RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 YIPF3Q9GZM5 350 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 PAPOLBQ9NRJ5 636 aaKnown RBP8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 FAM184BQ9ULE4 1060 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 RIPOR2Q9Y4F9 1068 aa8.37□□□□□ -1.07
TRIM49B-202ENST00000622138 SHANK3Q9BYB0 1731 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 A6NHS1 94 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 ECEL1O95672 775 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 FGAP02671 866 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 GHRP10912 638 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 IBSPP21815 317 aaPredicted RBP8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 LSP1P33241 339 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 RANBP1P43487 201 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 AMPD2Q01433 879 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 AKAP17AQ02040 695 aaKnown RBP8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 APBA1Q02410 837 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 CKAP4Q07065 602 aaKnown RBP8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 PDCLQ13371 301 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 STK38Q15208 465 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 LRRC23Q53EV4 343 aaPredicted RBP8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 ANKRD20A8PQ5CZ79 823 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 ZNF569Q5MCW4 686 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 ADALQ6DHV7 355 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 RINLQ6ZS11 566 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 TBC1D5Q92609 795 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 DPF2Q92785 391 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 CNKSR1Q969H4 720 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 C8orf76Q96K31 380 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 SLX1AQ9BQ83 275 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 GORASP1Q9BQQ3 440 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 MOV10L1Q9BXT6 1211 aaKnown RBP8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 NOD2Q9HC29 1040 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 SENP2Q9HC62 589 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 ADGRG1Q9Y653 693 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 MYH7P12883 1935 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 TNS2Q63HR2 1409 aa8.36□□□□□ -1.07
TRIM49B-202ENST00000622138 RNF8O76064 485 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 FAM107AO95990 144 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 SLC3A2P08195 630 aaKnown RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 ATP1A3P13637 1013 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 KIF23Q02241 960 aaPredicted RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 CUL3Q13618 768 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 PTGISQ16647 500 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 TTC39AQ5SRH9 613 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 ALS2CLQ60I27 953 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 SPECC1LQ69YQ0 1117 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 MYLK4Q86YV6 388 aaPredicted RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 SYNE4Q8N205 404 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 FBXL16Q8N461 479 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 MYCBPAPQ8TBZ2 947 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 AENQ8WTP8 325 aaKnown RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 BICD1Q96G01 975 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 RUFY1Q96T51 708 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 HAUS2Q9NVX0 235 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 NOP53Q9NZM5 478 aaKnown RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 MYO5AQ9Y4I1 1855 aaKnown RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 TOGARAM1Q9Y4F4 1720 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 SPTLC2O15270 562 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 PPP1R37O75864 691 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 LINGO3P0C6S8 592 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 PFKFB1P16118 471 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 RXRAP19793 462 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 MYO1EQ12965 1108 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 ACCSLQ4AC99 568 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 RRP12Q5JTH9 1297 aaKnown RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 SPECC1Q5M775 1068 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 DNAJC14Q6Y2X3 702 aaPredicted RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 RASGRP2Q7LDG7 609 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 ARMC9Q7Z3E5 817 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 NLRP14Q86W24 1093 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 TEX9Q8N6V9 391 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 RBM41Q96IZ5 413 aaKnown RBP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 DESI2Q9BSY9 194 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 ISCA1Q9BUE6 129 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 NUP58Q9BVL2 599 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 RABEP2Q9H5N1 569 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 CEP126Q9P2H0 1117 aa8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRIM49B-202ENST00000622138 CPDO75976 1380 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 AKAP11Q9UKA4 1901 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 UBN2Q6ZU65 1347 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 TMEM232C9JQI7 657 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 UBE2Q2LH0YL09 131 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 GPAA1O43292 621 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 FMNL1O95466 1100 aaPredicted RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 YEATS4O95619 227 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 GNAT1P11488 350 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 TPP2P29144 1249 aaPredicted RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 MARCKSP29966 332 aaPredicted RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 GOLGA8FQ08AF8 430 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 GOLGA8DPQ0D2H9 430 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 IFT88Q13099 833 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 DYNC1I2Q13409 638 aaKnown RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 IMMTQ16891 758 aaKnown RBP8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 ARMC3Q5W041 872 aa8.34□□□□□ -1.07
TRIM49B-202ENST00000622138 MSL1Q68DK7 614 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms