RTT101	P47050	842 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	YJR154W	P47181	346 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	ARI1	P53111	347 aa	Known RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	TWF1	P53250	332 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	COS6	P53344	381 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	SLD5	Q03406	294 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	NHP10	Q03435	203 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	RUB1	Q03919	77 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	PPM1	Q04081	328 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	MFB1	Q04922	465 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	MSC3	Q05812	728 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	ERF2	Q06551	359 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	HDA3	Q06623	655 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	WHI4	Q07655	649 aa	Known RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	SDO1	Q07953	250 aa	Known RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	YAP7	Q08182	245 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	FYV7	Q12247	151 aa		5.76	□□□□□ -1.49
SUB2	YDL084W	RPN5	Q12250	445 aa	Known RBP	5.76	□□□□□ -1.49
SUB2	YDL084W	TUB2	P02557	457 aa	Known RBP	5.75	□□□□□ -1.49
SUB2	YDL084W	CDC9	P04819	755 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	RNR2	P09938	399 aa	Known RBP	5.75	□□□□□ -1.49
SUB2	YDL084W	HMG2	P12684	1045 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	PMR1	P13586	950 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	CKI1	P20485	582 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	RIT1	P23796	513 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	CAM1	P29547	415 aa	Known RBP	5.75	□□□□□ -1.49
SUB2	YDL084W	GSH1	P32477	678 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	BOL3	P39724	118 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	YAT2	P40017	923 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	TFG2	P41896	400 aa	Predicted RBP	5.75	□□□□□ -1.49
SUB2	YDL084W	FIG4	P42837	879 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	CAF16	P43569	289 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	MRM2	P53123	320 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	SLD3	P53135	668 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	TNA1	P53322	534 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	PDR16	P53860	351 aa	Known RBP	5.75	□□□□□ -1.49
SUB2	YDL084W	ADE16	P54113	591 aa	Known RBP	5.75	□□□□□ -1.49
SUB2	YDL084W	NUP116	Q02630	1113 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	ISU1	Q03020	165 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	MMT1	Q03218	510 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	SNX41	Q04053	625 aa		5.75	□□□□□ -1.49
SUB2	YDL084W	BUD22	Q04347	519 aa	Known RBP	5.75	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms