RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-215ENST00000639629 AEBP2Q6ZN18 517 aaPredicted RBP4.76□□□□□ -1.65
CCDC7-215ENST00000639629 CHIC1Q5VXU3 224 aa4.5□□□□□ -1.69
CCDC7-215ENST00000639629 POTEDQ86YR6 584 aa4.44□□□□□ -1.7
CCDC7-215ENST00000639629 PHF23Q9BUL5 403 aaPredicted RBP3.97□□□□□ -1.77
CCDC7-215ENST00000639629 SENP3Q9H4L4 574 aaPredicted RBP3.96□□□□□ -1.77
CCDC7-215ENST00000639629 FOXD1Q16676 465 aa3.71□□□□□ -1.81
CCDC7-215ENST00000639629 DNAJC5BQ9UF47 199 aa3.66□□□□□ -1.82
CCDC7-215ENST00000639629 MSH5O43196 834 aa3.5□□□□□ -1.85
CCDC7-215ENST00000639629 PLPPR3Q6T4P5 718 aa3.44□□□□□ -1.86
CCDC7-215ENST00000639629 PPP6R1Q9UPN7 881 aa3.44□□□□□ -1.86
CCDC7-215ENST00000639629 DMRT2Q9Y5R5 561 aa3.27□□□□□ -1.89
CCDC7-215ENST00000639629 ADRA2BP18089 450 aa3.24□□□□□ -1.89
CCDC7-215ENST00000639629 HOXD11P31277 338 aaPredicted RBP3.23□□□□□ -1.89
CCDC7-215ENST00000639629 PIAS4Q8N2W9 510 aaPredicted RBP3.21□□□□□ -1.9
CCDC7-215ENST00000639629 POTEHQ6S545 545 aa3.12□□□□□ -1.91
CCDC7-215ENST00000639629 RNF216Q9NWF9 866 aaPredicted RBP3.1□□□□□ -1.91
CCDC7-215ENST00000639629 RNF39Q9H2S5 420 aa3.08□□□□□ -1.92
CCDC7-215ENST00000639629 MAPK8IP2Q13387 824 aaPredicted RBP3.04□□□□□ -1.92
CCDC7-215ENST00000639629 CNKSR2Q8WXI2 1034 aa3.02□□□□□ -1.93
CCDC7-215ENST00000639629 SCAF1Q9H7N4 1312 aaKnown RBP3.01□□□□□ -1.93
CCDC7-215ENST00000639629 C1QBPQ07021 282 aaKnown RBP2.98□□□□□ -1.93
CCDC7-215ENST00000639629 PPP4R3CPQ6ZMV5 832 aa2.97□□□□□ -1.93
CCDC7-215ENST00000639629 NPM3O75607 178 aaKnown RBP2.86□□□□□ -1.95
CCDC7-215ENST00000639629 PCDH10Q9P2E7 1040 aa2.86□□□□□ -1.95
CCDC7-215ENST00000639629 CACNB1Q02641 598 aaPredicted RBP2.85□□□□□ -1.95
CCDC7-215ENST00000639629 SLC4A2P04920 1241 aa2.84□□□□□ -1.96
CCDC7-215ENST00000639629 U3KPZ7 1027 aaPredicted RBP2.8□□□□□ -1.96
CCDC7-215ENST00000639629 DSG3P32926 999 aa2.79□□□□□ -1.96
CCDC7-215ENST00000639629 NCBP3Q53F19 620 aaKnown RBP2.79□□□□□ -1.96
CCDC7-215ENST00000639629 ATXN8OSP0DMR3 200 aa2.73□□□□□ -1.97
CCDC7-215ENST00000639629 PROM2Q8N271 834 aa2.65□□□□□ -1.99
CCDC7-215ENST00000639629 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP2.64□□□□□ -1.99
CCDC7-215ENST00000639629 KCNA4P22459 653 aa2.64□□□□□ -1.99
CCDC7-215ENST00000639629 FXR2P51116 673 aaKnown RBP eCLIP2.64□□□□□ -1.99
CCDC7-215ENST00000639629 HNRNPUL2Q1KMD3 747 aaKnown RBP2.64□□□□□ -1.99
CCDC7-215ENST00000639629 SPINK5Q9NQ38 1064 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-215ENST00000639629 MYCNP04198 464 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-215ENST00000639629 APLP2Q06481 763 aa2.62□□□□□ -1.99
CCDC7-215ENST00000639629 SAMD1Q6SPF0 538 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-215ENST00000639629 CLCN6P51797 869 aa2.61□□□□□ -1.99
CCDC7-215ENST00000639629 ZNF219Q9P2Y4 722 aaPredicted RBP2.61□□□□□ -1.99
CCDC7-215ENST00000639629 ATF5Q9Y2D1 282 aaPredicted RBP2.6□□□□□ -1.99
CCDC7-215ENST00000639629 RBAK-RBAKDNI3L0D1 243 aa2.59□□□□□ -1.99
CCDC7-215ENST00000639629 ZBTB22O15209 634 aa2.59□□□□□ -1.99
CCDC7-215ENST00000639629 SSUH2Q9Y2M2 353 aa2.59□□□□□ -1.99
CCDC7-215ENST00000639629 AKT1S1Q96B36 256 aa2.59□□□□□ -2
CCDC7-215ENST00000639629 KRTAP17-1Q9BYP8 105 aa2.57□□□□□ -2
CCDC7-215ENST00000639629 XP32Q5T750 250 aa2.56□□□□□ -2
CCDC7-215ENST00000639629 SP7Q8TDD2 431 aaPredicted RBP2.56□□□□□ -2
CCDC7-215ENST00000639629 FOXD4L1Q9NU39 408 aa2.54□□□□□ -2
CCDC7-215ENST00000639629 GRWD1Q9BQ67 446 aaKnown RBP eCLIP2.54□□□□□ -2
CCDC7-215ENST00000639629 PLSCR2Q9NRY7 297 aa2.54□□□□□ -2
CCDC7-215ENST00000639629 C19orf67A6NJJ6 358 aa2.53□□□□□ -2
CCDC7-215ENST00000639629 MKRN4PQ13434 485 aaPredicted RBP2.53□□□□□ -2
CCDC7-215ENST00000639629 ZBTB12Q9Y330 459 aaPredicted RBP2.53□□□□□ -2
CCDC7-215ENST00000639629 RBM42Q9BTD8 480 aaKnown RBP2.52□□□□□ -2.01
CCDC7-215ENST00000639629 EVX2Q03828 476 aa2.5□□□□□ -2.01
CCDC7-215ENST00000639629 MNX1P50219 401 aaPredicted RBP2.48□□□□□ -2.01
CCDC7-215ENST00000639629 REM2Q8IYK8 340 aaPredicted RBP2.48□□□□□ -2.01
CCDC7-215ENST00000639629 PIP4P2Q8N4L2 257 aa2.48□□□□□ -2.01
CCDC7-215ENST00000639629 SPDYE2BA6NHP3 402 aa2.46□□□□□ -2.02
CCDC7-215ENST00000639629 SPDYE6P0CI01 402 aa2.46□□□□□ -2.02
CCDC7-215ENST00000639629 SPDYE2Q495Y8 402 aa2.46□□□□□ -2.02
CCDC7-215ENST00000639629 ILDR1Q86SU0 546 aaPredicted RBP2.46□□□□□ -2.02
CCDC7-215ENST00000639629 POTEIP0CG38 1075 aa2.45□□□□□ -2.02
CCDC7-215ENST00000639629 CHRDL2Q6WN34 429 aa2.45□□□□□ -2.02
CCDC7-215ENST00000639629 PITPNM1O00562 1244 aa2.42□□□□□ -2.02
CCDC7-215ENST00000639629 POLA2Q14181 598 aa2.42□□□□□ -2.02
CCDC7-215ENST00000639629 LCE2DQ5TA82 110 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-215ENST00000639629 ZNF579Q8NAF0 562 aaKnown RBP2.4□□□□□ -2.03
CCDC7-215ENST00000639629 SLC4A1APQ9BWU0 796 aaKnown RBP2.4□□□□□ -2.03
CCDC7-215ENST00000639629 CAPN15O75808 1086 aa2.39□□□□□ -2.03
CCDC7-215ENST00000639629 CREBZFQ9NS37 354 aa2.39□□□□□ -2.03
CCDC7-215ENST00000639629 CSRNP3Q8WYN3 585 aa2.37□□□□□ -2.03
CCDC7-215ENST00000639629 DCAF8L1A6NGE4 600 aa2.37□□□□□ -2.03
CCDC7-215ENST00000639629 POTEJP0CG39 1038 aa2.37□□□□□ -2.03
CCDC7-215ENST00000639629 LOC100996750A0A140TA64 210 aa2.36□□□□□ -2.03
CCDC7-215ENST00000639629 KRTAP4-6Q9BYQ5 205 aa2.36□□□□□ -2.03
CCDC7-215ENST00000639629 SGIP1Q9BQI5 828 aa2.36□□□□□ -2.03
CCDC7-215ENST00000639629 ASTLQ6HA08 431 aaPredicted RBP2.35□□□□□ -2.03
CCDC7-215ENST00000639629 POTEB2H3BUK9 544 aa2.34□□□□□ -2.03
CCDC7-215ENST00000639629 LHX8Q68G74 356 aa2.34□□□□□ -2.04
CCDC7-215ENST00000639629 CHRM1P11229 460 aaPredicted RBP2.33□□□□□ -2.04
CCDC7-215ENST00000639629 POTEFA5A3E0 1075 aa2.32□□□□□ -2.04
CCDC7-215ENST00000639629 ABCB7O75027 752 aa2.32□□□□□ -2.04
CCDC7-215ENST00000639629 SPDYE1Q8NFV5 336 aaPredicted RBP2.32□□□□□ -2.04
CCDC7-215ENST00000639629 GABBR2O75899 941 aa2.31□□□□□ -2.04
CCDC7-215ENST00000639629 OSCARQ8IYS5 282 aa2.31□□□□□ -2.04
CCDC7-215ENST00000639629 DNAJC5Q9H3Z4 198 aa2.29□□□□□ -2.04
CCDC7-215ENST00000639629 TRHP20396 242 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-215ENST00000639629 OTUD5Q96G74 571 aa2.28□□□□□ -2.04
CCDC7-215ENST00000639629 FARP1Q9Y4F1 1045 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-215ENST00000639629 CCDC61Q9Y6R9 512 aa2.28□□□□□ -2.05
CCDC7-215ENST00000639629 STAG3Q9UJ98 1225 aa2.27□□□□□ -2.05
CCDC7-215ENST00000639629 FBLN2P98095 1184 aa2.27□□□□□ -2.05
CCDC7-215ENST00000639629 PELP1Q8IZL8 1130 aaKnown RBP2.26□□□□□ -2.05
CCDC7-215ENST00000639629 NUBP1P53384 320 aa2.26□□□□□ -2.05
CCDC7-215ENST00000639629 IER5LQ5T953 404 aa2.26□□□□□ -2.05
CCDC7-215ENST00000639629 TMEM121BQ9BXQ6 578 aaPredicted RBP2.25□□□□□ -2.05
CCDC7-215ENST00000639629 ATMINO43313 823 aaPredicted RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms