RNA–Protein interactions for RNA: YBR253W

SRB6, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB6, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB6	YBR253W	RRT2	P38332	387 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	ERC1	P38767	581 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	YNG2	P38806	282 aa	Known RBP	4.89	□□□□□ -1.63
SRB6	YBR253W	RTT105	P40063	208 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	NAS2	P40555	220 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	BAP3	P41815	604 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	CAK1	P43568	368 aa	Predicted RBP	4.89	□□□□□ -1.63
SRB6	YBR253W	STR3	P53101	465 aa	Known RBP	4.89	□□□□□ -1.63
SRB6	YBR253W	FHN1	P53279	174 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	SNF12	P53628	566 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	YAP6	Q03935	383 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	CSI1	Q04368	295 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	APL4	Q12028	832 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	YLR122C	Q12312	125 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	PSY3	Q12318	242 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	PSK1	P31374	1356 aa		4.89	□□□□□ -1.63
SRB6	YBR253W	YML002W	P0CF17	737 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	RPS24A	P0CX31	135 aa	Known RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	RPS24B	P0CX32	135 aa	Known RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	RPL3	P14126	387 aa	Known RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	PDE1	P22434	369 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	SPB1	P25582	841 aa	Predicted RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	KAR4	P25583	335 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	PDB1	P32473	366 aa	Known RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	RIB7	P33312	244 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	CMC1	P36064	111 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	MNN2	P38069	597 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	AGP2	P38090	596 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
SRB6	YBR253W	DLD2	P46681	530 aa	Known RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	MPS3	P47069	682 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	NPA3	P47122	385 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	RPS7B	P48164	190 aa	Known RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	VID30	P53076	958 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	HST1	P53685	503 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	INA17	Q02888	182 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	KAP120	Q02932	1032 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	GRX3	Q03835	250 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	SOV1	Q04748	898 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	ATG23	Q06671	453 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	PML1	Q07930	204 aa	Predicted RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	IZH3	Q07959	543 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	YDL177C	Q12257	170 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	RRP36	Q12481	300 aa	Predicted RBP	4.88	□□□□□ -1.63
SRB6	YBR253W	AVL9	Q12500	764 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	YBR255C-A	Q3E776	120 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	YER175W-A	Q8TGU4	54 aa		4.88	□□□□□ -1.63
SRB6	YBR253W	HAP1	P0CE41	1502 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	CAD1	P24813	409 aa	Known RBP	4.87	□□□□□ -1.63
SRB6	YBR253W	PHO84	P25297	587 aa	Known RBP	4.87	□□□□□ -1.63
SRB6	YBR253W	CDC15	P27636	974 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	WBP1	P33767	430 aa	Known RBP	4.87	□□□□□ -1.63
SRB6	YBR253W	SEF1	P34228	1148 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	SDH8	P38345	138 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	REV7	P38927	245 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	BDH2	P39713	417 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	ICP55	P40051	511 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	HXT14	P42833	540 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	CCT7	P42943	550 aa	Known RBP	4.87	□□□□□ -1.63
SRB6	YBR253W	IMD4	P50094	524 aa	Known RBP	4.87	□□□□□ -1.63
SRB6	YBR253W	INP52	P50942	1183 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	YGR035C	P53222	116 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	TWF1	P53250	332 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	YNL050C	P53952	270 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	YAT1	P80235	687 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
SRB6	YBR253W	HEL2	Q05580	639 aa	Known RBP	4.87	□□□□□ -1.63
SRB6	YBR253W	SPH1	Q06160	661 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	CRN1	Q06440	651 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	YDL073W	Q07454	984 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	NOP12	Q08208	459 aa	Known RBP	4.87	□□□□□ -1.63
SRB6	YBR253W	FRE5	Q08908	694 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	BMS1	Q08965	1183 aa	Known RBP	4.87	□□□□□ -1.63
SRB6	YBR253W	RLM1	Q12224	676 aa		4.87	□□□□□ -1.63
SRB6	YBR253W	VMA16	P23968	213 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	NTH1	P32356	751 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	YEL043W	P32618	956 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	LTV1	P34078	463 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	TCD2	P36101	447 aa	Known RBP	4.86	□□□□□ -1.63
SRB6	YBR253W	DAD2	P36162	133 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	YSW1	P38280	609 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	LNP1	P38878	278 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	YIR042C	P40586	236 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	YFL066C	P43538	392 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	SWP82	P43554	623 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	YGR111W	P53265	400 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	YGR130C	P53278	816 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	ERG5	P54781	538 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	ORC3	P54790	616 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	DAK1	P54838	584 aa	Known RBP	4.86	□□□□□ -1.63
SRB6	YBR253W	VPS20	Q04272	221 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	DON1	Q05610	365 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	RBS1	Q05672	457 aa	Known RBP	4.86	□□□□□ -1.63
SRB6	YBR253W	MLH2	Q07980	695 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	YOR352W	Q08816	343 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	FMP40	Q08968	688 aa	Predicted RBP	4.86	□□□□□ -1.63
SRB6	YBR253W	RAD50	P12753	1312 aa		4.86	□□□□□ -1.63
SRB6	YBR253W	RPL1A	P0CX43	217 aa	Known RBP	4.85	□□□□□ -1.63
SRB6	YBR253W	RPL1B	P0CX44	217 aa	Known RBP	4.85	□□□□□ -1.63
SRB6	YBR253W	SNT1	P25357	1226 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms