RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 EGFRP00533 1210 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 CASTP20810 708 aaKnown RBP9.36□□□□□ -0.91
SCARB2-220ENST00000640076 CACNB3P54284 484 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 PPARAQ07869 468 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 FUT2Q10981 343 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 NFIAQ12857 509 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 COL9A3Q14050 684 aaPredicted RBP9.36□□□□□ -0.91
SCARB2-220ENST00000640076 IDI2Q9BXS1 227 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 UPF3BQ9BZI7 483 aaKnown RBP9.36□□□□□ -0.91
SCARB2-220ENST00000640076 SPC25Q9HBM1 224 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 ZSWIM6Q9HCJ5 1215 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 GABBR1Q9UBS5 961 aa9.36□□□□□ -0.91
SCARB2-220ENST00000640076 WNT10BO00744 389 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 CYP2D6P10635 497 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 CPA1P15085 419 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 PSMA5P28066 241 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 EVX2Q03828 476 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 PICALMQ13492 652 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 ZNF394Q53GI3 561 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 C12orf60Q5U649 245 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 APBB1IPQ7Z5R6 666 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-220ENST00000640076 TPCN2Q8NHX9 752 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 STAG1Q8WVM7 1258 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 SECISBP2LQ93073 1101 aaKnown RBP9.35□□□□□ -0.91
SCARB2-220ENST00000640076 COL26A1Q96A83 441 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 NEK1Q96PY6 1258 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 HINFPQ9BQA5 517 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 DDX56Q9NY93 547 aaKnown RBP9.35□□□□□ -0.91
SCARB2-220ENST00000640076 SAP30BPQ9UHR5 308 aaKnown RBP9.35□□□□□ -0.91
SCARB2-220ENST00000640076 H7C1D1 291 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 IGHA2P01877 340 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 PTMAP06454 111 aaKnown RBP9.35□□□□□ -0.91
SCARB2-220ENST00000640076 NEK4P51957 841 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 NBPF9Q3BBW0 867 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 AKNAD1Q5T1N1 836 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 BLOC1S2Q6QNY1 142 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 RUFY3Q7L099 469 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 SAMD7Q7Z3H4 446 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 PACS2Q86VP3 889 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 DMRTB1Q96MA1 342 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 OSBPL5Q9H0X9 879 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-220ENST00000640076 CYLDQ9NQC7 956 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 ZNF70Q9UC06 446 aaPredicted RBP9.35□□□□□ -0.91
SCARB2-220ENST00000640076 CYP46A1Q9Y6A2 500 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 TACC3Q9Y6A5 838 aa9.35□□□□□ -0.91
SCARB2-220ENST00000640076 ROBO3Q96MS0 1386 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 CLRN2A0PK11 232 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 K7ELQ4 463 aaPredicted RBP9.34□□□□□ -0.91
SCARB2-220ENST00000640076 MYO1BO43795 1136 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 CD2BP2O95400 341 aaKnown RBP9.34□□□□□ -0.91
SCARB2-220ENST00000640076 POLR3DP05423 398 aaPredicted RBP9.34□□□□□ -0.91
SCARB2-220ENST00000640076 RPS6KB1P23443 525 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 EPS15P42566 896 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 PLCD1P51178 756 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 KIF4BQ2VIQ3 1234 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 SLC4A8Q2Y0W8 1093 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 TBC1D10BQ4KMP7 808 aaPredicted RBP9.34□□□□□ -0.91
SCARB2-220ENST00000640076 FKBP1CQ5VVH2 108 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 MFSD6Q6ZSS7 791 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 ZFPM1Q8IX07 1006 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 AMOTL1Q8IY63 956 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 TTC14Q96N46 770 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 PURBQ96QR8 312 aaKnown RBP9.34□□□□□ -0.91
SCARB2-220ENST00000640076 INCENPQ9NQS7 918 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 TMOD2Q9NZR1 351 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 NAP1L2Q9ULW6 460 aaPredicted RBP9.34□□□□□ -0.91
SCARB2-220ENST00000640076 G3BP2Q9UN86 482 aaKnown RBP9.34□□□□□ -0.91
SCARB2-220ENST00000640076 PCDHB9Q9Y5E1 797 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 PCDHGB7Q9Y5F8 929 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 NEDD4P46934 1319 aa9.34□□□□□ -0.91
SCARB2-220ENST00000640076 SMAPO00193 183 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 ST18O60284 1047 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 ENTPD3O75355 529 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 S100BP04271 92 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 PCP11498 1178 aaKnown RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 ATP2B2Q01814 1243 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 TCP10Q12799 353 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 TRDNQ13061 729 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 NAA30Q147X3 362 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 RALYLQ86SE5 291 aaKnown RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 MB21D2Q8IYB1 491 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 STK11IPQ8N1F8 1099 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 NCOA7Q8NI08 942 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 SNX21Q969T3 373 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 RNF41Q9H4P4 317 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 CNNM2Q9H8M5 875 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 GPSM3Q9Y4H4 160 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 COL2A1P02458 1487 aaPredicted RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 SLC3A2P08195 630 aaKnown RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 DHX32Q7L7V1 743 aaKnown RBP9.33□□□□□ -0.92
SCARB2-220ENST00000640076 TTC6Q86TZ1 520 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 NKX2-3Q8TAU0 364 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 TRPM4Q8TD43 1214 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 CNTNAP1P78357 1384 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 ATRNL1Q5VV63 1379 aa9.33□□□□□ -0.92
SCARB2-220ENST00000640076 ASTN2O75129 1339 aaPredicted RBP9.32□□□□□ -0.92
SCARB2-220ENST00000640076 SIPA1L1O43166 1804 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 GLTPD2A6NH11 291 aa9.32□□□□□ -0.92
SCARB2-220ENST00000640076 B4E1Z4 1266 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms