RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CUL5Q93034 780 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 NUP58Q9BVL2 599 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 INTS13Q9NVM9 706 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 HAUS2Q9NVX0 235 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 ATP6V1G2O95670 118 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 RANBP1P43487 201 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
VPS11-207ENST00000620429 BLMHQ13867 455 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 LACTB2Q53H82 288 aaPredicted RBP11.58□□□□□ -0.56
VPS11-207ENST00000620429 OTUD7BQ6GQQ9 843 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 CCNI2Q6ZMN8 369 aaPredicted RBP11.58□□□□□ -0.56
VPS11-207ENST00000620429 SLC35F6Q8N357 371 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 LINC00301Q8NCQ3 95 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 RPGRIP1Q96KN7 1286 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 DBNDD2Q9BQY9 259 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 NAA15Q9BXJ9 866 aaKnown RBP11.58□□□□□ -0.56
VPS11-207ENST00000620429 NOD2Q9HC29 1040 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.58□□□□□ -0.56
VPS11-207ENST00000620429 CLIC4Q9Y696 253 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 PCDH11XQ9BZA7 1347 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 PCDH11YQ9BZA8 1340 aa11.58□□□□□ -0.56
VPS11-207ENST00000620429 CARMIL3Q8ND23 1372 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 A0A087WZG4 1122 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 BUB1BO60566 1050 aaPredicted RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 RNF8O76064 485 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 POLR3DP05423 398 aaPredicted RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 SSBP05455 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
VPS11-207ENST00000620429 IL2RBP14784 551 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 EVA1CP58658 441 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 SPECC1LQ69YQ0 1117 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 KDM7AQ6ZMT4 941 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 GALNT15Q8N3T1 639 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 PANX2Q96RD6 677 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 CDCA7Q9BWT1 371 aaPredicted RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 CASZ1Q86V15 1759 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 SALL1Q9NSC2 1324 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 DNAJC8O75937 253 aaPredicted RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 FAM107AO95990 144 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 TFRCP02786 760 aaKnown RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 PDIA3P30101 505 aaKnown RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 EXOSC10Q01780 885 aaKnown RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 MYO1EQ12965 1108 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 ANKRD20A8PQ5CZ79 823 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 RASGRP2Q7LDG7 609 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 MYCBPAPQ8TBZ2 947 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 AENQ8WTP8 325 aaKnown RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
VPS11-207ENST00000620429 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 FAM184BQ9ULE4 1060 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 LAMA4Q16363 1823 aa11.57□□□□□ -0.56
VPS11-207ENST00000620429 B4DLN1 442 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 SPTLC2O15270 562 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 ALDH1B1P30837 517 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 RIPK1Q13546 671 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 PTGISQ16647 500 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 NLRP14Q86W24 1093 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 MYLK4Q86YV6 388 aaPredicted RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 APLFQ8IW19 511 aaPredicted RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 PDILTQ8N807 584 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 KCNG4Q8TDN1 519 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 P3H4Q92791 437 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 CCDC97Q96F63 343 aaPredicted RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 RBM41Q96IZ5 413 aaKnown RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 CCT8L2Q96SF2 557 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 TSC22D3Q99576 134 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 HAUS7Q99871 368 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 GORASP1Q9BQQ3 440 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 MAF1Q9H063 256 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 A0A0G2JLW4 131 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 E7EWF7 191 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 DNM1LO00429 736 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 FMNL1O95466 1100 aaPredicted RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 RFX5P48382 616 aaPredicted RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 ADKP55263 362 aaKnown RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 PTPN12Q05209 780 aaKnown RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 MTF1Q14872 753 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 STAMBPL1Q96FJ0 436 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 COPRSQ9NQ92 184 aa11.56□□□□□ -0.56
VPS11-207ENST00000620429 TTF2Q9UNY4 1162 aaKnown RBP11.56□□□□□ -0.56
VPS11-207ENST00000620429 PPP1R37O75864 691 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 FDPSP14324 419 aaKnown RBP11.55□□□□□ -0.56
VPS11-207ENST00000620429 TPP2P29144 1249 aaPredicted RBP11.55□□□□□ -0.56
VPS11-207ENST00000620429 CCDC38Q502W7 563 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 TTMPQ5BVD1 217 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 ALS2CLQ60I27 953 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 PLBD2Q8NHP8 589 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 DTNBP1Q96EV8 351 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 ZNF274Q96GC6 653 aaPredicted RBP11.55□□□□□ -0.56
VPS11-207ENST00000620429 AGXT2Q9BYV1 514 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 OSBPL7Q9BZF2 842 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 ZNF330Q9Y3S2 320 aaPredicted RBP11.55□□□□□ -0.56
VPS11-207ENST00000620429 RFX7Q2KHR2 1363 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 YEATS4O95619 227 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 GNAT1P11488 350 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 ELF3P78545 371 aaPredicted RBP11.55□□□□□ -0.56
VPS11-207ENST00000620429 USP4Q13107 963 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 CCDC178Q5BJE1 867 aa11.55□□□□□ -0.56
VPS11-207ENST00000620429 SPECC1Q5M775 1068 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms