RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 ZNF236Q9UL36 1845 aa13.66□□□□□ -0.22
IRF1-204ENST00000439555 COBLO75128 1261 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 STAT3P40763 770 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 PLS1Q14651 629 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 FAM83BQ5T0W9 1011 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 NCAPG2Q86XI2 1143 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 SMC5Q8IY18 1101 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
IRF1-204ENST00000439555 NEDD1Q8NHV4 660 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 BADQ92934 168 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 RWDD1Q9H446 243 aaPredicted RBP13.65□□□□□ -0.22
IRF1-204ENST00000439555 FBXO28Q9NVF7 368 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 CLIP2Q9UDT6 1046 aa13.65□□□□□ -0.22
IRF1-204ENST00000439555 ZNF214Q9UL59 606 aaPredicted RBP13.65□□□□□ -0.22
IRF1-204ENST00000439555 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
IRF1-204ENST00000439555 PLIN4Q96Q06 1357 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 ATP2A1O14983 1001 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 TTLL1O95922 423 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 NDUFB10O96000 172 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 CYBAP13498 195 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 CYP2C19P33261 490 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 PPARAQ07869 468 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 ALX1Q15699 326 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 GMCL1P1Q8NEA9 526 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 REPS2Q8NFH8 660 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 ATXN2LQ8WWM7 1075 aaKnown RBP13.64□□□□□ -0.23
IRF1-204ENST00000439555 CEP95Q96GE4 821 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 SLF1Q9BQI6 1058 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 HELLSQ9NRZ9 838 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 NRBP1Q9UHY1 535 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 ATP11BQ9Y2G3 1177 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 NCOR1O75376 2440 aa13.64□□□□□ -0.23
IRF1-204ENST00000439555 TSPY3P0CV98 308 aa13.63□□□□□ -0.23
IRF1-204ENST00000439555 TSPY8P0CW00 308 aa13.63□□□□□ -0.23
IRF1-204ENST00000439555 FDX1P10109 184 aa13.63□□□□□ -0.23
IRF1-204ENST00000439555 CNGA1P29973 690 aa13.63□□□□□ -0.23
IRF1-204ENST00000439555 TEX13BQ9BXU2 312 aa13.63□□□□□ -0.23
IRF1-204ENST00000439555 ANAPC4Q9UJX5 808 aa13.63□□□□□ -0.23
IRF1-204ENST00000439555 TACC3Q9Y6A5 838 aa13.63□□□□□ -0.23
IRF1-204ENST00000439555 PLXNA1Q9UIW2 1896 aa13.63□□□□□ -0.23
IRF1-204ENST00000439555 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.62□□□□□ -0.23
IRF1-204ENST00000439555 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.62□□□□□ -0.23
IRF1-204ENST00000439555 KBTBD13C9JR72 458 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 FOXP2O15409 715 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 SEPT4O43236 478 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 RAD21O60216 631 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 PRDM1O75626 825 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 FGRP09769 529 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 PLA2G5P39877 138 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 TFAP4Q01664 338 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 KCTD2Q14681 263 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 GJC2Q5T442 439 aaPredicted RBP13.62□□□□□ -0.23
IRF1-204ENST00000439555 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
IRF1-204ENST00000439555 STK11IPQ8N1F8 1099 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 TRPV1Q8NER1 839 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 MAML3Q96JK9 1138 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 MMP19Q99542 508 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 PDLIM7Q9NR12 457 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 FEM1BQ9UK73 627 aa13.62□□□□□ -0.23
IRF1-204ENST00000439555 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
IRF1-204ENST00000439555 TRIM43BA6NCK2 446 aa13.61□□□□□ -0.23
IRF1-204ENST00000439555 ZBED4O75132 1171 aa13.61□□□□□ -0.23
IRF1-204ENST00000439555 OAZ1P54368 228 aa13.61□□□□□ -0.23
IRF1-204ENST00000439555 ZNF792Q3KQV3 632 aa13.61□□□□□ -0.23
IRF1-204ENST00000439555 MCMDC2Q4G0Z9 681 aa13.61□□□□□ -0.23
IRF1-204ENST00000439555 SAMD1Q6SPF0 538 aaPredicted RBP13.61□□□□□ -0.23
IRF1-204ENST00000439555 MSL3Q8N5Y2 521 aaKnown RBP13.61□□□□□ -0.23
IRF1-204ENST00000439555 TRIM43Q96BQ3 446 aaPredicted RBP13.61□□□□□ -0.23
IRF1-204ENST00000439555 GMCL1Q96IK5 515 aa13.61□□□□□ -0.23
IRF1-204ENST00000439555 YTHDC1Q96MU7 727 aaKnown RBP13.61□□□□□ -0.23
IRF1-204ENST00000439555 NUP88Q99567 741 aaPredicted RBP13.61□□□□□ -0.23
IRF1-204ENST00000439555 OSBPL3Q9H4L5 887 aa13.61□□□□□ -0.23
IRF1-204ENST00000439555 ARIH1Q9Y4X5 557 aaPredicted RBP13.61□□□□□ -0.23
IRF1-204ENST00000439555 A0A0G2JMZ2 1700 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 PLA2G6O60733 806 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 NOVP48745 357 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 NUCB1Q02818 461 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 GRIN2CQ14957 1233 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 TRIM60Q495X7 471 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 AKNAD1Q5T1N1 836 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 LNPKQ9C0E8 428 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 SLC38A10Q9HBR0 1119 aa13.6□□□□□ -0.23
IRF1-204ENST00000439555 PRDM5Q9NQX1 630 aaPredicted RBP13.6□□□□□ -0.23
IRF1-204ENST00000439555 BAZ2AQ9UIF9 1905 aaKnown RBP13.6□□□□□ -0.23
IRF1-204ENST00000439555 MYH7P12883 1935 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 DNAJC25-GNG10A0A024R161 153 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 KIAA0355O15063 1070 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 ORC4O43929 436 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 BMP3P12645 472 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 FAM47AQ5JRC9 791 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 SLFN13Q68D06 897 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 CCDC129Q6ZRS4 1044 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 SH3RF1Q7Z6J0 888 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 FAM160B2Q86V87 743 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 CHD1LQ86WJ1 897 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 CHURC1Q8WUH1 139 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 RNPC3Q96LT9 517 aaKnown RBP13.59□□□□□ -0.23
IRF1-204ENST00000439555 TINF2Q9BSI4 451 aa13.59□□□□□ -0.23
IRF1-204ENST00000439555 FBXO40Q9UH90 709 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms