RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 SEC61A2Q9H9S3 476 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 ERVK13-1Q9NX77 482 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 WTIPA6NIX2 430 aaPredicted RBP0.78□□□□□ -2.28
CCDC7-215ENST00000639629 PLA2G1BP04054 148 aaKnown RBP0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SYN1P17600 705 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 CYP7A1P22680 504 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 LINC00310P59036 64 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 ADAM17P78536 824 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 HNRNPUQ00839 825 aaKnown RBP eCLIP0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SLC35F1Q5T1Q4 408 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 E4F1Q66K89 784 aaPredicted RBP0.78□□□□□ -2.28
CCDC7-215ENST00000639629 FBXL19Q6PCT2 694 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 KRT25Q7Z3Z0 450 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 PPFIBP1Q86W92 1011 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 Q8N1X5 172 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 ZNF503Q96F45 646 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 MEGF9Q9H1U4 602 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 TRIT1Q9H3H1 467 aaKnown RBP0.78□□□□□ -2.28
CCDC7-215ENST00000639629 ADAMTS1Q9UHI8 967 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 PCDHB5Q9Y5E4 795 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 CACNA1AO00555 2505 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 KCNAB3O43448 404 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 CDK8P49336 464 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SLURP1P55000 103 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 RNF4P78317 190 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 FANCCQ00597 558 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 CAMK2GQ13555 558 aaPredicted RBP0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SLC9A5Q14940 896 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 KCNA10Q16322 511 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 RALGPS1Q5JS13 557 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SFRP5Q5T4F7 317 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 PAQR3Q6TCH7 311 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 NXPE4Q6UWF7 544 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 OTOP1Q7RTM1 612 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 REC114Q7Z4M0 266 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SPATA3Q8NHX4 192 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 CFHR4Q92496 578 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 MKL1Q969V6 931 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SETDB2Q96T68 719 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SEMA4AQ9H3S1 761 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 PRDM5Q9NQX1 630 aaPredicted RBP0.78□□□□□ -2.28
CCDC7-215ENST00000639629 GTF3C3Q9Y5Q9 886 aa0.78□□□□□ -2.28
CCDC7-215ENST00000639629 SHISA3A0PJX4 238 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 ZNF28P17035 718 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 MVKQ03426 396 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 RBL2Q08999 1139 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 AOC3Q16853 763 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 LARP7Q4G0J3 582 aaKnown RBP eCLIP0.78□□□□□ -2.29
CCDC7-215ENST00000639629 PI16Q6UXB8 463 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 SHDQ96IW2 340 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 EPN3Q9H201 632 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 SPG7Q9UQ90 795 aa0.78□□□□□ -2.29
CCDC7-215ENST00000639629 RBM19Q9Y4C8 960 aaKnown RBP0.78□□□□□ -2.29
CCDC7-215ENST00000639629 PLATP00750 562 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 CELA3AP09093 270 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 IMPDH2P12268 514 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 KCNA6P17658 529 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 POU3F2P20265 443 aaPredicted RBP0.77□□□□□ -2.29
CCDC7-215ENST00000639629 GRK4P32298 578 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 RAP1GAPP47736 663 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 MECP2P51608 486 aaKnown RBP0.77□□□□□ -2.29
CCDC7-215ENST00000639629 CACNB2Q08289 660 aaPredicted RBP0.77□□□□□ -2.29
CCDC7-215ENST00000639629 METTL24Q5JXM2 366 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 TRIM68Q6AZZ1 485 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 GALNT18Q6P9A2 607 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 FAM129CQ86XR2 697 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 TOP6BLQ8N6T0 577 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 DLG3Q92796 817 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 KIRREL1Q96J84 757 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 SEC16BQ96JE7 1060 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 NIF3L1Q9GZT8 377 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 KATNBL1Q9H079 304 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 CYR61O00622 381 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 CBFA2T2O43439 604 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 GSNP06396 782 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 ATF2P15336 505 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 DLG4P78352 724 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 LACTBP83111 547 aaPredicted RBP0.77□□□□□ -2.29
CCDC7-215ENST00000639629 CDK5R2Q13319 367 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 TMEM67Q5HYA8 995 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 CYP2R1Q6VVX0 501 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 RETREG2Q8NC44 543 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 KRTAP2-2Q9BYT5 123 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 BSNQ9UPA5 3926 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 KRTAP23-1A1A580 65 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 MATN3O15232 486 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 SUV39H1O43463 412 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 CYBBP04839 570 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 DBHP09172 617 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 SERPINB4P48594 390 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 DNM1Q05193 864 aaKnown RBP0.77□□□□□ -2.29
CCDC7-215ENST00000639629 TTBK2Q6IQ55 1244 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 TXNDC11Q6PKC3 985 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 PRR23BQ6ZRT6 265 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 LENG9Q96B70 501 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 SIGLEC10Q96LC7 697 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 ZFYVE21Q9BQ24 234 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 LACRTQ9GZZ8 138 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 RNF32Q9H0A6 362 aa0.77□□□□□ -2.29
CCDC7-215ENST00000639629 AURKAO14965 403 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms