RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 NUP88Q99567 741 aaPredicted RBP19.09■□□□□ 0.65
DDR1-230ENST00000412274 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.09■□□□□ 0.659e-6■■■■■ 32.4
DDR1-230ENST00000412274 SLC38A10Q9HBR0 1119 aa19.09■□□□□ 0.65
DDR1-230ENST00000412274 TACC3Q9Y6A5 838 aa19.09■□□□□ 0.65
DDR1-230ENST00000412274 LAMA4Q16363 1823 aa19.09■□□□□ 0.65
DDR1-230ENST00000412274 TMEM232C9JQI7 657 aa19.08■□□□□ 0.64
DDR1-230ENST00000412274 ADORA2AP29274 412 aa19.08■□□□□ 0.64
DDR1-230ENST00000412274 OLFML2BQ68BL8 750 aa19.08■□□□□ 0.64
DDR1-230ENST00000412274 TBC1D10CQ8IV04 446 aa19.08■□□□□ 0.64
DDR1-230ENST00000412274 KIFC2Q96AC6 838 aa19.08■□□□□ 0.64
DDR1-230ENST00000412274 CCDC136Q96JN2 1154 aa19.08■□□□□ 0.64
DDR1-230ENST00000412274 NBPF3Q9H094 633 aa19.08■□□□□ 0.64
DDR1-230ENST00000412274 FBXO40Q9UH90 709 aa19.08■□□□□ 0.64
DDR1-230ENST00000412274 DIS3Q9Y2L1 958 aaKnown RBP19.08■□□□□ 0.64
DDR1-230ENST00000412274 U3KPZ7 1027 aaPredicted RBP19.08■□□□□ 0.64
DDR1-230ENST00000412274 SGSM2O43147 1006 aa19.07■□□□□ 0.64
DDR1-230ENST00000412274 TFRCP02786 760 aaKnown RBP19.07■□□□□ 0.64
DDR1-230ENST00000412274 MCCP23508 829 aa19.07■□□□□ 0.64
DDR1-230ENST00000412274 IKQ13123 557 aaPredicted RBP19.07■□□□□ 0.64
DDR1-230ENST00000412274 KCTD2Q14681 263 aa19.07■□□□□ 0.64
DDR1-230ENST00000412274 BMP2KLQ5H9B9 411 aa19.07■□□□□ 0.64
DDR1-230ENST00000412274 ANKLE1Q8NAG6 615 aa19.07■□□□□ 0.64
DDR1-230ENST00000412274 CRISPLD2Q9H0B8 497 aa19.07■□□□□ 0.64
DDR1-230ENST00000412274 PNMA2Q9UL42 364 aa19.07■□□□□ 0.64
DDR1-230ENST00000412274 KIAA0100Q14667 2235 aaKnown RBP19.06■□□□□ 0.64
DDR1-230ENST00000412274 NMT2O60551 498 aa19.06■□□□□ 0.64
DDR1-230ENST00000412274 MSCO60682 206 aa19.06■□□□□ 0.64
DDR1-230ENST00000412274 PRKAR2AP13861 404 aaKnown RBP19.06■□□□□ 0.64
DDR1-230ENST00000412274 TRDNQ13061 729 aa19.06■□□□□ 0.64
DDR1-230ENST00000412274 ERICH6BQ5W0A0 696 aa19.06■□□□□ 0.64
DDR1-230ENST00000412274 SNRNP48Q6IEG0 339 aaKnown RBP19.06■□□□□ 0.64
DDR1-230ENST00000412274 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.06■□□□□ 0.64
DDR1-230ENST00000412274 CHST13Q8NET6 341 aa19.06■□□□□ 0.64
DDR1-230ENST00000412274 DEFB118Q96PH6 123 aa19.06■□□□□ 0.64
DDR1-230ENST00000412274 MMP19Q99542 508 aa19.06■□□□□ 0.64
DDR1-230ENST00000412274 TMEM47Q9BQJ4 181 aa19.06■□□□□ 0.64
DDR1-230ENST00000412274 ISY1Q9ULR0 285 aaKnown RBP19.06■□□□□ 0.64
DDR1-230ENST00000412274 CACNB2Q08289 660 aaPredicted RBP19.05■□□□□ 0.64
DDR1-230ENST00000412274 TKFCQ3LXA3 575 aa19.05■□□□□ 0.64
DDR1-230ENST00000412274 KIAA1211Q6ZU35 1233 aa19.05■□□□□ 0.64
DDR1-230ENST00000412274 ANKS1AQ92625 1134 aa19.05■□□□□ 0.64
DDR1-230ENST00000412274 COL11A1P12107 1806 aaPredicted RBP19.04■□□□□ 0.64
DDR1-230ENST00000412274 NEDD4P46934 1319 aa19.04■□□□□ 0.64
DDR1-230ENST00000412274 KDM4AO75164 1064 aa19.04■□□□□ 0.64
DDR1-230ENST00000412274 CENPBP07199 599 aaPredicted RBP19.04■□□□□ 0.64
DDR1-230ENST00000412274 GPATCH4Q5T3I0 446 aaKnown RBP19.04■□□□□ 0.64
DDR1-230ENST00000412274 CASC1Q6TDU7 716 aa19.04■□□□□ 0.64
DDR1-230ENST00000412274 BTNL9Q6UXG8 535 aa19.04■□□□□ 0.64
DDR1-230ENST00000412274 MSL3Q8N5Y2 521 aaKnown RBP19.04■□□□□ 0.64
DDR1-230ENST00000412274 SHISA4Q96DD7 197 aa19.04■□□□□ 0.64
DDR1-230ENST00000412274 NRBP1Q9UHY1 535 aa19.04■□□□□ 0.64
DDR1-230ENST00000412274 IGHA2P01877 340 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 CCL14Q16627 93 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 CCDC96Q2M329 555 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 KCTD1Q719H9 257 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 NPLOC4Q8TAT6 608 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 MAP4K1Q92918 833 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 ZSCAN10Q96SZ4 725 aaPredicted RBP19.03■□□□□ 0.64
DDR1-230ENST00000412274 UBAC1Q9BSL1 405 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 HTATIP2Q9BUP3 242 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 KAT14Q9H8E8 782 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 ZSWIM5Q9P217 1185 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 BRCA2P51587 3418 aa19.03■□□□□ 0.64
DDR1-230ENST00000412274 B4E1Z4 1266 aa19.02■□□□□ 0.64
DDR1-230ENST00000412274 SNHG28P0DPA3 235 aa19.02■□□□□ 0.64
DDR1-230ENST00000412274 TRIM32Q13049 653 aa19.02■□□□□ 0.64
DDR1-230ENST00000412274 CPXCR1Q8N123 301 aa19.02■□□□□ 0.64
DDR1-230ENST00000412274 DDX11Q96FC9 970 aa19.02■□□□□ 0.64
DDR1-230ENST00000412274 IL25Q9H293 177 aa19.02■□□□□ 0.64
DDR1-230ENST00000412274 OGDHLQ9ULD0 1010 aa19.02■□□□□ 0.64
DDR1-230ENST00000412274 COBLO75128 1261 aa19.01■□□□□ 0.63
DDR1-230ENST00000412274 FARP2O94887 1054 aaPredicted RBP19.01■□□□□ 0.63
DDR1-230ENST00000412274 PDHBP11177 359 aa19.01■□□□□ 0.63
DDR1-230ENST00000412274 UBE2Q1Q7Z7E8 422 aa19.01■□□□□ 0.63
DDR1-230ENST00000412274 MAML3Q96JK9 1138 aa19.01■□□□□ 0.63
DDR1-230ENST00000412274 RAVER2Q9HCJ3 691 aaKnown RBP19.01■□□□□ 0.63
DDR1-230ENST00000412274 PRR12Q9ULL5 1215 aa19.01■□□□□ 0.63
DDR1-230ENST00000412274 CYP21A2P08686 494 aa19■□□□□ 0.63
DDR1-230ENST00000412274 PTH1RQ03431 593 aa19■□□□□ 0.63
DDR1-230ENST00000412274 ZNF792Q3KQV3 632 aa19■□□□□ 0.63
DDR1-230ENST00000412274 PRPF38BQ5VTL8 546 aaKnown RBP19■□□□□ 0.63
DDR1-230ENST00000412274 ZNF467Q7Z7K2 595 aaPredicted RBP19■□□□□ 0.63
DDR1-230ENST00000412274 RALYLQ86SE5 291 aaKnown RBP19■□□□□ 0.63
DDR1-230ENST00000412274 ANKRD35Q8N283 1001 aa19■□□□□ 0.63
DDR1-230ENST00000412274 PNMA1Q8ND90 353 aa19■□□□□ 0.63
DDR1-230ENST00000412274 ACAD9Q9H845 621 aa19■□□□□ 0.63
DDR1-230ENST00000412274 FLRT1Q9NZU1 646 aa19■□□□□ 0.63
DDR1-230ENST00000412274 TNRC18O15417 2968 aaPredicted RBP19■□□□□ 0.63
DDR1-230ENST00000412274 ERICH2A1L162 156 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 ZNF543Q08ER8 600 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 SART3Q15020 963 aaKnown RBP18.99■□□□□ 0.63
DDR1-230ENST00000412274 SYDE2Q5VT97 1194 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 NECAB2Q7Z6G3 386 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 NCOA7Q8NI08 942 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 ZKSCAN3Q9BRR0 538 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 ESYT1Q9BSJ8 1104 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 MTA3Q9BTC8 594 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 MAF1Q9H063 256 aa18.99■□□□□ 0.63
DDR1-230ENST00000412274 RANBP17Q9H2T7 1088 aaKnown RBP18.99■□□□□ 0.63
DDR1-230ENST00000412274 MTMR7Q9Y216 660 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms