RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 MLECQ14165 292 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ODF1Q14990 250 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 PTPN21Q16825 1174 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 LONRF1Q17RB8 773 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 COBLL1Q53SF7 1204 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 CCDC93Q567U6 631 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 C1QTNF12Q5T7M4 302 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 L1TD1Q5T7N2 865 aaKnown RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 SAMD5Q5TGI4 173 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 LLGL2Q6P1M3 1020 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 MPRIPQ6WCQ1 1025 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 BICDL1Q6ZP65 573 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 NLRC3Q7RTR2 1065 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 KRT77Q7Z794 578 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ANKLE2Q86XL3 938 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 SULF2Q8IWU5 870 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 CNPY4Q8N129 248 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 FAM43AQ8N2R8 423 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 PDILTQ8N807 584 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 PPHLN1Q8NEY8 458 aaKnown RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 PI4K2BQ8TCG2 481 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 SKA1Q96BD8 255 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 AIDAQ96BJ3 306 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ERP27Q96DN0 273 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 CLIP3Q96DZ5 547 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 FUBP3Q96I24 572 aaKnown RBP eCLIP2.37□□□□□ -2.03
UBR4-217ENST00000497018 MPP4Q96JB8 637 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 NUP88Q99567 741 aaPredicted RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 TTC1Q99614 292 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 CDC6Q99741 560 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 SELENOOQ9BVL4 669 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 NAA15Q9BXJ9 866 aaKnown RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 ZCCHC2Q9C0B9 1178 aaKnown RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 SLC12A5Q9H2X9 1139 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 VTA1Q9NP79 307 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 GMIPQ9P107 970 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 FNIP2Q9P278 1114 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 APEX2Q9UBZ4 518 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 REV1Q9UBZ9 1251 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 POLG2Q9UHN1 485 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 GJD2Q9UKL4 321 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ASAP1Q9ULH1 1129 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 DNM3Q9UQ16 869 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ANKRD6Q9Y2G4 727 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 GIT1Q9Y2X7 761 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 PCDHGB3Q9Y5G1 929 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 CORINQ9Y5Q5 1042 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 GJA3Q9Y6H8 435 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 FRMPD2Q68DX3 1309 aaPredicted RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 PITPNM2Q9BZ72 1349 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 ARAP3Q8WWN8 1544 aa2.37□□□□□ -2.03
UBR4-217ENST00000497018 POLR1AO95602 1720 aaPredicted RBP2.37□□□□□ -2.03
UBR4-217ENST00000497018 SYNMO15061 1565 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 NWD1Q149M9 1564 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 CD109Q6YHK3 1445 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 A0A1W2PNR3 127 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 TCRBV16S1A1N1A0A5B0 115 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 SLC22A31A6NKX4 558 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ZNF891A8MT65 544 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 CBX4O00257 560 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 EFSO43281 561 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 TBX1O43435 398 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 CBFA2T2O43439 604 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PCDHGA12O60330 932 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 SASH3O75995 380 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 MAP3K6O95382 1288 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 MT-CO1P00395 513 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 LTFP02788 710 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ITGAVP06756 1048 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 JMJD7P0C870 316 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PABPC1P11940 636 aaKnown RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 TARSP26639 723 aaKnown RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 ARNTP27540 789 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 CYP2C19P33261 490 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 IGFALSP35858 605 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 RECQLP46063 649 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 RXRGP48443 463 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 RENBPP51606 427 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 RELBQ01201 579 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 SLC7A5Q01650 507 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 DSG1Q02413 1049 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 CHAF1AQ13111 956 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 KLF1Q13351 362 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 NNTQ13423 1086 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 HSP90AA2PQ14568 343 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 LRRC14Q15048 493 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 PCBP2Q15366 365 aaKnown RBP eCLIP2.36□□□□□ -2.03
UBR4-217ENST00000497018 ELF2Q15723 593 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 NTRK3Q16288 839 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ZNF423Q2M1K9 1284 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 SLC4A8Q2Y0W8 1093 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ARSJQ5FYB0 599 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 TMEM201Q5SNT2 666 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 JAKMIP3Q5VZ66 844 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 DUSP27Q5VZP5 1158 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 CDCA2Q69YH5 1023 aaPredicted RBP2.36□□□□□ -2.03
UBR4-217ENST00000497018 MZT2AQ6P582 158 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 ABHD17CQ6PCB6 329 aa2.36□□□□□ -2.03
UBR4-217ENST00000497018 MMS22LQ6ZRQ5 1243 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms