RNA–Protein interactions for RNA: snR40

snR40, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR40, Length 97 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR40snR40 YGR018CP53211 109 aa-1.52□□□□□ -2.65
snR40snR40 YLR455WQ06188 304 aa-1.52□□□□□ -2.65
snR40snR40 FMP25Q08023 583 aa-1.52□□□□□ -2.65
snR40snR40 DCS2Q12123 353 aa-1.52□□□□□ -2.65
snR40snR40 RKM5Q12367 367 aa-1.52□□□□□ -2.65
snR40snR40 ADH1P00330 348 aaKnown RBP-1.53□□□□□ -2.65
snR40snR40 HEM15P16622 393 aa-1.53□□□□□ -2.65
snR40snR40 STE50P25344 346 aa-1.53□□□□□ -2.65
snR40snR40 SDH3P33421 198 aa-1.53□□□□□ -2.65
snR40snR40 PAM1P37304 830 aaKnown RBP-1.53□□□□□ -2.65
snR40snR40 UBP13P38187 747 aa-1.53□□□□□ -2.65
snR40snR40 NPR2P39923 615 aa-1.53□□□□□ -2.65
snR40snR40 MNN5P46982 586 aa-1.53□□□□□ -2.65
snR40snR40 YRB30P53107 440 aaPredicted RBP-1.53□□□□□ -2.65
snR40snR40 MKC7P53379 596 aa-1.53□□□□□ -2.65
snR40snR40 NSE5Q03718 556 aa-1.53□□□□□ -2.65
snR40snR40 MSS11Q03825 758 aa-1.53□□□□□ -2.65
snR40snR40 UBX5Q06682 500 aa-1.53□□□□□ -2.65
snR40snR40 TSR1Q07381 788 aaKnown RBP-1.53□□□□□ -2.65
snR40snR40 GUD1Q07729 489 aa-1.53□□□□□ -2.65
snR40snR40 SSP2Q08646 371 aa-1.53□□□□□ -2.65
snR40snR40 FDH1Q08911 376 aa-1.53□□□□□ -2.65
snR40snR40 TUF1P02992 437 aaKnown RBP-1.54□□□□□ -2.66
snR40snR40 LPD1P09624 499 aaKnown RBP-1.54□□□□□ -2.66
snR40snR40 CPR4P25334 318 aa-1.54□□□□□ -2.66
snR40snR40 ARE1P25628 610 aa-1.54□□□□□ -2.66
snR40snR40 RFC1P38630 861 aaKnown RBP-1.54□□□□□ -2.66
snR40snR40 ERC1P38767 581 aa-1.54□□□□□ -2.66
snR40snR40 YPL107WQ02873 248 aa-1.54□□□□□ -2.66
snR40snR40 YDR109CQ04585 715 aa-1.54□□□□□ -2.66
snR40snR40 YLR407WQ06070 228 aa-1.54□□□□□ -2.66
snR40snR40 OPI10Q08202 246 aa-1.54□□□□□ -2.66
snR40snR40 CBP6P07253 162 aaPredicted RBP-1.55□□□□□ -2.66
snR40snR40 MRP2P10663 115 aaPredicted RBP-1.55□□□□□ -2.66
snR40snR40 DAL2P25335 343 aa-1.55□□□□□ -2.66
snR40snR40 MRP4P32902 394 aa-1.55□□□□□ -2.66
snR40snR40 MTC2P34246 357 aa-1.55□□□□□ -2.66
snR40snR40 MGE1P38523 228 aa-1.55□□□□□ -2.66
snR40snR40 ARO9P38840 513 aaPredicted RBP-1.55□□□□□ -2.66
snR40snR40 ASP1P38986 381 aaPredicted RBP-1.55□□□□□ -2.66
snR40snR40 STM1P39015 273 aaKnown RBP-1.55□□□□□ -2.66
snR40snR40 YER186CP40101 306 aa-1.55□□□□□ -2.66
snR40snR40 UTP18P40362 594 aaPredicted RBP-1.55□□□□□ -2.66
snR40snR40 BRO1P48582 844 aa-1.55□□□□□ -2.66
snR40snR40 TOF1P53840 1238 aa-1.55□□□□□ -2.66
snR40snR40 HOS1Q12214 470 aa-1.55□□□□□ -2.66
snR40snR40 CTF3Q12748 733 aa-1.55□□□□□ -2.66
snR40snR40 RPB8P20436 146 aa-1.56□□□□□ -2.66
snR40snR40 YCR022CP25620 114 aa-1.56□□□□□ -2.66
snR40snR40 FRD1P32614 470 aaKnown RBP-1.56□□□□□ -2.66
snR40snR40 SDH4P37298 181 aa-1.56□□□□□ -2.66
snR40snR40 APM3P38153 483 aa-1.56□□□□□ -2.66
snR40snR40 FRT2P39734 528 aa-1.56□□□□□ -2.66
snR40snR40 RPL37BP51402 88 aaKnown RBP-1.56□□□□□ -2.66
snR40snR40 SNP1Q00916 300 aaPredicted RBP-1.56□□□□□ -2.66
snR40snR40 NUP116Q02630 1113 aa-1.56□□□□□ -2.66
snR40snR40 NHX1Q04121 633 aa-1.56□□□□□ -2.66
snR40snR40 YDL218WQ07629 317 aa-1.56□□□□□ -2.66
snR40snR40 CFT2Q12102 859 aaPredicted RBP-1.56□□□□□ -2.66
snR40snR40 YLR049CQ12110 428 aa-1.56□□□□□ -2.66
snR40snR40 YDR061WQ12298 539 aa-1.56□□□□□ -2.66
snR40snR40 HMG2P12684 1045 aa-1.57□□□□□ -2.66
snR40snR40 ART10P18634 518 aaKnown RBP-1.57□□□□□ -2.66
snR40snR40 RPF2P36160 344 aaKnown RBP-1.57□□□□□ -2.66
snR40snR40 MRPL10P36520 322 aa-1.57□□□□□ -2.66
snR40snR40 STV1P37296 890 aa-1.57□□□□□ -2.66
snR40snR40 KTR3P38130 404 aaPredicted RBP-1.57□□□□□ -2.66
snR40snR40 STL1P39932 569 aa-1.57□□□□□ -2.66
snR40snR40 VAC8P39968 578 aa-1.57□□□□□ -2.66
snR40snR40 ALG8P40351 577 aa-1.57□□□□□ -2.66
snR40snR40 YGL082WP53155 381 aa-1.57□□□□□ -2.66
snR40snR40 YMR087WQ04299 284 aa-1.57□□□□□ -2.66
snR40snR40 TYR1P20049 452 aa-1.58□□□□□ -2.66
snR40snR40 MCM4P30665 933 aaKnown RBP-1.58□□□□□ -2.66
snR40snR40 YNK1P36010 153 aaKnown RBP-1.58□□□□□ -2.66
snR40snR40 YKR075CP36155 307 aa-1.58□□□□□ -2.66
snR40snR40 IFA38P38286 347 aa-1.58□□□□□ -2.66
snR40snR40 LNP1P38878 278 aa-1.58□□□□□ -2.66
snR40snR40 PHO90P39535 881 aa-1.58□□□□□ -2.66
snR40snR40 ELO1P39540 310 aa-1.58□□□□□ -2.66
snR40snR40 EAF5P39995 279 aa-1.58□□□□□ -2.66
snR40snR40 YFL067WP43537 175 aa-1.58□□□□□ -2.66
snR40snR40 YFR054CP43622 192 aa-1.58□□□□□ -2.66
snR40snR40 SLG1P54867 378 aa-1.58□□□□□ -2.66
snR40snR40 PRI2P20457 528 aa-1.59□□□□□ -2.66
snR40snR40 SEC62P21825 274 aa-1.59□□□□□ -2.66
snR40snR40 ECM15P35195 104 aa-1.59□□□□□ -2.66
snR40snR40 SHO1P40073 367 aa-1.59□□□□□ -2.66
snR40snR40 AXL1P40851 1208 aa-1.59□□□□□ -2.66
snR40snR40 YFL012WP43580 148 aa-1.59□□□□□ -2.66
snR40snR40 MRPS16Q02608 121 aa-1.59□□□□□ -2.66
snR40snR40 INM2Q05533 292 aa-1.59□□□□□ -2.66
snR40snR40 PDH1Q12428 516 aaKnown RBP-1.59□□□□□ -2.66
snR40snR40 SEC12P11655 471 aa-1.6□□□□□ -2.67
snR40snR40 LAC1P28496 418 aa-1.6□□□□□ -2.67
snR40snR40 STO1P34160 861 aaKnown RBP-1.6□□□□□ -2.67
snR40snR40 YER184CP39961 794 aa-1.6□□□□□ -2.67
snR40snR40 HUA1P40325 198 aa-1.6□□□□□ -2.67
snR40snR40 SEC9P40357 651 aa-1.6□□□□□ -2.67
snR40snR40 CAF16P43569 289 aa-1.6□□□□□ -2.67
Retrieved 100 of 5,963 RNA–protein pairs in 34.8 ms