RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W TMN2Q04562 672 aa2.22□□□□□ -2.05
SNC1YAL030W YLR345WQ06137 509 aa2.22□□□□□ -2.05
SNC1YAL030W THI3Q07471 609 aa2.22□□□□□ -2.05
SNC1YAL030W RTT109Q07794 436 aa2.22□□□□□ -2.05
SNC1YAL030W APL4Q12028 832 aa2.22□□□□□ -2.05
SNC1YAL030W MRH1Q12117 320 aaPredicted RBP2.22□□□□□ -2.05
SNC1YAL030W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SNC1YAL030W ISA2Q12425 185 aa2.22□□□□□ -2.05
SNC1YAL030W SEC39Q12745 709 aa2.22□□□□□ -2.05
SNC1YAL030W YOL159C-AQ3E769 90 aa2.22□□□□□ -2.05
SNC1YAL030W SGS1P35187 1447 aa2.22□□□□□ -2.05
SNC1YAL030W RTC1Q08281 1341 aa2.21□□□□□ -2.06
SNC1YAL030W PET111P08468 800 aa2.21□□□□□ -2.06
SNC1YAL030W KRS1P15180 591 aaKnown RBP2.21□□□□□ -2.06
SNC1YAL030W REC107P21651 314 aa2.21□□□□□ -2.06
SNC1YAL030W MAK32P23060 363 aa2.21□□□□□ -2.06
SNC1YAL030W CLB1P24868 471 aa2.21□□□□□ -2.06
SNC1YAL030W CLB2P24869 491 aa2.21□□□□□ -2.06
SNC1YAL030W BUD5P25300 642 aaPredicted RBP2.21□□□□□ -2.06
SNC1YAL030W SNT1P25357 1226 aa2.21□□□□□ -2.06
SNC1YAL030W IMG1P25626 169 aa2.21□□□□□ -2.06
SNC1YAL030W YBR144CP34215 104 aa2.21□□□□□ -2.06
SNC1YAL030W SAS3P34218 831 aa2.21□□□□□ -2.06
SNC1YAL030W YBL055CP34220 418 aaPredicted RBP2.21□□□□□ -2.06
SNC1YAL030W MNN2P38069 597 aa2.21□□□□□ -2.06
SNC1YAL030W FTH1P38310 465 aa2.21□□□□□ -2.06
SNC1YAL030W TSC10P38342 320 aa2.21□□□□□ -2.06
SNC1YAL030W EXO1P39875 702 aa2.21□□□□□ -2.06
SNC1YAL030W AFG3P39925 761 aa2.21□□□□□ -2.06
SNC1YAL030W YIL166CP40445 542 aa2.21□□□□□ -2.06
SNC1YAL030W SGN1P40561 250 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
SNC1YAL030W CDC1P40986 491 aa2.21□□□□□ -2.06
SNC1YAL030W SSU1P41930 458 aa2.21□□□□□ -2.06
SNC1YAL030W HXT14P42833 540 aa2.21□□□□□ -2.06
SNC1YAL030W YFR020WP43600 232 aa2.21□□□□□ -2.06
SNC1YAL030W DLD2P46681 530 aaKnown RBP2.21□□□□□ -2.06
SNC1YAL030W SAE2P46946 345 aa2.21□□□□□ -2.06
SNC1YAL030W IRC8P47046 822 aa2.21□□□□□ -2.06
SNC1YAL030W IMD4P50094 524 aaKnown RBP2.21□□□□□ -2.06
SNC1YAL030W LCL3P53153 274 aa2.21□□□□□ -2.06
SNC1YAL030W SGF73P53165 657 aa2.21□□□□□ -2.06
SNC1YAL030W GND2P53319 492 aa2.21□□□□□ -2.06
SNC1YAL030W ERO1Q03103 563 aa2.21□□□□□ -2.06
SNC1YAL030W DPB4Q04603 196 aaKnown RBP2.21□□□□□ -2.06
SNC1YAL030W ERB1Q04660 807 aaKnown RBP2.21□□□□□ -2.06
SNC1YAL030W YLR455WQ06188 304 aa2.21□□□□□ -2.06
SNC1YAL030W VTA1Q06263 330 aa2.21□□□□□ -2.06
SNC1YAL030W RLM1Q12224 676 aa2.21□□□□□ -2.06
SNC1YAL030W SEC3P33332 1336 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W SPT7P35177 1332 aa2.2□□□□□ -2.06
SNC1YAL030W BI2P03873 423 aa2.2□□□□□ -2.06
SNC1YAL030W GAL80P04387 435 aa2.2□□□□□ -2.06
SNC1YAL030W ADE5,7P07244 802 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W RAP1P11938 827 aa2.2□□□□□ -2.06
SNC1YAL030W PDA1P16387 420 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W EST1P17214 699 aaPredicted RBP2.2□□□□□ -2.06
SNC1YAL030W MDH1P17505 334 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
SNC1YAL030W ART10P18634 518 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W APN1P22936 367 aa2.2□□□□□ -2.06
SNC1YAL030W STE50P25344 346 aa2.2□□□□□ -2.06
SNC1YAL030W BOS1P25385 244 aa2.2□□□□□ -2.06
SNC1YAL030W AAD3P25612 363 aa2.2□□□□□ -2.06
SNC1YAL030W YCR051WP25631 222 aa2.2□□□□□ -2.06
SNC1YAL030W GAC1P28006 793 aa2.2□□□□□ -2.06
SNC1YAL030W URA7P28274 579 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W PAP1P29468 568 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W YMC1P32331 307 aa2.2□□□□□ -2.06
SNC1YAL030W SAC1P32368 623 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W PUP2P32379 260 aa2.2□□□□□ -2.06
SNC1YAL030W EMP70P32802 667 aa2.2□□□□□ -2.06
SNC1YAL030W TIF3P34167 436 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W YKL100CP34248 587 aa2.2□□□□□ -2.06
SNC1YAL030W GCS1P35197 352 aa2.2□□□□□ -2.06
SNC1YAL030W OCT1P35999 772 aa2.2□□□□□ -2.06
SNC1YAL030W MIA40P36046 403 aa2.2□□□□□ -2.06
SNC1YAL030W STB6P36085 766 aa2.2□□□□□ -2.06
SNC1YAL030W PIM1P36775 1133 aa2.2□□□□□ -2.06
SNC1YAL030W CIN4P39110 191 aa2.2□□□□□ -2.06
SNC1YAL030W LTP1P40347 161 aa2.2□□□□□ -2.06
SNC1YAL030W DOT5P40553 215 aa2.2□□□□□ -2.06
SNC1YAL030W YJL107CP42947 387 aa2.2□□□□□ -2.06
SNC1YAL030W BUD27P43573 796 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
SNC1YAL030W YJL043WP47053 257 aa2.2□□□□□ -2.06
SNC1YAL030W ORC5P50874 479 aa2.2□□□□□ -2.06
SNC1YAL030W HOS2P53096 452 aaPredicted RBP2.2□□□□□ -2.06
SNC1YAL030W ERG26P53199 349 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W YPR003CP53394 754 aa2.2□□□□□ -2.06
SNC1YAL030W OGG1P53397 376 aaPredicted RBP2.2□□□□□ -2.06
SNC1YAL030W RPA49Q01080 415 aaPredicted RBP2.2□□□□□ -2.06
SNC1YAL030W KAP120Q02932 1032 aa2.2□□□□□ -2.06
SNC1YAL030W YDR239CQ03780 787 aa2.2□□□□□ -2.06
SNC1YAL030W SOV1Q04748 898 aa2.2□□□□□ -2.06
SNC1YAL030W BSP1Q06604 576 aa2.2□□□□□ -2.06
SNC1YAL030W IRC10Q08118 586 aa2.2□□□□□ -2.06
SNC1YAL030W RDL1Q12305 139 aaKnown RBP2.2□□□□□ -2.06
SNC1YAL030W YDL007C-AQ2V2Q0 85 aa2.2□□□□□ -2.06
SNC1YAL030W ISN1Q99312 450 aa2.2□□□□□ -2.06
SNC1YAL030W GPA1P08539 472 aa2.19□□□□□ -2.06
SNC1YAL030W AQY1P0CD91 305 aa2.19□□□□□ -2.06
SNC1YAL030W MRP13P12686 339 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 59.8 ms