RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 SNAI1O95863 264 aaPredicted RBP17.19■□□□□ 0.34
LINC01278-203ENST00000608788 AKR1B1P15121 316 aa17.19■□□□□ 0.34
LINC01278-203ENST00000608788 ICA1Q05084 483 aa17.19■□□□□ 0.34
LINC01278-203ENST00000608788 PPIGQ13427 754 aaKnown RBP eCLIP17.19■□□□□ 0.34
LINC01278-203ENST00000608788 KCNA10Q16322 511 aa17.19■□□□□ 0.34
LINC01278-203ENST00000608788 TMEM57Q8N5G2 664 aa17.19■□□□□ 0.34
LINC01278-203ENST00000608788 MSL3Q8N5Y2 521 aaKnown RBP17.19■□□□□ 0.34
LINC01278-203ENST00000608788 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
LINC01278-203ENST00000608788 UHRF1Q96T88 793 aaPredicted RBP17.19■□□□□ 0.34
LINC01278-203ENST00000608788 CRNKL1Q9BZJ0 848 aaKnown RBP17.19■□□□□ 0.34
LINC01278-203ENST00000608788 SWAP70Q9UH65 585 aa17.19■□□□□ 0.34
LINC01278-203ENST00000608788 TCRBV5S4A2TA0A5A2 114 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 CSF2RAP15509 400 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 PDE6AP16499 860 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 STAT3P40763 770 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 KCTD2Q14681 263 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 MAMDC4Q6UXC1 1216 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 SDR42E1Q8WUS8 393 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 PPM1EQ8WY54 764 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 DYNLL2Q96FJ2 89 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 SH2D4AQ9H788 454 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 ARHGEF10LQ9HCE6 1279 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 CNPY2Q9Y2B0 182 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 SYNGAP1Q96PV0 1343 aa17.18■□□□□ 0.34
LINC01278-203ENST00000608788 MYH8P13535 1937 aa17.17■□□□□ 0.34
LINC01278-203ENST00000608788 DNAJC25-GNG10A0A024R161 153 aa17.17■□□□□ 0.34
LINC01278-203ENST00000608788 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
LINC01278-203ENST00000608788 ADCY6O43306 1168 aa17.17■□□□□ 0.34
LINC01278-203ENST00000608788 DUSP11O75319 330 aaKnown RBP17.17■□□□□ 0.34
LINC01278-203ENST00000608788 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
LINC01278-203ENST00000608788 ZNF365Q70YC5 407 aa17.17■□□□□ 0.34
LINC01278-203ENST00000608788 ZBTB47Q9UFB7 747 aaPredicted RBP17.17■□□□□ 0.34
LINC01278-203ENST00000608788 FAM184BQ9ULE4 1060 aa17.17■□□□□ 0.34
LINC01278-203ENST00000608788 MROH7Q68CQ1 1323 aa17.17■□□□□ 0.34
LINC01278-203ENST00000608788 SMIM22K7EJ46 135 aa17.16■□□□□ 0.34
LINC01278-203ENST00000608788 COPB2P35606 906 aa17.16■□□□□ 0.34
LINC01278-203ENST00000608788 SLC9C2Q5TAH2 1124 aa17.16■□□□□ 0.34
LINC01278-203ENST00000608788 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
LINC01278-203ENST00000608788 CCDC174Q6PII3 467 aa17.16■□□□□ 0.34
LINC01278-203ENST00000608788 FAM126BQ8IXS8 530 aa17.16■□□□□ 0.34
LINC01278-203ENST00000608788 LCORLQ8N3X6 602 aa17.16■□□□□ 0.34
LINC01278-203ENST00000608788 HERVK_113Q902F9 699 aa17.16■□□□□ 0.34
LINC01278-203ENST00000608788 UPF3AQ9H1J1 476 aaKnown RBP17.16■□□□□ 0.34
LINC01278-203ENST00000608788 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
LINC01278-203ENST00000608788 CTAGE5O15320 804 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 BMP1P13497 986 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 NKX3-2P78367 333 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 TMEM199Q8N511 208 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
LINC01278-203ENST00000608788 FAM122AQ96E09 287 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 CCDC17Q96LX7 622 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 GLT1D1Q96MS3 346 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 PHF12Q96QT6 1004 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 CXXC1Q9P0U4 656 aaPredicted RBP17.15■□□□□ 0.34
LINC01278-203ENST00000608788 GBF1Q92538 1859 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
LINC01278-203ENST00000608788 ARVCFO00192 962 aa17.14■□□□□ 0.33
LINC01278-203ENST00000608788 CD4P01730 458 aa17.14■□□□□ 0.33
LINC01278-203ENST00000608788 ASGR1P07306 291 aa17.14■□□□□ 0.33
LINC01278-203ENST00000608788 ACRP10323 421 aa17.14■□□□□ 0.33
LINC01278-203ENST00000608788 EEF2P13639 858 aaKnown RBP17.14■□□□□ 0.33
LINC01278-203ENST00000608788 TTF1Q15361 905 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-203ENST00000608788 RAB30Q15771 203 aa17.14■□□□□ 0.33
LINC01278-203ENST00000608788 CCDC85BQ15834 202 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-203ENST00000608788 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.14■□□□□ 0.33
LINC01278-203ENST00000608788 ZNF467Q7Z7K2 595 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-203ENST00000608788 FGD4Q96M96 766 aa17.14■□□□□ 0.33
LINC01278-203ENST00000608788 TSPYL2Q9H2G4 693 aaPredicted RBP17.14■□□□□ 0.33
LINC01278-203ENST00000608788 YBX2Q9Y2T7 364 aaKnown RBP17.14■□□□□ 0.33
LINC01278-203ENST00000608788 BAZ2AQ9UIF9 1905 aaKnown RBP17.13■□□□□ 0.33
LINC01278-203ENST00000608788 CDK8P49336 464 aa17.13■□□□□ 0.33
LINC01278-203ENST00000608788 GJA9P57773 515 aa17.13■□□□□ 0.33
LINC01278-203ENST00000608788 AACSQ86V21 672 aa17.13■□□□□ 0.33
LINC01278-203ENST00000608788 PCSK9Q8NBP7 692 aaKnown RBP17.13■□□□□ 0.33
LINC01278-203ENST00000608788 NECAB3Q96P71 396 aaPredicted RBP17.13■□□□□ 0.33
LINC01278-203ENST00000608788 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC01278-203ENST00000608788 IL23AQ9NPF7 189 aa17.13■□□□□ 0.33
LINC01278-203ENST00000608788 RIPK3Q9Y572 518 aa17.13■□□□□ 0.33
LINC01278-203ENST00000608788 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
LINC01278-203ENST00000608788 PRRC2BQ5JSZ5 2229 aaKnown RBP17.13■□□□□ 0.33
LINC01278-203ENST00000608788 MCM3APO60318 1980 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 A0A0U1RQG5 324 aaPredicted RBP17.12■□□□□ 0.33
LINC01278-203ENST00000608788 PRKAB2O43741 272 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 ACVR2BQ13705 512 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 FAM83BQ5T0W9 1011 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 C12orf60Q5U649 245 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 SLC43A3Q8NBI5 491 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 TEX13BQ9BXU2 312 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 PPP1R12CQ9BZL4 782 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 KATNBL1Q9H079 304 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 NKX2-4Q9H2Z4 354 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 KANSL2Q9H9L4 492 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 ATP8A2Q9NTI2 1148 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 MSRAQ9UJ68 235 aa17.12■□□□□ 0.33
LINC01278-203ENST00000608788 ZHX1Q9UKY1 873 aaPredicted RBP17.12■□□□□ 0.33
LINC01278-203ENST00000608788 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
LINC01278-203ENST00000608788 MUC6Q6W4X9 2439 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms