RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 SMARCA1P28370 1054 aa21.37■■□□□ 1.01
HDAC5-212ENST00000593013 TBC1D10BQ4KMP7 808 aaPredicted RBP21.37■■□□□ 1.01
HDAC5-212ENST00000593013 TTC38Q5R3I4 469 aa21.37■■□□□ 1.01
HDAC5-212ENST00000593013 ZNF830Q96NB3 372 aaPredicted RBP21.37■■□□□ 1.01
HDAC5-212ENST00000593013 SPZ1Q9BXG8 430 aa21.37■■□□□ 1.01
HDAC5-212ENST00000593013 TOP1P11387 765 aaKnown RBP21.36■■□□□ 1.01
HDAC5-212ENST00000593013 ATP2C1P98194 919 aaPredicted RBP21.36■■□□□ 1.01
HDAC5-212ENST00000593013 NFIAQ12857 509 aa21.36■■□□□ 1.01
HDAC5-212ENST00000593013 PNOCQ13519 176 aa21.36■■□□□ 1.01
HDAC5-212ENST00000593013 SPDYE2Q495Y8 402 aa21.36■■□□□ 1.01
HDAC5-212ENST00000593013 NT5DC1Q5TFE4 455 aa21.36■■□□□ 1.01
HDAC5-212ENST00000593013 GALNT17Q6IS24 598 aa21.36■■□□□ 1.01
HDAC5-212ENST00000593013 IDI2Q9BXS1 227 aa21.36■■□□□ 1.01
HDAC5-212ENST00000593013 CSRNP2Q9H175 543 aa21.36■■□□□ 1.01
HDAC5-212ENST00000593013 DDX4Q9NQI0 724 aaKnown RBP21.36■■□□□ 1.01
HDAC5-212ENST00000593013 VEGFAP15692 232 aaPredicted RBP21.35■■□□□ 1.01
HDAC5-212ENST00000593013 KIF4BQ2VIQ3 1234 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 RBM26Q5T8P6 1007 aaKnown RBP21.35■■□□□ 1.01
HDAC5-212ENST00000593013 KANK3Q6NY19 840 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 TRPM4Q8TD43 1214 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 SPTLC3Q9NUV7 552 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 ZNF70Q9UC06 446 aaPredicted RBP21.35■■□□□ 1.01
HDAC5-212ENST00000593013 PCDHA4Q9UN74 947 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 STX8Q9UNK0 236 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 WDR90Q96KV7 1748 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 SMTNL1A8MU46 457 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 M0R2N6 131 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 WNT7AO00755 349 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 ACTN4O43707 911 aaKnown RBP21.35■■□□□ 1.01
HDAC5-212ENST00000593013 CYTH3O43739 400 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 NPM3O75607 178 aaKnown RBP21.35■■□□□ 1.01
HDAC5-212ENST00000593013 ATP2B1P20020 1258 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 LMOD1P29536 600 aaPredicted RBP21.35■■□□□ 1.01
HDAC5-212ENST00000593013 CACNB3P54284 484 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 NCAPHQ15003 741 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 NOM1Q5C9Z4 860 aaKnown RBP21.35■■□□□ 1.01
HDAC5-212ENST00000593013 BLIDQ8IZY5 108 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 CCDC148Q8NFR7 591 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 FAM198AQ9UFP1 575 aa21.35■■□□□ 1.01
HDAC5-212ENST00000593013 SCN4AP35499 1836 aa21.34■■□□□ 1.01
HDAC5-212ENST00000593013 BIN1O00499 593 aa21.34■■□□□ 1.01
HDAC5-212ENST00000593013 HIRAP54198 1017 aaPredicted RBP21.34■■□□□ 1.01
HDAC5-212ENST00000593013 SPECC1Q5M775 1068 aa21.34■■□□□ 1.01
HDAC5-212ENST00000593013 FOXP4Q8IVH2 680 aaPredicted RBP21.34■■□□□ 1.01
HDAC5-212ENST00000593013 ADARB2Q9NS39 739 aaKnown RBP21.34■■□□□ 1.01
HDAC5-212ENST00000593013 CLIP2Q9UDT6 1046 aa21.34■■□□□ 1.01
HDAC5-212ENST00000593013 IGKV6D-41A0A0C4DH26 115 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 CLRN2A0PK11 232 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 POTECB2RU33 542 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 POLR2DO15514 142 aaKnown RBP21.33■■□□□ 1.01
HDAC5-212ENST00000593013 PTGS1P23219 599 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 POSTNQ15063 836 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 FKBP1CQ5VVH2 108 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 KIAA1524Q8TCG1 905 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 CEP95Q96GE4 821 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 BARHL2Q9NY43 387 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 SWAP70Q9UH65 585 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 PCDHA5Q9Y5H7 936 aa21.33■■□□□ 1.01
HDAC5-212ENST00000593013 STXBP3O00186 592 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 MYO1BO43795 1136 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 YY1P25490 414 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 SARSP49591 514 aaKnown RBP21.32■■□□□ 1
HDAC5-212ENST00000593013 TPM4P67936 248 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 WWC2Q6AWC2 1192 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 PIK3AP1Q6ZUJ8 805 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 CCDC186Q7Z3E2 898 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 SERTAD1Q9UHV2 236 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 SIPA1L1O43166 1804 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 PARP1P09874 1014 aaKnown RBP21.32■■□□□ 1
HDAC5-212ENST00000593013 TERF1P54274 439 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 PICALMQ13492 652 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 TYW1BQ6NUM6 668 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 DRC7Q8IY82 874 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 TRIML1Q8N9V2 468 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 SPATA20Q8TB22 786 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 ZNF526Q8TF50 670 aaPredicted RBP21.32■■□□□ 1
HDAC5-212ENST00000593013 GPKOWQ92917 476 aaPredicted RBP eCLIP21.32■■□□□ 1
HDAC5-212ENST00000593013 HACL1Q9UJ83 578 aa21.32■■□□□ 1
HDAC5-212ENST00000593013 ASTN2O75129 1339 aaPredicted RBP21.32■■□□□ 1
HDAC5-212ENST00000593013 KLRF2D3W0D1 207 aa21.31■■□□□ 1
HDAC5-212ENST00000593013 ADAMTS3O15072 1205 aa21.31■■□□□ 1
HDAC5-212ENST00000593013 NOLC1Q14978 699 aaKnown RBP eCLIP21.31■■□□□ 1
HDAC5-212ENST00000593013 ZNF174Q15697 407 aa21.31■■□□□ 1
HDAC5-212ENST00000593013 USP49Q70CQ1 688 aa21.31■■□□□ 1
HDAC5-212ENST00000593013 ZFPM1Q8IX07 1006 aa21.31■■□□□ 1
HDAC5-212ENST00000593013 OSBPL5Q9H0X9 879 aaPredicted RBP21.31■■□□□ 1
HDAC5-212ENST00000593013 PTGDRQ13258 359 aa21.3■■□□□ 1
HDAC5-212ENST00000593013 ARL6IP4Q66PJ3 421 aaKnown RBP21.3■■□□□ 1
HDAC5-212ENST00000593013 SH3RF1Q7Z6J0 888 aa21.3■■□□□ 1
HDAC5-212ENST00000593013 CCDC34Q96HJ3 373 aa21.3■■□□□ 1
HDAC5-212ENST00000593013 TMOD2Q9NZR1 351 aa21.3■■□□□ 1
HDAC5-212ENST00000593013 CNTNAP1P78357 1384 aa21.29■■□□□ 1
HDAC5-212ENST00000593013 FOXN1O15353 648 aa21.29■■□□□ 1
HDAC5-212ENST00000593013 ENTPD3O75355 529 aa21.29■■□□□ 1
HDAC5-212ENST00000593013 SYMPKQ92797 1274 aaKnown RBP21.29■■□□□ 1
HDAC5-212ENST00000593013 EHD4Q9H223 541 aa21.29■■□□□ 1
HDAC5-212ENST00000593013 HSD3B7Q9H2F3 369 aa21.29■■□□□ 1
HDAC5-212ENST00000593013 MTMR4Q9NYA4 1195 aa21.29■■□□□ 1
HDAC5-212ENST00000593013 NRBP1Q9UHY1 535 aa21.29■■□□□ 1
HDAC5-212ENST00000593013 MAN1B1Q9UKM7 699 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms