RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 GOPCQ9HD26 462 aa13.21□□□□□ -0.29
IGHV1-17-201ENST00000520119 GSG1L2A8MUP6 293 aa13.2□□□□□ -0.3
IGHV1-17-201ENST00000520119 CYBAP13498 195 aa13.2□□□□□ -0.3
IGHV1-17-201ENST00000520119 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
IGHV1-17-201ENST00000520119 GNAT2P19087 354 aa13.2□□□□□ -0.3
IGHV1-17-201ENST00000520119 OSBP2Q969R2 916 aa13.2□□□□□ -0.3
IGHV1-17-201ENST00000520119 MKNK2Q9HBH9 465 aa13.2□□□□□ -0.3
IGHV1-17-201ENST00000520119 ADAMTS5Q9UNA0 930 aa13.2□□□□□ -0.3
IGHV1-17-201ENST00000520119 FRMPD3Q5JV73 1810 aa13.2□□□□□ -0.3
IGHV1-17-201ENST00000520119 PARP14Q460N5 1801 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 COBLO75128 1261 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 FCER1AP12319 257 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 SYN1P17600 705 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 TMEM132BQ14DG7 1078 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 LRRC26Q2I0M4 334 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 TPRNQ4KMQ1 711 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 TRPV1Q8NER1 839 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 ZNFX1Q9P2E3 1918 aaKnown RBP13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 ROBO3Q96MS0 1386 aa13.19□□□□□ -0.3
IGHV1-17-201ENST00000520119 TTC41PQ6P2S7 1318 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 MINDY4BA8MYZ0 360 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 DNM1LO00429 736 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 ERC2O15083 957 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 SEPT4O43236 478 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 GPAA1O43292 621 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 RAD21O60216 631 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 RASA1P20936 1047 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 COPB2P35606 906 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 MAGEA10P43363 369 aaPredicted RBP13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 TSHZ3Q63HK5 1081 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 RIOX2Q8IUF8 465 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 ARRDC4Q8NCT1 418 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 SENP6Q9GZR1 1112 aaPredicted RBP13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 FBXO28Q9NVF7 368 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 NYAP2Q9P242 653 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 PPP1R9AQ9ULJ8 1098 aa13.18□□□□□ -0.3
IGHV1-17-201ENST00000520119 GREB1LQ9C091 1923 aaPredicted RBP13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 VWA5AO00534 786 aa13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 SOX1O00570 391 aaPredicted RBP13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 APPP05067 770 aa13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 STAT3P40763 770 aa13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 TDO2P48775 406 aa13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 FAM83BQ5T0W9 1011 aa13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 MAML3Q96JK9 1138 aa13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 NRBP1Q9UHY1 535 aa13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 COL11A1P12107 1806 aaPredicted RBP13.17□□□□□ -0.3
IGHV1-17-201ENST00000520119 PATL2C9JE40 543 aaKnown RBP13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 KCTD2Q14681 263 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 LRIT3Q3SXY7 679 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 TDHQ8IZJ6 230 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 ZNF444Q8N0Y2 327 aaPredicted RBP13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 STK11IPQ8N1F8 1099 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 MMP19Q99542 508 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 SLF1Q9BQI6 1058 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 NACAP1Q9BZK3 213 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 UBE2OQ9C0C9 1292 aaKnown RBP13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 EPB41L4AQ9HCS5 686 aaPredicted RBP13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 ZNF214Q9UL59 606 aaPredicted RBP13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 DIS3Q9Y2L1 958 aaKnown RBP13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 PCDHB15Q9Y5E8 787 aa13.16□□□□□ -0.3
IGHV1-17-201ENST00000520119 SMCHD1A6NHR9 2005 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 KBTBD13C9JR72 458 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 F5H6K3 240 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 M0R2C6 588 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 KLRC3Q07444 240 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 GJC2Q5T442 439 aaPredicted RBP13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 IFNL3Q8IZI9 196 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 PRPF38AQ8NAV1 312 aaKnown RBP13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 REPS2Q8NFH8 660 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 PI4K2BQ8TCG2 481 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 MKL1Q969V6 931 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 TEX13BQ9BXU2 312 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 CLIP2Q9UDT6 1046 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 SYNPO2Q9UMS6 1093 aa13.15□□□□□ -0.3
IGHV1-17-201ENST00000520119 IGKV6D-41A0A0C4DH26 115 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 NDUFB10O96000 172 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 SLC3A2P08195 630 aaKnown RBP13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 PDE4BQ07343 736 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 ZNF792Q3KQV3 632 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 PRAMEF19Q5SWL8 479 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 NUP88Q99567 741 aaPredicted RBP13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 TINF2Q9BSI4 451 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 FSD1Q9BTV5 496 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 MTMR4Q9NYA4 1195 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 PRKAG2Q9UGJ0 569 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 COL6A3P12111 3177 aa13.14□□□□□ -0.31
IGHV1-17-201ENST00000520119 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 PLXNA1Q9UIW2 1896 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 ATP2A1O14983 1001 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 ZBED4O75132 1171 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 PRDM1O75626 825 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 TTLL1O95922 423 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 PGK2P07205 417 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 MX1P20591 662 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 RTP1P59025 263 aa13.13□□□□□ -0.31
IGHV1-17-201ENST00000520119 MDM2Q00987 491 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms