RNA–Protein interactions for RNA: ENST00000497469.5

RNF220-218, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-218ENST00000497469 PCSK9Q8NBP7 692 aaKnown RBP17.62■□□□□ 0.41
RNF220-218ENST00000497469 AGBL1Q96MI9 1066 aa17.62■□□□□ 0.41
RNF220-218ENST00000497469 FAM184BQ9ULE4 1060 aa17.62■□□□□ 0.41
RNF220-218ENST00000497469 B4GALT4O60513 344 aa17.61■□□□□ 0.41
RNF220-218ENST00000497469 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
RNF220-218ENST00000497469 GNASQ5JWF2 1037 aa17.61■□□□□ 0.41
RNF220-218ENST00000497469 ADSSL1Q8N142 457 aa17.61■□□□□ 0.41
RNF220-218ENST00000497469 SH3RF3Q8TEJ3 882 aaPredicted RBP17.61■□□□□ 0.41
RNF220-218ENST00000497469 MMP19Q99542 508 aa17.61■□□□□ 0.41
RNF220-218ENST00000497469 MROH8Q9H579 483 aa17.61■□□□□ 0.41
RNF220-218ENST00000497469 KDM4AO75164 1064 aa17.6■□□□□ 0.41
RNF220-218ENST00000497469 USP14P54578 494 aa17.6■□□□□ 0.41
RNF220-218ENST00000497469 BEX3Q00994 111 aa17.6■□□□□ 0.41
RNF220-218ENST00000497469 RASGRF1Q13972 1273 aa17.6■□□□□ 0.41
RNF220-218ENST00000497469 PKN1Q16512 942 aa17.6■□□□□ 0.41
RNF220-218ENST00000497469 ATP2B3Q16720 1220 aa17.6■□□□□ 0.41
RNF220-218ENST00000497469 RMDN1Q96DB5 314 aa17.6■□□□□ 0.41
RNF220-218ENST00000497469 SCN5AQ14524 2016 aa17.6■□□□□ 0.41
RNF220-218ENST00000497469 DUSP11O75319 330 aaKnown RBP17.59■□□□□ 0.41
RNF220-218ENST00000497469 ADORA1P30542 326 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 CLUL1Q15846 466 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 ZNF792Q3KQV3 632 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 MAPKAPK5Q8IW41 473 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 TANGO6Q9C0B7 1094 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 KIAA1683Q9H0B3 1180 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 IRF2BPLQ9H1B7 796 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 GINM1Q9NU53 330 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 FAM50BQ9Y247 325 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 VPS13AQ96RL7 3174 aa17.59■□□□□ 0.41
RNF220-218ENST00000497469 TPRP12270 2363 aaKnown RBP17.59■□□□□ 0.41
RNF220-218ENST00000497469 CHD6Q8TD26 2715 aa17.58■□□□□ 0.41
RNF220-218ENST00000497469 ATRXP46100 2492 aa17.58■□□□□ 0.41
RNF220-218ENST00000497469 GVINP1Q7Z2Y8 2422 aa17.58■□□□□ 0.41
RNF220-218ENST00000497469 DMXL1Q9Y485 3027 aa17.58■□□□□ 0.4
RNF220-218ENST00000497469 SEMA3EO15041 775 aa17.58■□□□□ 0.4
RNF220-218ENST00000497469 RABL6Q3YEC7 729 aaPredicted RBP17.58■□□□□ 0.4
RNF220-218ENST00000497469 SLC4A10Q6U841 1118 aa17.58■□□□□ 0.4
RNF220-218ENST00000497469 CXCL17Q6UXB2 119 aa17.58■□□□□ 0.4
RNF220-218ENST00000497469 PHOSPHO2Q8TCD6 241 aa17.58■□□□□ 0.4
RNF220-218ENST00000497469 SAP30BPQ9UHR5 308 aaKnown RBP17.58■□□□□ 0.4
RNF220-218ENST00000497469 PALD1Q9ULE6 856 aa17.58■□□□□ 0.4
RNF220-218ENST00000497469 ADAMTS8Q9UP79 889 aa17.58■□□□□ 0.4
RNF220-218ENST00000497469 ACTN1P12814 892 aa17.57■□□□□ 0.4
RNF220-218ENST00000497469 AVPR2P30518 371 aa17.57■□□□□ 0.4
RNF220-218ENST00000497469 COG2Q14746 738 aa17.57■□□□□ 0.4
RNF220-218ENST00000497469 WDR43Q15061 677 aaKnown RBP eCLIP17.57■□□□□ 0.4
RNF220-218ENST00000497469 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
RNF220-218ENST00000497469 SLC43A3Q8NBI5 491 aa17.57■□□□□ 0.4
RNF220-218ENST00000497469 DHX36Q9H2U1 1008 aaKnown RBP17.57■□□□□ 0.4
RNF220-218ENST00000497469 PTPRSQ13332 1948 aa17.57■□□□□ 0.4
RNF220-218ENST00000497469 ZNFX1Q9P2E3 1918 aaKnown RBP17.57■□□□□ 0.4
RNF220-218ENST00000497469 GRIN2DO15399 1336 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 RBAK-RBAKDNI3L0D1 243 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 EYA2O00167 538 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 APAF1O14727 1248 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 SNAI1O95863 264 aaPredicted RBP17.56■□□□□ 0.4
RNF220-218ENST00000497469 PFKMP08237 780 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 CYP2C9P11712 490 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 SPTY2D1Q68D10 685 aaPredicted RBP17.56■□□□□ 0.4
RNF220-218ENST00000497469 CCDC102BQ68D86 513 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 ATG4CQ96DT6 458 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 UPF3AQ9H1J1 476 aaKnown RBP17.56■□□□□ 0.4
RNF220-218ENST00000497469 SPC25Q9HBM1 224 aa17.56■□□□□ 0.4
RNF220-218ENST00000497469 CDK5RAP2Q96SN8 1893 aa17.55■□□□□ 0.4
RNF220-218ENST00000497469 CTAGE5O15320 804 aa17.55■□□□□ 0.4
RNF220-218ENST00000497469 GJA9P57773 515 aa17.55■□□□□ 0.4
RNF220-218ENST00000497469 ITGA7Q13683 1181 aa17.55■□□□□ 0.4
RNF220-218ENST00000497469 FRMD5Q7Z6J6 570 aa17.55■□□□□ 0.4
RNF220-218ENST00000497469 METTL16Q86W50 562 aaKnown RBP17.55■□□□□ 0.4
RNF220-218ENST00000497469 TGFBRAP1Q8WUH2 860 aa17.55■□□□□ 0.4
RNF220-218ENST00000497469 HOXC10Q9NYD6 342 aa17.55■□□□□ 0.4
RNF220-218ENST00000497469 FLT1P17948 1338 aa17.54■□□□□ 0.4
RNF220-218ENST00000497469 NBL1P41271 181 aa17.54■□□□□ 0.4
RNF220-218ENST00000497469 PSMC6P62333 389 aa17.54■□□□□ 0.4
RNF220-218ENST00000497469 ZXDAP98168 799 aa17.54■□□□□ 0.4
RNF220-218ENST00000497469 ATG9AQ7Z3C6 839 aa17.54■□□□□ 0.4
RNF220-218ENST00000497469 FOXP4Q8IVH2 680 aaPredicted RBP17.54■□□□□ 0.4
RNF220-218ENST00000497469 TGS1Q96RS0 853 aaKnown RBP17.54■□□□□ 0.4
RNF220-218ENST00000497469 POP1Q99575 1024 aaKnown RBP17.54■□□□□ 0.4
RNF220-218ENST00000497469 ZBED2Q9BTP6 218 aa17.54■□□□□ 0.4
RNF220-218ENST00000497469 FTOQ9C0B1 505 aaKnown RBP eCLIP17.54■□□□□ 0.4
RNF220-218ENST00000497469 ACACBO00763 2458 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 ALDH1L1O75891 902 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 ERVK-21P61565 698 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 ST3GAL2Q16842 350 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 TCEAL5Q5H9L2 206 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 TBC1D9Q6ZT07 1266 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 NSUN4Q96CB9 384 aaKnown RBP17.53■□□□□ 0.4
RNF220-218ENST00000497469 PABPC5Q96DU9 382 aaKnown RBP17.53■□□□□ 0.4
RNF220-218ENST00000497469 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 SIL1Q9H173 461 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 CLDND1Q9NY35 253 aa17.53■□□□□ 0.4
RNF220-218ENST00000497469 MAP4K4O95819 1239 aaPredicted RBP17.52■□□□□ 0.4
RNF220-218ENST00000497469 PTGS1P23219 599 aa17.52■□□□□ 0.4
RNF220-218ENST00000497469 DSG3P32926 999 aa17.52■□□□□ 0.4
RNF220-218ENST00000497469 TMEM132BQ14DG7 1078 aa17.52■□□□□ 0.4
RNF220-218ENST00000497469 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.4
RNF220-218ENST00000497469 NKD2Q969F2 451 aaPredicted RBP17.52■□□□□ 0.4
RNF220-218ENST00000497469 TRMT13Q9NUP7 481 aaKnown RBP17.52■□□□□ 0.4
RNF220-218ENST00000497469 AATFQ9NY61 560 aaKnown RBP eCLIP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms