RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 ANKRD45Q5TZF3 282 aa23.7■■□□□ 1.38
DDX11-220ENST00000542244 ARRDC4Q8NCT1 418 aa23.7■■□□□ 1.38
DDX11-220ENST00000542244 FGD4Q96M96 766 aa23.7■■□□□ 1.38
DDX11-220ENST00000542244 SLC5A4Q9NY91 659 aa23.7■■□□□ 1.38
DDX11-220ENST00000542244 SMCHD1A6NHR9 2005 aa23.7■■□□□ 1.38
DDX11-220ENST00000542244 MYH4Q9Y623 1939 aa23.69■■□□□ 1.38
DDX11-220ENST00000542244 PLXNA1Q9UIW2 1896 aa23.69■■□□□ 1.38
DDX11-220ENST00000542244 ERC2O15083 957 aa23.69■■□□□ 1.38
DDX11-220ENST00000542244 NMT2O60551 498 aa23.69■■□□□ 1.38
DDX11-220ENST00000542244 TFAP4Q01664 338 aa23.69■■□□□ 1.38
DDX11-220ENST00000542244 LRIT3Q3SXY7 679 aa23.69■■□□□ 1.38
DDX11-220ENST00000542244 SH3RF1Q7Z6J0 888 aa23.69■■□□□ 1.38
DDX11-220ENST00000542244 NEDD1Q8NHV4 660 aa23.69■■□□□ 1.38
DDX11-220ENST00000542244 DNAJC25-GNG10A0A024R161 153 aa23.68■■□□□ 1.38
DDX11-220ENST00000542244 KBTBD13C9JR72 458 aa23.68■■□□□ 1.38
DDX11-220ENST00000542244 SNAI1O95863 264 aaPredicted RBP23.68■■□□□ 1.38
DDX11-220ENST00000542244 PRPF38AQ8NAV1 312 aaKnown RBP23.68■■□□□ 1.38
DDX11-220ENST00000542244 TEX13BQ9BXU2 312 aa23.68■■□□□ 1.38
DDX11-220ENST00000542244 NAPBQ9H115 298 aa23.68■■□□□ 1.38
DDX11-220ENST00000542244 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.68■■□□□ 1.38
DDX11-220ENST00000542244 PLIN4Q96Q06 1357 aa23.67■■□□□ 1.38
DDX11-220ENST00000542244 TTLL1O95922 423 aa23.67■■□□□ 1.38
DDX11-220ENST00000542244 SNAP25P60880 206 aa23.67■■□□□ 1.38
DDX11-220ENST00000542244 SNX17Q15036 470 aa23.67■■□□□ 1.38
DDX11-220ENST00000542244 SLFN13Q68D06 897 aa23.67■■□□□ 1.38
DDX11-220ENST00000542244 SLC38A10Q9HBR0 1119 aa23.67■■□□□ 1.38
DDX11-220ENST00000542244 XPNPEP3Q9NQH7 507 aa23.67■■□□□ 1.38
DDX11-220ENST00000542244 IL17RBQ9NRM6 502 aa23.67■■□□□ 1.38
DDX11-220ENST00000542244 DIS3Q9Y2L1 958 aaKnown RBP23.67■■□□□ 1.38
DDX11-220ENST00000542244 LTBP2Q14767 1821 aa23.66■■□□□ 1.38
DDX11-220ENST00000542244 TRIM43BA6NCK2 446 aa23.66■■□□□ 1.38
DDX11-220ENST00000542244 ADCY6O43306 1168 aa23.66■■□□□ 1.38
DDX11-220ENST00000542244 GMCL1P1Q8NEA9 526 aa23.66■■□□□ 1.38
DDX11-220ENST00000542244 TRIM43Q96BQ3 446 aaPredicted RBP23.66■■□□□ 1.38
DDX11-220ENST00000542244 MYADML2A6NDP7 307 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 ATP2A1O14983 1001 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 TSPY3P0CV98 308 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 TSPY8P0CW00 308 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 ITGB8P26012 769 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 DEFB123Q8N688 67 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 FAM227BQ96M60 508 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 NACAP1Q9BZK3 213 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 PHF24Q9UPV7 400 aa23.65■■□□□ 1.38
DDX11-220ENST00000542244 DDX49Q9Y6V7 483 aaKnown RBP23.65■■□□□ 1.38
DDX11-220ENST00000542244 ZBED4O75132 1171 aa23.64■■□□□ 1.37
DDX11-220ENST00000542244 ADAMTS4O75173 837 aa23.64■■□□□ 1.37
DDX11-220ENST00000542244 BMP3P12645 472 aa23.64■■□□□ 1.37
DDX11-220ENST00000542244 PDE1AP54750 535 aa23.64■■□□□ 1.37
DDX11-220ENST00000542244 PRDM5Q9NQX1 630 aaPredicted RBP23.64■■□□□ 1.37
DDX11-220ENST00000542244 PDLIM7Q9NR12 457 aa23.64■■□□□ 1.37
DDX11-220ENST00000542244 FEM1BQ9UK73 627 aa23.64■■□□□ 1.37
DDX11-220ENST00000542244 ZNF536O15090 1300 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 A0A0D9SFI3 127 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 TMEM232C9JQI7 657 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 RARBP10826 455 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 MCCP23508 829 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 CNTN2Q02246 1040 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 TLE2Q04725 743 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 PDE4BQ07343 736 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 C9orf50Q5SZB4 431 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 BADQ92934 168 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 DDX11Q96FC9 970 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 AGBL1Q96MI9 1066 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 HOMER2Q9NSB8 354 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 NRBP1Q9UHY1 535 aa23.63■■□□□ 1.37
DDX11-220ENST00000542244 COL6A3P12111 3177 aa23.62■■□□□ 1.37
DDX11-220ENST00000542244 PTGS1P23219 599 aa23.62■■□□□ 1.37
DDX11-220ENST00000542244 COPB2P35606 906 aa23.62■■□□□ 1.37
DDX11-220ENST00000542244 LRRFIP1Q32MZ4 808 aaKnown RBP23.62■■□□□ 1.37
DDX11-220ENST00000542244 KCTD1Q719H9 257 aa23.62■■□□□ 1.37
DDX11-220ENST00000542244 YTHDC1Q96MU7 727 aaKnown RBP23.62■■□□□ 1.37
DDX11-220ENST00000542244 LBHD1Q9BQE6 289 aaPredicted RBP23.62■■□□□ 1.37
DDX11-220ENST00000542244 ZNF287Q9HBT7 754 aa23.62■■□□□ 1.37
DDX11-220ENST00000542244 HDAC1Q13547 482 aaPredicted RBP23.61■■□□□ 1.37
DDX11-220ENST00000542244 SHHQ15465 462 aa23.61■■□□□ 1.37
DDX11-220ENST00000542244 MAMDC4Q6UXC1 1216 aa23.61■■□□□ 1.37
DDX11-220ENST00000542244 MTMR10Q9NXD2 777 aa23.61■■□□□ 1.37
DDX11-220ENST00000542244 ZHX1Q9UKY1 873 aaPredicted RBP23.61■■□□□ 1.37
DDX11-220ENST00000542244 ISY1Q9ULR0 285 aaKnown RBP23.61■■□□□ 1.37
DDX11-220ENST00000542244 MTMR7Q9Y216 660 aa23.61■■□□□ 1.37
DDX11-220ENST00000542244 SYNRGQ9UMZ2 1314 aa23.6■■□□□ 1.37
DDX11-220ENST00000542244 A0A1W2PQ45 241 aaPredicted RBP23.6■■□□□ 1.37
DDX11-220ENST00000542244 A0A1W2PQY0 241 aa23.6■■□□□ 1.37
DDX11-220ENST00000542244 AKR1A1P14550 325 aa23.6■■□□□ 1.37
DDX11-220ENST00000542244 ZNF589Q86UQ0 364 aaPredicted RBP23.6■■□□□ 1.37
DDX11-220ENST00000542244 EVI5LQ96CN4 794 aa23.6■■□□□ 1.37
DDX11-220ENST00000542244 LNPKQ9C0E8 428 aa23.6■■□□□ 1.37
DDX11-220ENST00000542244 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.6■■□□□ 1.37
DDX11-220ENST00000542244 CNPY2Q9Y2B0 182 aa23.6■■□□□ 1.37
DDX11-220ENST00000542244 EPHB4P54760 987 aa23.59■■□□□ 1.37
DDX11-220ENST00000542244 CCSAPQ6IQ19 270 aaPredicted RBP23.59■■□□□ 1.37
DDX11-220ENST00000542244 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.59■■□□□ 1.37
DDX11-220ENST00000542244 ANKRD35Q8N283 1001 aa23.59■■□□□ 1.37
DDX11-220ENST00000542244 KLHDC9Q8NEP7 349 aa23.59■■□□□ 1.37
DDX11-220ENST00000542244 GMCL1Q96IK5 515 aa23.59■■□□□ 1.37
DDX11-220ENST00000542244 KATNBL1Q9H079 304 aa23.59■■□□□ 1.37
DDX11-220ENST00000542244 SYNPO2Q9UMS6 1093 aa23.59■■□□□ 1.37
DDX11-220ENST00000542244 STX8Q9UNK0 236 aa23.59■■□□□ 1.37
DDX11-220ENST00000542244 CTDP1Q9Y5B0 961 aaPredicted RBP23.59■■□□□ 1.37
DDX11-220ENST00000542244 ASTN1O14525 1302 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms