RNA–Protein interactions for RNA: YBR295W

PCA1, Transcript of Cadmium transporting P-type ATPase, yeast

Gene PCA1, Length 3,651 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCA1	YBR295W	SHM1	P37292	490 aa	Predicted RBP	4.65	□□□□□ -1.67
PCA1	YBR295W	LEU5	P38702	357 aa		4.65	□□□□□ -1.67
PCA1	YBR295W	ALG8	P40351	577 aa		4.65	□□□□□ -1.67
PCA1	YBR295W	YRB2	P40517	327 aa		4.65	□□□□□ -1.67
PCA1	YBR295W	HXT14	P42833	540 aa		4.65	□□□□□ -1.67
PCA1	YBR295W	RPC17	P47076	161 aa		4.65	□□□□□ -1.67
PCA1	YBR295W	LYS20	P48570	428 aa	Known RBP	4.65	□□□□□ -1.67
PCA1	YBR295W	PPT1	P53043	513 aa		4.65	□□□□□ -1.67
PCA1	YBR295W	ASI2	P53895	289 aa		4.65	□□□□□ -1.67
PCA1	YBR295W	UTP5	Q04177	643 aa	Known RBP	4.65	□□□□□ -1.67
PCA1	YBR295W	GSF2	Q04697	403 aa	Known RBP	4.65	□□□□□ -1.67
PCA1	YBR295W	CDA1	Q06702	301 aa		4.65	□□□□□ -1.67
PCA1	YBR295W	BNR1	P40450	1375 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	INH1	P01097	85 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	AAC3	P18238	307 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	KGD1	P20967	1014 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	ATP12	P22135	325 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	HRR25	P29295	494 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	CCR4	P31384	837 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	DAL3	P32459	195 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	SCO2	P38072	301 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	MMS4	P38257	691 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	DIA4	P38705	446 aa	Predicted RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	EFM1	P38732	585 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	UBP9	P39967	754 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	SOK1	P40317	901 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	DOT5	P40553	215 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	NUT1	P53114	1132 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	ERG5	P54781	538 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	RSN1	Q03516	953 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	GIM5	Q04493	163 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	ARO10	Q06408	635 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	CWC2	Q12046	339 aa	Predicted RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	DCS2	Q12123	353 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	HAL9	Q12180	1030 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	YOR019W	Q99248	730 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	ATR1	P13090	542 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	CLN3	P13365	580 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	FUS3	P16892	353 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	FUR1	P18562	216 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	MIH1	P23748	554 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	SYP1	P25623	870 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	SUI1	P32911	108 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	SEC61	P32915	480 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	NTR2	P36118	322 aa	Predicted RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	MRPL37	P36532	105 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	PDX3	P38075	228 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	SIF2	P38262	535 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	NVJ1	P38881	321 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	EMW1	P42842	904 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	FET5	P43561	622 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	YJR030C	P47101	745 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	USE1	P53146	245 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	SNF12	P53628	566 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	CBK1	P53894	756 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	YDC1	Q02896	317 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	HBT1	Q07653	1046 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	UAF30	Q08747	228 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	KEL3	Q08979	651 aa	Predicted RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	ZRT2	Q12436	422 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	GAL10	P04397	699 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	COR1	P07256	457 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	RPS18A	P0CX55	146 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	RPS18B	P0CX56	146 aa	Predicted RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	MATALPHA1	P0CY06	175 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	HMLALPHA1	P0CY07	175 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	CHL1	P22516	861 aa	Predicted RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	TSA1	P34760	196 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	YBR238C	P38330	731 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	RRP3	P38712	501 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	LYS9	P38999	446 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	SEN34	P39707	275 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	GTT1	P40582	234 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	YNL320W	P42840	284 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	YGR012W	P53206	393 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	APP1	P53933	587 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	SED5	Q01590	340 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	MUK1	Q02866	612 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	RRP42	Q12277	265 aa	Predicted RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	PNO1	Q99216	274 aa	Known RBP	4.64	□□□□□ -1.67
PCA1	YBR295W	SAS5	Q99314	248 aa		4.64	□□□□□ -1.67
PCA1	YBR295W	TUB1	P09733	447 aa	Known RBP	4.63	□□□□□ -1.67
PCA1	YBR295W	WHI2	P12611	486 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	ARO3	P14843	370 aa	Known RBP	4.63	□□□□□ -1.67
PCA1	YBR295W	RGR1	P19263	1082 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	CCA1	P21269	546 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	PPG1	P32838	368 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	AIM3	P38266	947 aa	Known RBP	4.63	□□□□□ -1.67
PCA1	YBR295W	SSH1	P38353	490 aa	Known RBP	4.63	□□□□□ -1.67
PCA1	YBR295W	FHL1	P39521	936 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	ARF3	P40994	183 aa	RIP-Chip data	4.63	□□□□□ -1.67	RIP-Chip
PCA1	YBR295W	CCT7	P42943	550 aa	Known RBP	4.63	□□□□□ -1.67
PCA1	YBR295W	DLD2	P46681	530 aa	Known RBP	4.63	□□□□□ -1.67
PCA1	YBR295W	YDL183C	P48569	320 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	ADE16	P54113	591 aa	Known RBP	4.63	□□□□□ -1.67
PCA1	YBR295W	YDR541C	Q03049	344 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	SCS7	Q03529	384 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	REH1	Q06709	432 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	GYP1	Q08484	637 aa		4.63	□□□□□ -1.67
PCA1	YBR295W	HMG2	P12684	1045 aa		4.63	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms