RNA–Protein interactions for RNA: ENSMUST00000005503.3

Msh6-201, Transcript of DNA mismatch repair protein Msh6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msh6, Length 4,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6-201ENSMUST00000005503 Sugp2Q8CH09 1067 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Atp6v0a4Q920R6 833 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Vnn1Q9Z0K8 512 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Krt24A1L317 512 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Parp1P11103 1013 aaKnown RBP14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 RubcnlQ3TD16 648 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 HelbQ6NVF4 1074 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Map10Q8BJS7 891 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Spats2Q8K1N4 545 aaKnown RBP14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Ttc14Q9CSP9 761 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Cul5Q9D5V5 780 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Trp53inp1Q9QXE4 239 aa14.04□□□□□ -0.16
Msh6-201ENSMUST00000005503 Cyp3a25O09158 503 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Cpsf2O35218 782 aaKnown RBP14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Kif5cP28738 956 aaKnown RBP14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Wdr44Q6NVE8 915 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Pabpc4Q6PHQ9 660 aaKnown RBP14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Mroh1E0CZ22 1640 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Ddx23D3Z0M9 819 aaKnown RBP14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Traf1P39428 409 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Trerf1Q8BXJ2 1205 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Spata32Q8C5V0 334 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Shtn1Q8K2Q9 631 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Eif4a3Q91VC3 411 aaKnown RBP14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 RabggtaQ9JHK4 567 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Nmt2O70311 529 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Slc7a1Q09143 622 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Cct6bQ61390 531 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Fam161bQ8CB59 589 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 Ifih1Q8R5F7 1025 aa14.03□□□□□ -0.16
Msh6-201ENSMUST00000005503 1700018F24RikB2RW27 314 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Ppfia4B8QI36 1187 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Tcp10bE9PYJ0 438 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Ncf2O70145 525 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Cep70Q6IQY5 616 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Cacnb1Q8R3Z5 597 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Ugt1a8D3Z748 530 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Ugt1a10E9PXN7 530 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 HelqQ2VPA6 1069 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Acot10Q32MW3 439 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 IqcdQ9D3V1 458 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Nr2e3Q9QXZ7 395 aa14.02□□□□□ -0.16
Msh6-201ENSMUST00000005503 Cdc27A2A6Q5 825 aa14.02□□□□□ -0.17
Msh6-201ENSMUST00000005503 Pth1rP41593 591 aa14.02□□□□□ -0.17
Msh6-201ENSMUST00000005503 Llgl2Q3TJ91 1027 aa14.02□□□□□ -0.17
Msh6-201ENSMUST00000005503 Hook2Q7TMK6 716 aa14.02□□□□□ -0.17
Msh6-201ENSMUST00000005503 Cplx3Q8R1B5 158 aa14.02□□□□□ -0.17
Msh6-201ENSMUST00000005503 TnrQ8BYI9 1358 aa14.02□□□□□ -0.17
Msh6-201ENSMUST00000005503 Cyp2d34L7N463 504 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Stat5bP42232 786 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Plcb3P51432 1234 aaKnown RBP14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Irak1Q62406 710 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Usp50Q6P8X6 390 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tmx4Q8C0L0 335 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Hps4Q99KG7 671 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Dydc2Q9D3X8 139 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Carmil3Q3UFQ8 1375 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rasal2E9PW37 1286 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Slc39a2G3X943 309 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tagap1P0CAX8 505 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ano9P86044 747 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Znf667Q2TL60 609 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Sec31aQ3UPL0 1230 aaKnown RBP14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Mrps31Q61733 384 aaKnown RBP14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Fgfr1opQ66JX5 399 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Aggf1Q7TN31 711 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Depdc1bQ8BH88 529 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Acbd3Q8BMP6 525 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Spata16Q8C636 571 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 ParnQ8VDG3 624 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tpp1O89023 562 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Pla2g4aP47713 748 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 MaeaQ4VC33 396 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Sdccag8Q80UF4 717 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Fgd5Q80UZ0 1219 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Scyl2Q8CFE4 930 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Pdia6Q922R8 440 aaKnown RBP14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Glrx3Q9CQM9 337 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Cabp5Q9JLK3 173 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Apol6B7ZC55 329 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Nr1i2O54915 431 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Copb2O55029 905 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Epha2Q03145 977 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 DSCC1Q14AI0 399 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Kif22Q3V300 660 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Usp13Q5BKP2 858 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Dhx37Q6NZL1 1150 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Camsap3Q80VC9 1252 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Tcp10aQ80W76 438 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Usp27Q8CEG8 438 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Gpr108Q91WD0 569 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Lrp2bpQ9D4C6 346 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Etnk1Q9D4V0 363 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Cetn2Q9R1K9 172 aa14.01□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ercc5P35689 1170 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Hps5P59438 1126 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Sap30bpQ02614 308 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Ttc26Q8BS45 554 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Rcor2Q8C796 523 aa14□□□□□ -0.17
Msh6-201ENSMUST00000005503 Creb3l3Q91XE9 479 aa14□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms