RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	CHO1	P08456	276 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	GPA1	P08539	472 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	YMR085W	P0CF18	432 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	FUR1	P18562	216 aa	Known RBP	3.19	□□□□□ -1.9
SRD1	YCR018C	SEF1	P34228	1148 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	UBP11	P36026	717 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	PXL1	P36166	706 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	MNN2	P38069	597 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	SCO2	P38072	301 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	ICS2	P38284	255 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	DBP8	P38719	431 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	UTP9	P38882	575 aa	Known RBP	3.19	□□□□□ -1.9
SRD1	YCR018C	TPA1	P40032	644 aa	Known RBP	3.19	□□□□□ -1.9
SRD1	YCR018C	VRG4	P40107	337 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	DOT5	P40553	215 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	IRC6	P43615	237 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	FAR3	P46671	204 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	VPS25	P47142	202 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	MAK10	Q02197	733 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	RSC9	Q03124	581 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	SYF1	Q04048	859 aa	Predicted RBP	3.19	□□□□□ -1.9
SRD1	YCR018C	EMI2	Q04409	500 aa	Known RBP	3.19	□□□□□ -1.9
SRD1	YCR018C	SWF1	Q04629	336 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	PIG1	Q06216	648 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	RRI1	Q12468	440 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	YPT6	Q99260	215 aa		3.19	□□□□□ -1.9
SRD1	YCR018C	RED1	P14291	827 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	KRS1	P15180	591 aa	Known RBP	3.18	□□□□□ -1.9
SRD1	YCR018C	CKA1	P15790	372 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	MBR1	P23493	339 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	STV1	P37296	890 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	SRO77	P38163	1010 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	RFC1	P38630	861 aa	Known RBP	3.18	□□□□□ -1.9
SRD1	YCR018C	ELO1	P39540	310 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	ALG5	P40350	334 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	XBP1	P40489	647 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	SPO22	P40511	975 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	ULP2	P40537	1034 aa	Predicted RBP	3.18	□□□□□ -1.9
SRD1	YCR018C	MAF1	P41910	395 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	SGM1	P47166	707 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	EFM6	P53970	246 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	RIM13	Q03792	727 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	VPS38	Q05919	439 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	ECM30	Q06673	1274 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	BUD7	Q08754	746 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	FRE3	Q08905	711 aa		3.18	□□□□□ -1.9
SRD1	YCR018C	FOB1	O13329	566 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	ARG81	P05085	880 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	MET17	P06106	444 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
SRD1	YCR018C	RPB8	P20436	146 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	CNA1	P23287	553 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	PTP1	P25044	335 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	STE50	P25344	346 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	IMG1	P25626	169 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	SSE2	P32590	693 aa	Known RBP	3.17	□□□□□ -1.9
SRD1	YCR018C	YBR144C	P34215	104 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	TSC10	P38342	320 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	FLO5	P38894	1075 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	VTC2	P43585	828 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	YTP1	P53584	459 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	COP1	P53622	1201 aa	Known RBP	3.17	□□□□□ -1.9
SRD1	YCR018C	IPI3	P53877	555 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	TAF11	Q04226	346 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	MCP2	Q06567	569 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	GRC3	Q07845	632 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	TEN1	Q07921	160 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	YOL159C	Q08300	171 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	RIM20	Q12033	661 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	RRG1	Q12167	365 aa	Predicted RBP	3.17	□□□□□ -1.9
SRD1	YCR018C	CRC1	Q12289	327 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	AVL9	Q12500	764 aa		3.17	□□□□□ -1.9
SRD1	YCR018C	GAL80	P04387	435 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	PDA1	P16387	420 aa	Known RBP	3.16	□□□□□ -1.9
SRD1	YCR018C	YAP1	P19880	650 aa	Known RBP	3.16	□□□□□ -1.9
SRD1	YCR018C	BOS1	P25385	244 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	MUM2	P38236	366 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	ANS1	P38832	159 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	YIL024C	P40543	189 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	CFD1	P40558	293 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	PSA1	P41940	361 aa	Known RBP	3.16	□□□□□ -1.9
SRD1	YCR018C	ERG26	P53199	349 aa	Known RBP	3.16	□□□□□ -1.9
SRD1	YCR018C	ASI1	P54074	624 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	YDR239C	Q03780	787 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	UTP21	Q06078	939 aa	Predicted RBP	3.16	□□□□□ -1.9
SRD1	YCR018C	CDC45	Q08032	650 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	ETT1	Q08421	412 aa	Known RBP	3.16	□□□□□ -1.9
SRD1	YCR018C	YPL272C	Q08984	517 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	SCM3	Q12334	223 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	SFI1	Q12369	946 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	SGS1	P35187	1447 aa		3.16	□□□□□ -1.9
SRD1	YCR018C	KGD1	P20967	1014 aa	Known RBP	3.15	□□□□□ -1.91
SRD1	YCR018C	CLB2	P24869	491 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	PUP3	P25451	205 aa	Known RBP	3.15	□□□□□ -1.91
SRD1	YCR018C	YUR1	P26725	428 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	MIA40	P36046	403 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	TCD2	P36101	447 aa	Known RBP	3.15	□□□□□ -1.91
SRD1	YCR018C	CST26	P38226	397 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	VPS41	P38959	992 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	CCT6	P39079	546 aa		3.15	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms