RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 LEMD3Q9Y2U8 911 aa8□□□□□ -1.13
NPHP1-203ENST00000393272 PCDHB6Q9Y5E3 794 aa8□□□□□ -1.13
NPHP1-203ENST00000393272 CAPN6Q9Y6Q1 641 aa8□□□□□ -1.13
NPHP1-203ENST00000393272 CDKL5O76039 1030 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 SNUPNO95149 360 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 FGAP02671 866 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 HOXC9P31274 260 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 CARSP49589 748 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 VAV2P52735 878 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 RWDD2BP57060 319 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 KRT83P78385 493 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 ELF3P78545 371 aaPredicted RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 CYP27A1Q02318 531 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 TCP11X2Q5H9J9 407 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 C8orf74Q6P047 294 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 ZNF572Q7Z3I7 529 aaPredicted RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 NCOA7Q8NI08 942 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 SAAL1Q96ER3 474 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 PURBQ96QR8 312 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 NUP58Q9BVL2 599 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 SENP2Q9HC62 589 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 BATF3Q9NR55 127 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 NFU1Q9UMS0 254 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 PLEKHG3A1L390 1219 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 NEURL1BA8MQ27 555 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 KCNJ18B7U540 433 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 MPHOSPH10O00566 681 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 RNF113AO15541 343 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 TNFRSF8P28908 595 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 SSR1P43307 286 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 GUCY2FP51841 1108 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 ITIH3Q06033 890 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 SNX1Q13596 522 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 BYSLQ13895 437 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 KCNJ12Q14500 433 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 NFRKBQ6P4R8 1299 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 APOA5Q6Q788 366 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 ZNF662Q6ZS27 426 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 STAMQ92783 540 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 CUL5Q93034 780 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 NEUROD6Q96NK8 337 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 EBF2Q9HAK2 575 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 TRPC6Q9Y210 931 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 LUC7L2Q9Y383 392 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 GMNCA6NCL1 334 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 SRRM3A6NNA2 597 aaPredicted RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 HMGB1P1B2RPK0 211 aaPredicted RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 GLI1P08151 1106 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 IARSP41252 1262 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 GCKRQ14397 625 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 RBBP5Q15291 538 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 NBPF9Q3BBW0 867 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 GLE1Q53GS7 698 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 MSL1Q68DK7 614 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 CAPRIN2Q6IMN6 1127 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 PPP4R3AQ6IN85 833 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 HIBCHQ6NVY1 386 aaPredicted RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 ZNF579Q8NAF0 562 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 HVCN1Q96D96 273 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 PAGE5Q96GU1 130 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 EPSTI1Q96J88 318 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 SEC16BQ96JE7 1060 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 MYL10Q9BUA6 226 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 RBM12Q9NTZ6 932 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 BSDC1Q9NW68 430 aaPredicted RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 ANGEL1Q9UNK9 670 aaKnown RBP7.99□□□□□ -1.13
NPHP1-203ENST00000393272 C15orf41Q9Y2V0 281 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 L3MBTL1Q9Y468 752 aa7.99□□□□□ -1.13
NPHP1-203ENST00000393272 PIK3C2AO00443 1686 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 TRAPPC3O43617 180 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 SMNDC1O75940 238 aaKnown RBP eCLIP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 NTRK3Q16288 839 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 LACTB2Q53H82 288 aaPredicted RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 THEMIS2Q5TEJ8 643 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 MIS18BP1Q6P0N0 1132 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 RIC3Q7Z5B4 369 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 SH3RF1Q7Z6J0 888 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 CD302Q8IX05 232 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 DIS3L2Q8IYB7 885 aaKnown RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 CACNA2D3Q8IZS8 1091 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 ITFG2Q969R8 447 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 BORCS6Q96GS4 357 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 GSDMAQ96QA5 445 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 OSBPL9Q96SU4 736 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 STRN4Q9NRL3 753 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 VPS54Q9P1Q0 977 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 CPSF2Q9P2I0 782 aaKnown RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 SLC12A6Q9UHW9 1150 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 KCNJ14Q9UNX9 436 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 SRPRBQ9Y5M8 271 aaKnown RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 TECPR2O15040 1411 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 PES1O00541 588 aaKnown RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 DNAJC8O75937 253 aaPredicted RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 IPO7O95373 1038 aaKnown RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 DDX58O95786 925 aaKnown RBP7.98□□□□□ -1.13
NPHP1-203ENST00000393272 TIMM10P62072 90 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 SPAG1Q07617 926 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 NR5A1Q13285 461 aa7.98□□□□□ -1.13
NPHP1-203ENST00000393272 CCDC181Q5TID7 509 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms