RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 RFX5P48382 616 aaPredicted RBP15.04■□□□□ -0
ATPAF1-205ENST00000487193 ASCL5Q7RTU5 278 aa15.04■□□□□ -0
ATPAF1-205ENST00000487193 SUGP1Q8IWZ8 645 aaKnown RBP15.04■□□□□ -0
ATPAF1-205ENST00000487193 AGBL1Q96MI9 1066 aa15.04■□□□□ -0
ATPAF1-205ENST00000487193 SLC9A7Q96T83 725 aa15.04■□□□□ -0
ATPAF1-205ENST00000487193 AATFQ9NY61 560 aaKnown RBP eCLIP15.04■□□□□ -0
ATPAF1-205ENST00000487193 ACTN1P12814 892 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 TIMM10P62072 90 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 BEX3Q00994 111 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 KCTD2Q14681 263 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 CCDC27Q2M243 656 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 PHOSPHO2Q8TCD6 241 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 SUGCTQ9HAC7 445 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 DIS3Q9Y2L1 958 aaKnown RBP15.03■□□□□ -0
ATPAF1-205ENST00000487193 SCN5AQ14524 2016 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 CACNA1BQ00975 2339 aa15.03■□□□□ -0
ATPAF1-205ENST00000487193 FLT1P17948 1338 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 CACNA1GO43497 2377 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 LCHNA4D1U4 455 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 TMEM221A6NGB7 291 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 M0R296 226 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 ADCY6O43306 1168 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 B4GALT4O60513 344 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 SNAI1O95863 264 aaPredicted RBP15.02■□□□□ -0
ATPAF1-205ENST00000487193 HLA-DOAP06340 250 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 DSG3P32926 999 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 GJA9P57773 515 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 CXCL17Q6UXB2 119 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 BMP8AQ7Z5Y6 402 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 ADHFE1Q8IWW8 467 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 MB21D1Q8N884 522 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 NEK9Q8TD19 979 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 EDAQ92838 391 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 ATG4CQ96DT6 458 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 PRKAG3Q9UGI9 489 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 TRPC6Q9Y210 931 aa15.02■□□□□ -0
ATPAF1-205ENST00000487193 COL4A6Q14031 1691 aa15.02□□□□□ -0.01
ATPAF1-205ENST00000487193 PTPRZ1P23471 2315 aaPredicted RBP15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 PLXNA3P51805 1871 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 PDS5AQ29RF7 1337 aaKnown RBP15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 MED19A0JLT2 244 aaPredicted RBP15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 H0Y858 1186 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 SLC25A27O95847 323 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 PFKMP08237 780 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 ITGA7Q13683 1181 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 ABCB5Q2M3G0 1257 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 CERKLQ49MI3 558 aaPredicted RBP15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 HERC4Q5GLZ8 1057 aaPredicted RBP15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 SLC43A3Q8NBI5 491 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 TLR9Q9NR96 1032 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 FAM50BQ9Y247 325 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 MYO15AQ9UKN7 3530 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 TECTAO75443 2155 aa15.01□□□□□ -0.01
ATPAF1-205ENST00000487193 FLOT1O75955 427 aa15□□□□□ -0.01
ATPAF1-205ENST00000487193 TMEM132BQ14DG7 1078 aa15□□□□□ -0.01
ATPAF1-205ENST00000487193 PKN1Q16512 942 aa15□□□□□ -0.01
ATPAF1-205ENST00000487193 PI16Q6UXB8 463 aa15□□□□□ -0.01
ATPAF1-205ENST00000487193 ATF7IPQ6VMQ6 1270 aa15□□□□□ -0.01
ATPAF1-205ENST00000487193 TMCO2Q7Z6W1 182 aaPredicted RBP15□□□□□ -0.01
ATPAF1-205ENST00000487193 RNF135Q8IUD6 432 aa15□□□□□ -0.01
ATPAF1-205ENST00000487193 ZBED2Q9BTP6 218 aa15□□□□□ -0.01
ATPAF1-205ENST00000487193 FTOQ9C0B1 505 aaKnown RBP eCLIP15□□□□□ -0.01
ATPAF1-205ENST00000487193 UPF3AQ9H1J1 476 aaKnown RBP15□□□□□ -0.01
ATPAF1-205ENST00000487193 CABP5Q9NP86 173 aa15□□□□□ -0.01
ATPAF1-205ENST00000487193 KMT2EQ8IZD2 1858 aa14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 BAG3O95817 575 aa14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 ACVR2BQ13705 512 aa14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 CCDC144BQ3MJ40 725 aa14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 TATDN1Q6P1N9 297 aa14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 TRIM67Q6ZTA4 783 aa14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 IRF2BPLQ9H1B7 796 aa14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 ALG13Q9NP73 1137 aaKnown RBP14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 HMG20BQ9P0W2 317 aa14.99□□□□□ -0.01
ATPAF1-205ENST00000487193 GRIN2DO15399 1336 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 ZBTB22O15209 634 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 CTAGE5O15320 804 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 CYP2C9P11712 490 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 PSMC6P62333 389 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 EXOSC9Q06265 439 aaKnown RBP14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 KIAA1755Q5JYT7 1200 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 FBXL6Q8N531 539 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 CNTNAP3BQ96NU0 1288 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 CNTNAP3Q9BZ76 1288 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 LRP2BPQ9P2M1 347 aa14.98□□□□□ -0.01
ATPAF1-205ENST00000487193 COL11A1P12107 1806 aaPredicted RBP14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 A0A1W2PRG0 241 aa14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 PRR23AA6NEV1 266 aa14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 PLCG2P16885 1265 aa14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 VCPP55072 806 aaKnown RBP14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 SEPT2Q15019 361 aa14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 NOL8Q76FK4 1167 aaKnown RBP14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 SPATA5Q8NB90 893 aa14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 XAGE2Q96GT9 111 aa14.97□□□□□ -0.01
ATPAF1-205ENST00000487193 PTPRSQ13332 1948 aa14.96□□□□□ -0.01
ATPAF1-205ENST00000487193 CIAO1O76071 339 aa14.96□□□□□ -0.01
ATPAF1-205ENST00000487193 GUCY1A2P33402 732 aa14.96□□□□□ -0.01
ATPAF1-205ENST00000487193 MSL3Q8N5Y2 521 aaKnown RBP14.96□□□□□ -0.01
ATPAF1-205ENST00000487193 TGS1Q96RS0 853 aaKnown RBP14.96□□□□□ -0.01
ATPAF1-205ENST00000487193 FOCADQ5VW36 1801 aa14.96□□□□□ -0.01
ATPAF1-205ENST00000487193 FANCIQ9NVI1 1328 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms