RNA–Protein interactions for RNA: YDL074C

BRE1, Transcript of E3 ubiquitin ligase, yeastyeast

Gene BRE1, Length 2,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE1YDL074C TEP1P53916 434 aa2.1□□□□□ -2.07
BRE1YDL074C ADE12P80210 433 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C IRC15Q02733 499 aa2.1□□□□□ -2.07
BRE1YDL074C YPL034WQ03083 165 aa2.1□□□□□ -2.07
BRE1YDL074C SRL4Q03085 281 aa2.1□□□□□ -2.07
BRE1YDL074C ATP25Q03153 612 aa2.1□□□□□ -2.07
BRE1YDL074C YMR155WQ03795 547 aa2.1□□□□□ -2.07
BRE1YDL074C ARA2Q04212 335 aa2.1□□□□□ -2.07
BRE1YDL074C AGE1Q04412 482 aa2.1□□□□□ -2.07
BRE1YDL074C ECM38Q05902 660 aaPredicted RBP2.1□□□□□ -2.07
BRE1YDL074C ECM30Q06673 1274 aa2.1□□□□□ -2.07
BRE1YDL074C COS7Q07788 383 aa2.1□□□□□ -2.07
BRE1YDL074C SGT1Q08446 395 aa2.1□□□□□ -2.07
BRE1YDL074C DIA2Q08496 732 aaPredicted RBP2.1□□□□□ -2.07
BRE1YDL074C CLP1Q08685 445 aaPredicted RBP2.1□□□□□ -2.07
BRE1YDL074C TRE2Q08693 809 aa2.1□□□□□ -2.07
BRE1YDL074C TMA46Q12000 345 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C YOR012WQ12351 137 aa2.1□□□□□ -2.07
BRE1YDL074C RIB2Q12362 591 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C CMR1Q12510 522 aaKnown RBP2.1□□□□□ -2.07
BRE1YDL074C YDR524C-BQ3E6R4 66 aa2.1□□□□□ -2.07
BRE1YDL074C THP2O13539 261 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C COX5AP00424 153 aa2.09□□□□□ -2.07
BRE1YDL074C ENO1P00924 437 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C AI3P03877 415 aa2.09□□□□□ -2.07
BRE1YDL074C BCY1P07278 416 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C SST2P11972 698 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C ATR1P13090 542 aa2.09□□□□□ -2.07
BRE1YDL074C TOP3P13099 656 aa2.09□□□□□ -2.07
BRE1YDL074C FBA1P14540 359 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C NSP1P14907 823 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C IDI1P15496 288 aa2.09□□□□□ -2.07
BRE1YDL074C CLN1P20437 546 aa2.09□□□□□ -2.07
BRE1YDL074C UBA1P22515 1024 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C VPS34P22543 875 aa2.09□□□□□ -2.07
BRE1YDL074C SGF29P25554 259 aa2.09□□□□□ -2.07
BRE1YDL074C ADK2P26364 225 aa2.09□□□□□ -2.07
BRE1YDL074C GUT2P32191 649 aa2.09□□□□□ -2.07
BRE1YDL074C KAR9P32526 644 aa2.09□□□□□ -2.07
BRE1YDL074C PEX2P32800 271 aa2.09□□□□□ -2.07
BRE1YDL074C RPS1AP33442 255 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C SKT5P34226 696 aa2.09□□□□□ -2.07
BRE1YDL074C AST1P35183 429 aa2.09□□□□□ -2.07
BRE1YDL074C VPS21P36017 210 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C YPT52P36018 234 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C FRE2P36033 711 aa2.09□□□□□ -2.07
BRE1YDL074C YKR015CP36111 568 aa2.09□□□□□ -2.07
BRE1YDL074C GRS1P38088 690 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C APM3P38153 483 aa2.09□□□□□ -2.07
BRE1YDL074C FTH1P38310 465 aa2.09□□□□□ -2.07
BRE1YDL074C URA8P38627 578 aaPredicted RBP2.09□□□□□ -2.07
BRE1YDL074C MSC7P38694 644 aa2.09□□□□□ -2.07
BRE1YDL074C TDA11P38854 504 aa2.09□□□□□ -2.07
BRE1YDL074C DSS1P39112 969 aa2.09□□□□□ -2.07
BRE1YDL074C FAA2P39518 744 aa2.09□□□□□ -2.07
BRE1YDL074C RPH1P39956 796 aa2.09□□□□□ -2.07
BRE1YDL074C RIC1P40395 1056 aa2.09□□□□□ -2.07
BRE1YDL074C IMA5P40884 581 aa2.09□□□□□ -2.07
BRE1YDL074C OPT1P40897 799 aa2.09□□□□□ -2.07
BRE1YDL074C LSB6P42951 607 aa2.09□□□□□ -2.07
BRE1YDL074C YFL066CP43538 392 aa2.09□□□□□ -2.07
BRE1YDL074C YFR018CP43599 363 aa2.09□□□□□ -2.07
BRE1YDL074C SNG1P46950 547 aa2.09□□□□□ -2.07
BRE1YDL074C NOP9P47077 666 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C UPF3P48412 387 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C ASN2P49090 572 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C FOL2P51601 243 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C DIA3P52290 468 aa2.09□□□□□ -2.07
BRE1YDL074C CLD1P53264 445 aa2.09□□□□□ -2.07
BRE1YDL074C UTP8P53276 713 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C GPI1P53306 609 aa2.09□□□□□ -2.07
BRE1YDL074C GOR1P53839 350 aa2.09□□□□□ -2.07
BRE1YDL074C TGL2P54857 326 aa2.09□□□□□ -2.07
BRE1YDL074C PRP38Q00723 242 aaPredicted RBP2.09□□□□□ -2.07
BRE1YDL074C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.09□□□□□ -2.07not detected
BRE1YDL074C NUP100Q02629 959 aa2.09□□□□□ -2.07
BRE1YDL074C RMI1Q02685 241 aa2.09□□□□□ -2.07
BRE1YDL074C YML131WQ03102 365 aa2.09□□□□□ -2.07
BRE1YDL074C HEH2Q03281 663 aa2.09□□□□□ -2.07
BRE1YDL074C UGO1Q03327 502 aa2.09□□□□□ -2.07
BRE1YDL074C GCN5Q03330 439 aa2.09□□□□□ -2.07
BRE1YDL074C SPO71Q03868 1245 aa2.09□□□□□ -2.07
BRE1YDL074C CSN9Q03981 162 aa2.09□□□□□ -2.07
BRE1YDL074C HSP31Q04432 237 aa2.09□□□□□ -2.07
BRE1YDL074C RTN1Q04947 295 aaKnown RBP2.09□□□□□ -2.07
BRE1YDL074C BCH1Q05029 724 aa2.09□□□□□ -2.07
BRE1YDL074C MCP2Q06567 569 aa2.09□□□□□ -2.07
BRE1YDL074C VIK1Q12045 647 aa2.09□□□□□ -2.07
BRE1YDL074C ULA1Q12059 462 aa2.09□□□□□ -2.07
BRE1YDL074C NUS1Q12063 375 aa2.09□□□□□ -2.07
BRE1YDL074C IES3Q12345 250 aa2.09□□□□□ -2.07
BRE1YDL074C NKP1Q12493 238 aa2.09□□□□□ -2.07
BRE1YDL074C YMR030W-AQ3E760 96 aa2.09□□□□□ -2.07
BRE1YDL074C FRT1Q99332 602 aa2.09□□□□□ -2.07
BRE1YDL074C YLR422WQ06409 1932 aa2.09□□□□□ -2.07
BRE1YDL074C ATP6P00854 259 aa2.09□□□□□ -2.08
BRE1YDL074C ERG20P08524 352 aaKnown RBP2.09□□□□□ -2.08
BRE1YDL074C COS2P0CX12 379 aa2.09□□□□□ -2.08
BRE1YDL074C COS3P0CX13 379 aa2.09□□□□□ -2.08
BRE1YDL074C HMG2P12684 1045 aa2.09□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms