RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 SLC43A3Q8NBI5 491 aa19.99■□□□□ 0.79
SF3B4-202ENST00000457312 UPF3AQ9H1J1 476 aaKnown RBP19.99■□□□□ 0.79
SF3B4-202ENST00000457312 FAM184BQ9ULE4 1060 aa19.99■□□□□ 0.79
SF3B4-202ENST00000457312 CHD8Q9HCK8 2581 aa19.99■□□□□ 0.79
SF3B4-202ENST00000457312 ACACBO00763 2458 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 VPS13AQ96RL7 3174 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 LDHCP07864 332 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 IRS1P35568 1242 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 GSTO1P78417 241 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 HERC4Q5GLZ8 1057 aaPredicted RBP19.98■□□□□ 0.79
SF3B4-202ENST00000457312 MAPKAPK5Q8IW41 473 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 NEK9Q8TD19 979 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 AGBL1Q96MI9 1066 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 PRKAG3Q9UGI9 489 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 MUTYHQ9UIF7 546 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 PALD1Q9ULE6 856 aa19.98■□□□□ 0.79
SF3B4-202ENST00000457312 DIS3Q9Y2L1 958 aaKnown RBP19.98■□□□□ 0.79
SF3B4-202ENST00000457312 VAMP4O75379 141 aa19.97■□□□□ 0.79
SF3B4-202ENST00000457312 PFKMP08237 780 aa19.97■□□□□ 0.79
SF3B4-202ENST00000457312 ID4P47928 161 aa19.97■□□□□ 0.79
SF3B4-202ENST00000457312 HERC6Q8IVU3 1022 aa19.97■□□□□ 0.79
SF3B4-202ENST00000457312 MB21D1Q8N884 522 aa19.97■□□□□ 0.79
SF3B4-202ENST00000457312 MMP19Q99542 508 aa19.97■□□□□ 0.79
SF3B4-202ENST00000457312 HOXC10Q9NYD6 342 aa19.97■□□□□ 0.79
SF3B4-202ENST00000457312 H3BQ06 376 aaPredicted RBP19.96■□□□□ 0.79
SF3B4-202ENST00000457312 RAB3GAP1Q15042 981 aa19.96■□□□□ 0.79
SF3B4-202ENST00000457312 ASCL5Q7RTU5 278 aa19.96■□□□□ 0.79
SF3B4-202ENST00000457312 ADHFE1Q8IWW8 467 aa19.96■□□□□ 0.79
SF3B4-202ENST00000457312 PHOSPHO2Q8TCD6 241 aa19.96■□□□□ 0.79
SF3B4-202ENST00000457312 TANGO6Q9C0B7 1094 aa19.96■□□□□ 0.79
SF3B4-202ENST00000457312 ZHX1Q9UKY1 873 aaPredicted RBP19.96■□□□□ 0.79
SF3B4-202ENST00000457312 DNAH14Q0VDD8 3507 aa19.95■□□□□ 0.78
SF3B4-202ENST00000457312 RGS20O76081 388 aa19.95■□□□□ 0.78
SF3B4-202ENST00000457312 GJA9P57773 515 aa19.95■□□□□ 0.78
SF3B4-202ENST00000457312 TGFBRAP1Q8WUH2 860 aa19.95■□□□□ 0.78
SF3B4-202ENST00000457312 UPF3BQ9BZI7 483 aaKnown RBP19.95■□□□□ 0.78
SF3B4-202ENST00000457312 CEP126Q9P2H0 1117 aa19.95■□□□□ 0.78
SF3B4-202ENST00000457312 MED19A0JLT2 244 aaPredicted RBP19.94■□□□□ 0.78
SF3B4-202ENST00000457312 LCHNA4D1U4 455 aa19.94■□□□□ 0.78
SF3B4-202ENST00000457312 CTAGE5O15320 804 aa19.94■□□□□ 0.78
SF3B4-202ENST00000457312 B4GALT4O60513 344 aa19.94■□□□□ 0.78
SF3B4-202ENST00000457312 SNAI1O95863 264 aaPredicted RBP19.94■□□□□ 0.78
SF3B4-202ENST00000457312 PKN1Q16512 942 aa19.94■□□□□ 0.78
SF3B4-202ENST00000457312 GNASQ5JWF2 1037 aa19.94■□□□□ 0.78
SF3B4-202ENST00000457312 SIL1Q9H173 461 aa19.94■□□□□ 0.78
SF3B4-202ENST00000457312 TRPV6Q9H1D0 765 aa19.94■□□□□ 0.78
SF3B4-202ENST00000457312 SOWAHBA6NEL2 793 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 KIF28PB7ZC32 967 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 PROB1E7EW31 1015 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 TATDN1Q6P1N9 297 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 DEFB128Q7Z7B8 93 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 ATOH1Q92858 354 aaPredicted RBP19.93■□□□□ 0.78
SF3B4-202ENST00000457312 PBXIP1Q96AQ6 731 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 ATG4CQ96DT6 458 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 SUGCTQ9HAC7 445 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 SPC25Q9HBM1 224 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 SAP30BPQ9UHR5 308 aaKnown RBP19.93■□□□□ 0.78
SF3B4-202ENST00000457312 FANCIQ9NVI1 1328 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 ATRXP46100 2492 aa19.93■□□□□ 0.78
SF3B4-202ENST00000457312 DMXL1Q9Y485 3027 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 CFAP47Q6ZTR5 3102 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 TMEM221A6NGB7 291 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 M0R296 226 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 CIAO1O76071 339 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 HLA-DOAP06340 250 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 DSG3P32926 999 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 PI16Q6UXB8 463 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 TBC1D9Q6ZT07 1266 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 SUGP1Q8IWZ8 645 aaKnown RBP19.92■□□□□ 0.78
SF3B4-202ENST00000457312 CCER1Q8TC90 406 aaPredicted RBP19.92■□□□□ 0.78
SF3B4-202ENST00000457312 EDAQ92838 391 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 AATFQ9NY61 560 aaKnown RBP eCLIP19.92■□□□□ 0.78
SF3B4-202ENST00000457312 GRIN2DO15399 1336 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 MYO7AQ13402 2215 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 CHD6Q8TD26 2715 aa19.92■□□□□ 0.78
SF3B4-202ENST00000457312 PRR23AA6NEV1 266 aa19.91■□□□□ 0.78
SF3B4-202ENST00000457312 SLC25A27O95847 323 aa19.91■□□□□ 0.78
SF3B4-202ENST00000457312 ACTN1P12814 892 aa19.91■□□□□ 0.78
SF3B4-202ENST00000457312 KCTD2Q14681 263 aa19.91■□□□□ 0.78
SF3B4-202ENST00000457312 MSL3Q8N5Y2 521 aaKnown RBP19.91■□□□□ 0.78
SF3B4-202ENST00000457312 RAI14Q9P0K7 980 aa19.91■□□□□ 0.78
SF3B4-202ENST00000457312 MYO5AQ9Y4I1 1855 aaKnown RBP19.9■□□□□ 0.78
SF3B4-202ENST00000457312 GUCY1A2P33402 732 aa19.9■□□□□ 0.78
SF3B4-202ENST00000457312 ITGA7Q13683 1181 aa19.9■□□□□ 0.78
SF3B4-202ENST00000457312 TMEM132BQ14DG7 1078 aa19.9■□□□□ 0.78
SF3B4-202ENST00000457312 CXCL17Q6UXB2 119 aa19.9■□□□□ 0.78
SF3B4-202ENST00000457312 ATF7IPQ6VMQ6 1270 aa19.9■□□□□ 0.78
SF3B4-202ENST00000457312 MTUS1Q9ULD2 1270 aa19.9■□□□□ 0.78
SF3B4-202ENST00000457312 FAM50BQ9Y247 325 aa19.9■□□□□ 0.78
SF3B4-202ENST00000457312 NKX3-2P78367 333 aa19.89■□□□□ 0.77
SF3B4-202ENST00000457312 BEX3Q00994 111 aa19.89■□□□□ 0.77
SF3B4-202ENST00000457312 ABCB5Q2M3G0 1257 aa19.89■□□□□ 0.77
SF3B4-202ENST00000457312 TRIM67Q6ZTA4 783 aa19.89■□□□□ 0.77
SF3B4-202ENST00000457312 NOL10Q9BSC4 688 aaKnown RBP19.89■□□□□ 0.77
SF3B4-202ENST00000457312 IRF2BPLQ9H1B7 796 aa19.89■□□□□ 0.77
SF3B4-202ENST00000457312 HMG20BQ9P0W2 317 aa19.89■□□□□ 0.77
SF3B4-202ENST00000457312 FBXO3Q9UK99 471 aa19.89■□□□□ 0.77
SF3B4-202ENST00000457312 ATG2AQ2TAZ0 1938 aa19.88■□□□□ 0.77
SF3B4-202ENST00000457312 A0A1W2PRG0 241 aa19.88■□□□□ 0.77
SF3B4-202ENST00000457312 PLCG2P16885 1265 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms