RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS4	YPR173C	PER1	P25625	357 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	UGP1	P32861	499 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	SRB2	P34162	210 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	KDX1	P36005	433 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	MMS4	P38257	691 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	LYS9	P38999	446 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	PIK1	P39104	1066 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	GPB2	P39717	880 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	EAF5	P39995	279 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	NIT1	P40447	199 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	VHR1	P40522	640 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	MSS2	P40990	351 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	MRPS18	P42847	217 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	YFL012W	P43580	148 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	YJL055W	P47044	245 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	YJR124C	P47159	448 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	IMD4	P50094	524 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	YAF9	P53930	226 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	GLO2	Q05584	274 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	GMC2	Q06201	188 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	THI21	Q08975	551 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	NSL1	Q12143	216 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	YLL054C	Q12244	843 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	GPR1	Q12361	961 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	IZH4	Q99393	312 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	AI5_ALPHA	Q9ZZX1	630 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	RPS9B	P05755	195 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	CTT1	P06115	562 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	BCY1	P07278	416 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	SPE1	P08432	466 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	MSS18	P08593	268 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	ASP3-2	P0CX77	362 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	ASP3-3	P0CX78	362 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	ASP3-4	P0CX79	362 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	ASP3-1	P0CZ17	362 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	MSS116	P15424	664 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	MSM1	P22438	575 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	POL4	P25615	582 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	PTP2	P29461	750 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	HXT3	P32466	567 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	NGG1	P32494	702 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	FRE1	P32791	686 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	TYE7	P33122	291 aa	Predicted RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	RCN1	P36054	211 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	CYC2	P38909	366 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	SEO1	P39709	593 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	ECM10	P39987	644 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	AVT6	P40074	448 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	SEC28	P40509	296 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	YJL132W	P47014	750 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	ASN2	P49090	572 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	GPI1	P53306	609 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	NOP19	P53317	196 aa	Predicted RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	BUD32	P53323	261 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	ARC35	P53731	342 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	YNR065C	P53751	1116 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	YNL010W	P53981	241 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	REX2	P54964	269 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	SLD5	Q03406	294 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	YMR155W	Q03795	547 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	YMR160W	Q03823	816 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	RKM2	Q03942	479 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	HSP31	Q04432	237 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	MGR3	Q04472	501 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	CDC123	Q05791	360 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	DUS3	Q06053	668 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	TSR2	Q06672	205 aa	Known RBP	5.99	□□□□□ -1.45
VPS4	YPR173C	THI20	Q08224	551 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	MUM3	Q08750	479 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	MCD1	Q12158	566 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	HER1	Q12276	1246 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	SCM3	Q12334	223 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	YMR030W-A	Q3E760	96 aa		5.99	□□□□□ -1.45
VPS4	YPR173C	RAP1	P11938	827 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	FBA1	P14540	359 aa	Known RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	POL30	P15873	258 aa	Known RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	THR1	P17423	357 aa	Known RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	NAR1	P23503	491 aa	Known RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	VMA6	P32366	345 aa	Known RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	MAE1	P36013	669 aa	Known RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	YBR241C	P38142	488 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	RFS1	P38234	210 aa	Known RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	VID24	P38263	362 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	YHB1	P39676	399 aa	Known RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	FET4	P40988	552 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	YGR283C	P53336	341 aa	Predicted RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	SOK2	P53438	785 aa	Predicted RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	SLM2	P53955	656 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	MMT1	Q03218	510 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	PLP1	Q04004	230 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	YLR455W	Q06188	304 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	ARR1	Q06596	294 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	UBX5	Q06682	500 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	SHS1	Q07657	551 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	LOT6	Q07923	191 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	NRT1	Q08485	598 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	RKM1	Q08961	583 aa	Predicted RBP	5.98	□□□□□ -1.45
VPS4	YPR173C	ULA1	Q12059	462 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	YLR125W	Q12138	136 aa		5.98	□□□□□ -1.45
VPS4	YPR173C	ATG34	Q12292	412 aa		5.98	□□□□□ -1.45

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms