RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 KCNA5P22460 613 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 GUCY1A2P33402 732 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 USP14P54578 494 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 PTPN5P54829 565 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 ZP2Q05996 745 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 PTCRAQ6ISU1 281 aaPredicted RBP7.53□□□□□ -1.2
VPS25-204ENST00000589577 TATDN1Q6P1N9 297 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 ADGRA1Q86SQ6 560 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 NCAPG2Q86XI2 1143 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 MIER1Q8N108 512 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 CRACR2BQ8N4Y2 399 aaPredicted RBP7.53□□□□□ -1.2
VPS25-204ENST00000589577 SLC43A3Q8NBI5 491 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 SCLYQ96I15 445 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 AGBL1Q96MI9 1066 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 UPF3AQ9H1J1 476 aaKnown RBP7.53□□□□□ -1.2
VPS25-204ENST00000589577 FAM86C1Q9NVL1 165 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 HMG20BQ9P0W2 317 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 NCOR2Q9Y618 2525 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 NAV1Q8NEY1 1877 aa7.53□□□□□ -1.2
VPS25-204ENST00000589577 GRIN2DO15399 1336 aa7.52□□□□□ -1.2
VPS25-204ENST00000589577 IL16Q14005 1332 aa7.52□□□□□ -1.2
VPS25-204ENST00000589577 A0A1W2PRG0 241 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 LCHNA4D1U4 455 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 C19orf67A6NJJ6 358 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 TLR3O15455 904 aaKnown RBP7.52□□□□□ -1.21
VPS25-204ENST00000589577 DUSP11O75319 330 aaKnown RBP7.52□□□□□ -1.21
VPS25-204ENST00000589577 RGS20O76081 388 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 SNAI1O95863 264 aaPredicted RBP7.52□□□□□ -1.21
VPS25-204ENST00000589577 C6orf222P0C671 652 aaPredicted RBP7.52□□□□□ -1.21
VPS25-204ENST00000589577 FCER1AP12319 257 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 EXOSC9Q06265 439 aaKnown RBP7.52□□□□□ -1.21
VPS25-204ENST00000589577 COG2Q14746 738 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 CCDC27Q2M243 656 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 ERMP1Q7Z2K6 904 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 TGFBRAP1Q8WUH2 860 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 ATG4CQ96DT6 458 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 MFSD14AQ96MC6 490 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 USP44Q9H0E7 712 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 AATFQ9NY61 560 aaKnown RBP eCLIP7.52□□□□□ -1.21
VPS25-204ENST00000589577 CEP126Q9P2H0 1117 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 SAP30BPQ9UHR5 308 aaKnown RBP7.52□□□□□ -1.21
VPS25-204ENST00000589577 DIS3Q9Y2L1 958 aaKnown RBP7.52□□□□□ -1.21
VPS25-204ENST00000589577 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.52□□□□□ -1.21
VPS25-204ENST00000589577 MYH8P13535 1937 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 ZNF536O15090 1300 aa7.52□□□□□ -1.21
VPS25-204ENST00000589577 B4GALT4O60513 344 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 LDHCP07864 332 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 IRS1P35568 1242 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 GJA9P57773 515 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 TIMM10P62072 90 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 GSTO1P78417 241 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 PLS1Q14651 629 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 TMEM132BQ14DG7 1078 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 RAB3GAP1Q15042 981 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 HERC6Q8IVU3 1022 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 MB21D1Q8N884 522 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 PCSK9Q8NBP7 692 aaKnown RBP7.51□□□□□ -1.21
VPS25-204ENST00000589577 NEK9Q8TD19 979 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 TANGO6Q9C0B7 1094 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 TRPV6Q9H1D0 765 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 HOXC10Q9NYD6 342 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 LMCD1Q9NZU5 365 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 FAM184BQ9ULE4 1060 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 CNPY2Q9Y2B0 182 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 ASTN1O14525 1302 aa7.51□□□□□ -1.21
VPS25-204ENST00000589577 H3BQ06 376 aaPredicted RBP7.5□□□□□ -1.21
VPS25-204ENST00000589577 DSG3P32926 999 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 PPP4CP60510 307 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 NKX3-2P78367 333 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 GNASQ5JWF2 1037 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 CXCL17Q6UXB2 119 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 RPUSD2Q8IZ73 545 aaKnown RBP7.5□□□□□ -1.21
VPS25-204ENST00000589577 FAM9BQ8IZU0 186 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 SPATA5Q8NB90 893 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 VTI1AQ96AJ9 217 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 XAGE2Q96GT9 111 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 FGD4Q96M96 766 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 SLC9A7Q96T83 725 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 MMP19Q99542 508 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 SUGCTQ9HAC7 445 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 RAI14Q9P0K7 980 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 MUTYHQ9UIF7 546 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 FBXO3Q9UK99 471 aa7.5□□□□□ -1.21
VPS25-204ENST00000589577 ZHX1Q9UKY1 873 aaPredicted RBP7.5□□□□□ -1.21
VPS25-204ENST00000589577 PA2G4Q9UQ80 394 aaKnown RBP7.5□□□□□ -1.21
VPS25-204ENST00000589577 TPRP12270 2363 aaKnown RBP7.5□□□□□ -1.21
VPS25-204ENST00000589577 TRIP12Q14669 1992 aaPredicted RBP7.5□□□□□ -1.21
VPS25-204ENST00000589577 DNAJC25-GNG10A0A024R161 153 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 A0A1B0GUL7 405 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 RBAK-RBAKDNI3L0D1 243 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 PFKMP08237 780 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 PTGS1P23219 599 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 SHMT1P34896 483 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 BEX3Q00994 111 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 ITGA7Q13683 1181 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 SEPT2Q15019 361 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 ABCB5Q2M3G0 1257 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 CCDC144BQ3MJ40 725 aa7.49□□□□□ -1.21
VPS25-204ENST00000589577 HERC4Q5GLZ8 1057 aaPredicted RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms