RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 SLFN14P0C7P3 912 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 TAB2Q9NYJ8 693 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 WNT7AO00755 349 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 TTLL1O95922 423 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 PPP4CP60510 307 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 NEK8Q86SG6 692 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 CNKSR1Q969H4 720 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 CLSTN1O94985 981 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 MTIF2P46199 727 aaKnown RBP13.73□□□□□ -0.21
CLDN4-203ENST00000435050 DNAI1Q9UI46 699 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 PCDHAC2Q9Y5I4 1007 aa13.73□□□□□ -0.21
CLDN4-203ENST00000435050 TAF1P21675 1872 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 ICA1Q05084 483 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 PDE4DQ08499 809 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 CDC42EP5Q6NZY7 148 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 SYT10Q6XYQ8 523 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 BMP2KQ9NSY1 1161 aaPredicted RBP13.72□□□□□ -0.21
CLDN4-203ENST00000435050 RMND1Q9NWS8 449 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 EZH2Q15910 746 aaKnown RBP13.72□□□□□ -0.21
CLDN4-203ENST00000435050 CALCRLQ16602 461 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 FOXP4Q8IVH2 680 aaPredicted RBP13.72□□□□□ -0.21
CLDN4-203ENST00000435050 LRWD1Q9UFC0 647 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 TUBGCP6Q96RT7 1819 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 IPO7O95373 1038 aaKnown RBP13.72□□□□□ -0.21
CLDN4-203ENST00000435050 OR52Z1P0C646 297 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 MRPL12P52815 198 aaKnown RBP13.72□□□□□ -0.21
CLDN4-203ENST00000435050 CUL4BQ13620 913 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 PYM1Q9BRP8 204 aaKnown RBP13.72□□□□□ -0.21
CLDN4-203ENST00000435050 HDAC9Q9UKV0 1011 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 PLCH1Q4KWH8 1693 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 KRT79Q5XKE5 535 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 PROM2Q8N271 834 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 MAD2L2Q9UI95 211 aa13.72□□□□□ -0.21
CLDN4-203ENST00000435050 FAM205AQ6ZU69 1335 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 LTBP4Q8N2S1 1624 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 PSMA7O14818 248 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 C16orf86Q6ZW13 317 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 NELFBQ8WX92 580 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 PRIMPOLQ96LW4 560 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 DDX4Q9NQI0 724 aaKnown RBP13.71□□□□□ -0.21
CLDN4-203ENST00000435050 FMR1Q06787 632 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLDN4-203ENST00000435050 DLGAP5Q15398 846 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 TCEAL9Q9UHQ7 104 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 HPSEQ9Y251 543 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 GDAQ9Y2T3 454 aa13.71□□□□□ -0.21
CLDN4-203ENST00000435050 IL1R1P14778 569 aa13.71□□□□□ -0.22
CLDN4-203ENST00000435050 SEPT2Q15019 361 aa13.71□□□□□ -0.22
CLDN4-203ENST00000435050 MIGA2Q7L4E1 593 aa13.71□□□□□ -0.22
CLDN4-203ENST00000435050 IGSF22Q8N9C0 903 aa13.71□□□□□ -0.22
CLDN4-203ENST00000435050 TMEM60Q9H2L4 133 aa13.71□□□□□ -0.22
CLDN4-203ENST00000435050 BARHL2Q9NY43 387 aa13.71□□□□□ -0.22
CLDN4-203ENST00000435050 USP27XA6NNY8 438 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 AMPD3Q01432 767 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 PAK1Q13153 545 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 ENOX2Q16206 610 aaKnown RBP13.7□□□□□ -0.22
CLDN4-203ENST00000435050 SARM1Q6SZW1 724 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 PODNQ7Z5L7 613 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 CERS5Q8N5B7 392 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 PSTPIP2Q9H939 334 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 TBC1D7Q9P0N9 293 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 PCDHA1Q9Y5I3 950 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 IKBKBO14920 756 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 GNG11P61952 73 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 UBXN1Q04323 297 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 TYW1BQ6NUM6 668 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 DEFB132Q7Z7B7 95 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 ZNF277Q9NRM2 450 aaPredicted RBP13.7□□□□□ -0.22
CLDN4-203ENST00000435050 ATF5Q9Y2D1 282 aaPredicted RBP13.7□□□□□ -0.22
CLDN4-203ENST00000435050 CUL5Q93034 780 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 ZSWIM4Q9H7M6 989 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 MTMR4Q9NYA4 1195 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 PCDHA6Q9UN73 950 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 ZBTB12Q9Y330 459 aaPredicted RBP13.7□□□□□ -0.22
CLDN4-203ENST00000435050 PCDHA8Q9Y5H6 950 aa13.7□□□□□ -0.22
CLDN4-203ENST00000435050 SPDYE3A6NKU9 549 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 RPN1P04843 607 aaKnown RBP13.69□□□□□ -0.22
CLDN4-203ENST00000435050 ATP2C1P98194 919 aaPredicted RBP13.69□□□□□ -0.22
CLDN4-203ENST00000435050 ABCB5Q2M3G0 1257 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 CRY2Q49AN0 593 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 CCDC174Q6PII3 467 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 BAG1Q99933 345 aaPredicted RBP13.69□□□□□ -0.22
CLDN4-203ENST00000435050 DESI2Q9BSY9 194 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 OSBPL5Q9H0X9 879 aaPredicted RBP13.69□□□□□ -0.22
CLDN4-203ENST00000435050 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.69□□□□□ -0.22
CLDN4-203ENST00000435050 LZTFL1Q9NQ48 299 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 PKD2L1Q9P0L9 805 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 GJA3Q9Y6H8 435 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 CYTH3O43739 400 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 EPS15P42566 896 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 ARHGAP29Q52LW3 1261 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 ZNF579Q8NAF0 562 aaKnown RBP13.69□□□□□ -0.22
CLDN4-203ENST00000435050 RGL2O15211 777 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 MYO1BO43795 1136 aa13.69□□□□□ -0.22
CLDN4-203ENST00000435050 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms