RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 RESP18Q5W5W9 173 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 DHX40Q8IX18 779 aaKnown RBP17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 CYP4A11Q02928 519 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 PDE4DQ08499 809 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 CUL4BQ13620 913 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 PPP2R5BQ15173 497 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 PTPAQ15257 358 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 SYT10Q6XYQ8 523 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 MNS1Q8NEH6 495 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 KCNF1Q9H3M0 494 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 LRWD1Q9UFC0 647 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 PCDHA4Q9UN74 947 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 SRPRBQ9Y5M8 271 aaKnown RBP17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 HS1BP3Q53T59 392 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 TYW1BQ6NUM6 668 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 EXOC1Q9NV70 894 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 FBXO2Q9UK22 296 aaPredicted RBP17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 SAMM50Q9Y512 469 aa17.95■□□□□ 0.46
SMARCD1-202ENST00000394963 BAG6P46379 1132 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 IQCB1Q15051 598 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 CEP135Q66GS9 1140 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 SNX29Q8TEQ0 813 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 CNKSR1Q969H4 720 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 LRP6O75581 1613 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 CNTNAP5Q8WYK1 1306 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 POTEMA6NI47 508 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 ORC4O43929 436 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 EPS15P42566 896 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 TBC1D10BQ4KMP7 808 aaPredicted RBP17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 CABP7Q86V35 215 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 PSTPIP2Q9H939 334 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 FAM205AQ6ZU69 1335 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 TTLL1O95922 423 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 CALCRLQ16602 461 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 FOXP4Q8IVH2 680 aaPredicted RBP17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 SLC39A2Q9NP94 309 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 RNF216Q9NWF9 866 aaPredicted RBP17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 HDAC9Q9UKV0 1011 aa17.94■□□□□ 0.46
SMARCD1-202ENST00000394963 USP27XA6NNY8 438 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 MYO1BO43795 1136 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 RCSD1Q6JBY9 416 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 LRRC8AQ8IWT6 810 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 NELFCDQ8IXH7 590 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 COL1A1P02452 1464 aaPredicted RBP17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 SPDYE3A6NKU9 549 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 EEF2P13639 858 aaKnown RBP17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 ABCB5Q2M3G0 1257 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 WDR78Q5VTH9 848 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 SLC30A10Q6XR72 485 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 DOT1LQ8TEK3 1739 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 PHF20Q9BVI0 1012 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 ARID5AQ03989 594 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 LRRC41Q15345 812 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 PRR16Q569H4 304 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 CRAMP1Q96RY5 1269 aa17.93■□□□□ 0.46
SMARCD1-202ENST00000394963 TDP2O95551 362 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 BMP15O95972 392 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 KRT79Q5XKE5 535 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 PAGE5Q96GU1 130 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 MAP3K14Q99558 947 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 PKD1L3Q7Z443 1732 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 GPR75-ASB3A0A0A6YYF3 556 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 TRIM49BA6NDI0 452 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 RIOK3O14730 519 aaKnown RBP17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 IPO7O95373 1038 aaKnown RBP17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 NEK8Q86SG6 692 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 FERMT2Q96AC1 680 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 CYTH3O43739 400 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 GNG11P61952 73 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 UBXN1Q04323 297 aa17.92■□□□□ 0.46
SMARCD1-202ENST00000394963 FMR1Q06787 632 aaKnown RBP eCLIP17.92■□□□□ 0.464e-6■■□□□ 12.4
SMARCD1-202ENST00000394963 DDTLA6NHG4 134 aaPredicted RBP17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 SPDYE4A6NLX3 237 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 MEIS1O00470 390 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 TCERG1LQ5VWI1 586 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 TICAM2Q86XR7 235 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 FLAD1Q8NFF5 587 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 MRPL12P52815 198 aaKnown RBP17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 NCAPH2Q6IBW4 605 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 NELFBQ8WX92 580 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 PRMT6Q96LA8 375 aaPredicted RBP17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 ANAPC4Q9UJX5 808 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 POTEDQ86YR6 584 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 NIM1KQ8IY84 436 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 TTLL6Q8N841 843 aa17.91■□□□□ 0.46
SMARCD1-202ENST00000394963 NAA30Q147X3 362 aaPredicted RBP17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 IGSF22Q8N9C0 903 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 NEDD1Q8NHV4 660 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 CUL5Q93034 780 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 RAB34Q9BZG1 259 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 MAD2L2Q9UI95 211 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 STK36Q9NRP7 1315 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 PCP11498 1178 aaKnown RBP17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 GSDMDP57764 484 aa17.9■□□□□ 0.46
SMARCD1-202ENST00000394963 NUP98P52948 1817 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms