RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Mia3Q8BI84 1930 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 PfasQ5SUR0 1337 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ythdc1E9Q5K9 736 aaKnown RBP14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Pde6aP27664 859 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 SqleP52019 572 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ptpn18Q61152 453 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ttc8Q8VD72 515 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Xrn2Q9DBR1 951 aaKnown RBP14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ubiad1Q9DC60 336 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Capn10Q9ESK3 666 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Gm5114W4VSN8 858 aa14.23□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Btg4O70552 250 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Stx8O88983 236 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Kif20aP97329 887 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 NfiaQ02780 532 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Calr4Q3TQS0 420 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ttbk2Q3UVR3 1243 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Depdc1aQ8CIG0 804 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ankrd54Q91WK7 299 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Mrpl11Q9CQF0 192 aaKnown RBP14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ifi202Q9R002 445 aa14.22□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Astn1Q61137 1302 aa14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 SpibO35906 267 aa14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Cyp2c39P56656 490 aa14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Exosc10P56960 887 aaKnown RBP14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Srrm1Q52KI8 946 aaKnown RBP14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Clca4aQ6Q473 924 aa14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Peg10Q7TN75 958 aaKnown RBP14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Hsdl1Q8BTX9 330 aa14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Oxnad1Q8VE38 311 aa14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Smc1bQ920F6 1248 aa14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Dis3Q9CSH3 958 aaKnown RBP14.21□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Gm29094F6Q785 221 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 LdhaP06151 332 aaKnown RBP14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Cst8P32766 142 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Kifap3P70188 793 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Lilrb3P97484 841 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Sap30bpQ02614 308 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Esyt1Q3U7R1 1092 aaKnown RBP14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Prdm1Q60636 856 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Ddx4Q61496 702 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Cnga2Q62398 664 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Zbtb7bQ64321 544 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Usp17leQ7M764 540 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Ttc7aQ8BGB2 858 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Sap130Q8BIH0 1057 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Nup88Q8CEC0 753 aaKnown RBP14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Atf7Q8R0S1 413 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Ttc6G3UYY4 1857 aa14.2□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Sall1Q9ER74 1322 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 1700006A11RikB9EHI3 544 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Slc6a20bO88575 635 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Myl3P09542 204 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 TxnP10639 105 aaKnown RBP14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Bach1P97302 739 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Siah1bQ06985 282 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Rnf20Q5DTM8 973 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 BC048507Q80ZS7 89 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Cyp26b1Q811W2 512 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Pof1bQ8K4L4 587 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Ero1aQ8R180 464 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Odf2lQ9D478 642 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 DcpsQ9DAR7 338 aa14.19□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Trdmt1O55055 415 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Znf326O88291 580 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 CatspereP0DP43 985 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Sept4P28661 478 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 TbcaP48428 108 aaKnown RBP14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 PtpreP49446 699 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Cfap52Q5F201 620 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Nsrp1Q5NCR9 542 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 NfrkbQ6PIJ4 1296 aaKnown RBP14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Ints3Q7TPD0 1041 aaKnown RBP14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Sgsm2Q80U12 1005 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Spata7Q80VP2 582 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Lrrc15Q80X72 579 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Tbc1d10bQ8BHL3 798 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 GlmnQ8BZM1 596 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Ccdc158Q8CDI6 1109 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Rassf8Q8CJ96 419 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Gimap7Q8R379 293 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Zcchc18Q8VD24 393 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Kdm4bQ91VY5 1086 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Tbx20Q9ES03 445 aa14.18□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Lamb2Q61292 1799 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Gm44511A0A0N4SW10 223 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 E030030I06RikJ3QML9 246 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Stag2O35638 1231 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Klrb1bP27812 223 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Irs1P35569 1233 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Adamts10P58459 1104 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Lpar1P61793 364 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Tff2Q03404 129 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Tmtc2Q56A06 836 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Myl10Q62082 202 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Churc1Q6DG52 112 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Gigyf2Q6Y7W8 1291 aaKnown RBP14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Brd2Q7JJ13 798 aaKnown RBP14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Fam126bQ8C729 530 aa14.17□□□□□ -0.14
Ccdc28a-202ENSMUST00000080860 Znf687Q9D2D7 1237 aa14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms