RNA–Protein interactions for RNA: ENST00000550974.1

GPN3-208, Transcript of GPN-loop GTPase 3, humanhuman

TSL 5

Gene GPN3, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-208ENST00000550974 CCER1Q8TC90 406 aaPredicted RBP13.94□□□□□ -0.18
GPN3-208ENST00000550974 EDAQ92838 391 aa13.94□□□□□ -0.18
GPN3-208ENST00000550974 AGBL1Q96MI9 1066 aa13.94□□□□□ -0.18
GPN3-208ENST00000550974 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
GPN3-208ENST00000550974 SIL1Q9H173 461 aa13.94□□□□□ -0.18
GPN3-208ENST00000550974 IRF2BPLQ9H1B7 796 aa13.94□□□□□ -0.18
GPN3-208ENST00000550974 RAI14Q9P0K7 980 aa13.94□□□□□ -0.18
GPN3-208ENST00000550974 TRPC6Q9Y210 931 aa13.94□□□□□ -0.18
GPN3-208ENST00000550974 FAM50BQ9Y247 325 aa13.94□□□□□ -0.18
GPN3-208ENST00000550974 LCHNA4D1U4 455 aa13.93□□□□□ -0.18
GPN3-208ENST00000550974 TMEM221A6NGB7 291 aa13.93□□□□□ -0.18
GPN3-208ENST00000550974 M0R296 226 aa13.93□□□□□ -0.18
GPN3-208ENST00000550974 B4GALT4O60513 344 aa13.93□□□□□ -0.18
GPN3-208ENST00000550974 TBC1D9Q6ZT07 1266 aa13.93□□□□□ -0.18
GPN3-208ENST00000550974 MB21D1Q8N884 522 aa13.93□□□□□ -0.18
GPN3-208ENST00000550974 FLT1P17948 1338 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 PDS5AQ29RF7 1337 aaKnown RBP13.92□□□□□ -0.18
GPN3-208ENST00000550974 H0Y858 1186 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 ADCY6O43306 1168 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 VAMP4O75379 141 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 SNAI1O95863 264 aaPredicted RBP13.92□□□□□ -0.18
GPN3-208ENST00000550974 HLA-DOAP06340 250 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 RFX5P48382 616 aaPredicted RBP13.92□□□□□ -0.18
GPN3-208ENST00000550974 GJA9P57773 515 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 ITGA7Q13683 1181 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 CXCL17Q6UXB2 119 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 ATF7IPQ6VMQ6 1270 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 RNF135Q8IUD6 432 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 SLC43A3Q8NBI5 491 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 ALG13Q9NP73 1137 aaKnown RBP13.92□□□□□ -0.18
GPN3-208ENST00000550974 TLR9Q9NR96 1032 aa13.92□□□□□ -0.18
GPN3-208ENST00000550974 AATFQ9NY61 560 aaKnown RBP eCLIP13.92□□□□□ -0.18
GPN3-208ENST00000550974 COL4A6Q14031 1691 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 ZBTB22O15209 634 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 SLC25A27O95847 323 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 DSG3P32926 999 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 BEX3Q00994 111 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 CCDC27Q2M243 656 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 TRIM67Q6ZTA4 783 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 FBXL6Q8N531 539 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 CNTNAP3BQ96NU0 1288 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 CNTNAP3Q9BZ76 1288 aa13.91□□□□□ -0.18
GPN3-208ENST00000550974 UPF3AQ9H1J1 476 aaKnown RBP13.91□□□□□ -0.18
GPN3-208ENST00000550974 PRR23AA6NEV1 266 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 PROB1E7EW31 1015 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 FLOT1O75955 427 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 BAG3O95817 575 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 TIMM10P62072 90 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 TMEM132BQ14DG7 1078 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 ABCB5Q2M3G0 1257 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 TATDN1Q6P1N9 297 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 ZBED2Q9BTP6 218 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 FTOQ9C0B1 505 aaKnown RBP eCLIP13.9□□□□□ -0.18
GPN3-208ENST00000550974 CABP5Q9NP86 173 aa13.9□□□□□ -0.18
GPN3-208ENST00000550974 GRIN2DO15399 1336 aa13.9□□□□□ -0.19
GPN3-208ENST00000550974 ZFHX2Q9C0A1 2572 aaPredicted RBP13.89□□□□□ -0.19
GPN3-208ENST00000550974 VCPP55072 806 aaKnown RBP13.89□□□□□ -0.19
GPN3-208ENST00000550974 ACVR2BQ13705 512 aa13.89□□□□□ -0.19
GPN3-208ENST00000550974 CCDC144BQ3MJ40 725 aa13.89□□□□□ -0.19
GPN3-208ENST00000550974 CERKLQ49MI3 558 aaPredicted RBP13.89□□□□□ -0.19
GPN3-208ENST00000550974 TMCO2Q7Z6W1 182 aaPredicted RBP13.89□□□□□ -0.19
GPN3-208ENST00000550974 MSL3Q8N5Y2 521 aaKnown RBP13.89□□□□□ -0.19
GPN3-208ENST00000550974 FSD1Q9BTV5 496 aa13.89□□□□□ -0.19
GPN3-208ENST00000550974 DCHS1Q96JQ0 3298 aa13.89□□□□□ -0.19
GPN3-208ENST00000550974 CTAGE5O15320 804 aa13.88□□□□□ -0.19
GPN3-208ENST00000550974 CYP2C9P11712 490 aa13.88□□□□□ -0.19
GPN3-208ENST00000550974 PSMC6P62333 389 aa13.88□□□□□ -0.19
GPN3-208ENST00000550974 PI16Q6UXB8 463 aa13.88□□□□□ -0.19
GPN3-208ENST00000550974 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
GPN3-208ENST00000550974 HMG20BQ9P0W2 317 aa13.88□□□□□ -0.19
GPN3-208ENST00000550974 ZFHX4Q86UP3 3567 aa13.88□□□□□ -0.19
GPN3-208ENST00000550974 BRWD1Q9NSI6 2320 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 A0A1W2PRG0 241 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 CABYRO75952 493 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 CIAO1O76071 339 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 PLCG2P16885 1265 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 ERVK-21P61565 698 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 POP1Q99575 1024 aaKnown RBP13.87□□□□□ -0.19
GPN3-208ENST00000550974 LRP2BPQ9P2M1 347 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 SPTBN4Q9H254 2564 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 PLXNA3P51805 1871 aa13.87□□□□□ -0.19
GPN3-208ENST00000550974 CACNA1BQ00975 2339 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 ZNFX1Q9P2E3 1918 aaKnown RBP13.86□□□□□ -0.19
GPN3-208ENST00000550974 AVPR2P30518 371 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 GUCY1A2P33402 732 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 KCNJ6P48051 423 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 SEPT2Q15019 361 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 KIAA1755Q5JYT7 1200 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 MAMDC4Q6UXC1 1216 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 NOL8Q76FK4 1167 aaKnown RBP13.86□□□□□ -0.19
GPN3-208ENST00000550974 DGLUCYQ7Z3D6 616 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 ADSSL1Q8N142 457 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 SPATA5Q8NB90 893 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 PABPC5Q96DU9 382 aaKnown RBP13.86□□□□□ -0.19
GPN3-208ENST00000550974 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.86□□□□□ -0.19
GPN3-208ENST00000550974 TECTAO75443 2155 aa13.86□□□□□ -0.19
GPN3-208ENST00000550974 CACNA1FO60840 1977 aa13.85□□□□□ -0.19
GPN3-208ENST00000550974 KDM4AO75164 1064 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms