RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 PCSK9Q8NBP7 692 aaKnown RBP11.83□□□□□ -0.52
PTPN20-228ENST00000513266 AGBL1Q96MI9 1066 aa11.83□□□□□ -0.52
PTPN20-228ENST00000513266 PRRX2Q99811 253 aa11.83□□□□□ -0.52
PTPN20-228ENST00000513266 TRIM34Q9BYJ4 488 aa11.83□□□□□ -0.52
PTPN20-228ENST00000513266 TRIP12Q14669 1992 aaPredicted RBP11.83□□□□□ -0.52
PTPN20-228ENST00000513266 NCOR2Q9Y618 2525 aa11.83□□□□□ -0.52
PTPN20-228ENST00000513266 ATG2AQ2TAZ0 1938 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 SNAI1O95863 264 aaPredicted RBP11.82□□□□□ -0.52
PTPN20-228ENST00000513266 IRS1P35568 1242 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 BMP8AQ7Z5Y6 402 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 MAPKAPK5Q8IW41 473 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 NEK9Q8TD19 979 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 SLC9A7Q96T83 725 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 UPF3AQ9H1J1 476 aaKnown RBP11.82□□□□□ -0.52
PTPN20-228ENST00000513266 HOXC10Q9NYD6 342 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 MUTYHQ9UIF7 546 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 FAM184BQ9ULE4 1060 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 CNPY2Q9Y2B0 182 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 DIS3Q9Y2L1 958 aaKnown RBP11.82□□□□□ -0.52
PTPN20-228ENST00000513266 FLT1P17948 1338 aa11.82□□□□□ -0.52
PTPN20-228ENST00000513266 LCHNA4D1U4 455 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 H3BQ06 376 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-228ENST00000513266 CTAGE5O15320 804 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 RGS20O76081 388 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 GSTO1P78417 241 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 PUS10Q3MIT2 529 aaKnown RBP11.81□□□□□ -0.52
PTPN20-228ENST00000513266 HERC4Q5GLZ8 1057 aaPredicted RBP11.81□□□□□ -0.52
PTPN20-228ENST00000513266 TBC1D9Q6ZT07 1266 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 ASCL5Q7RTU5 278 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 HERC6Q8IVU3 1022 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 TGFBRAP1Q8WUH2 860 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 MMP19Q99542 508 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 SIL1Q9H173 461 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 TRPV6Q9H1D0 765 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 CEP126Q9P2H0 1117 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 PRKAG3Q9UGI9 489 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 GRIN2DO15399 1336 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 WDR87Q6ZQQ6 2873 aa11.81□□□□□ -0.52
PTPN20-228ENST00000513266 DMXL1Q9Y485 3027 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 B4GALT4O60513 344 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 ID4P47928 161 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 GJA9P57773 515 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 GNASQ5JWF2 1037 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 TATDN1Q6P1N9 297 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 PI16Q6UXB8 463 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 DEFB128Q7Z7B8 93 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 ADHFE1Q8IWW8 467 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 MB21D1Q8N884 522 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 CCER1Q8TC90 406 aaPredicted RBP11.8□□□□□ -0.52
PTPN20-228ENST00000513266 PHOSPHO2Q8TCD6 241 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 TANGO6Q9C0B7 1094 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 SUGCTQ9HAC7 445 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 SAP30BPQ9UHR5 308 aaKnown RBP11.8□□□□□ -0.52
PTPN20-228ENST00000513266 ACACBO00763 2458 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 MYH8P13535 1937 aa11.8□□□□□ -0.52
PTPN20-228ENST00000513266 PKD1L2Q7Z442 2459 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 MED19A0JLT2 244 aaPredicted RBP11.79□□□□□ -0.52
PTPN20-228ENST00000513266 PFKMP08237 780 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 DSG3P32926 999 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 GUCY1A2P33402 732 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 KIAA1755Q5JYT7 1200 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 EDAQ92838 391 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 PBXIP1Q96AQ6 731 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 ATG4CQ96DT6 458 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 UPF3BQ9BZI7 483 aaKnown RBP11.79□□□□□ -0.52
PTPN20-228ENST00000513266 AATFQ9NY61 560 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTPN20-228ENST00000513266 ZHX1Q9UKY1 873 aaPredicted RBP11.79□□□□□ -0.52
PTPN20-228ENST00000513266 FANCIQ9NVI1 1328 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 ZNF292O60281 2723 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 CHD6Q8TD26 2715 aa11.79□□□□□ -0.52
PTPN20-228ENST00000513266 CHD8Q9HCK8 2581 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 DMDP11532 3685 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 A0A1W2PRG0 241 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 SOWAHBA6NEL2 793 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 KIF28PB7ZC32 967 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 PROB1E7EW31 1015 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 CIAO1O76071 339 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 BEX3Q00994 111 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 ITGA7Q13683 1181 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 TMEM132BQ14DG7 1078 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 CXCL17Q6UXB2 119 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 ATOH1Q92858 354 aaPredicted RBP11.78□□□□□ -0.52
PTPN20-228ENST00000513266 SPC25Q9HBM1 224 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 RAI14Q9P0K7 980 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 HMG20BQ9P0W2 317 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 MTUS1Q9ULD2 1270 aa11.78□□□□□ -0.52
PTPN20-228ENST00000513266 CFAP47Q6ZTR5 3102 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 PRR23AA6NEV1 266 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 TMEM221A6NGB7 291 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 M0R296 226 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 SLC25A27O95847 323 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 HLA-DOAP06340 250 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 TIMM10P62072 90 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 NKX3-2P78367 333 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 KCTD2Q14681 263 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 PKN1Q16512 942 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
PTPN20-228ENST00000513266 CCDC144BQ3MJ40 725 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms