RNA–Protein interactions for RNA: YPR129W

SCD6, Transcript of Repressor of translation initiation, yeastyeast

Gene SCD6, Length 1,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCD6YPR129W BUD17P53727 317 aa3.78□□□□□ -1.8
SCD6YPR129W RVB1Q03940 463 aaKnown RBP3.78□□□□□ -1.8
SCD6YPR129W MRPL1Q04599 285 aa3.78□□□□□ -1.8
SCD6YPR129W GFD1Q04839 188 aaKnown RBP3.78□□□□□ -1.8
SCD6YPR129W ATG17Q06410 417 aa3.78□□□□□ -1.8
SCD6YPR129W MCP2Q06567 569 aa3.78□□□□□ -1.8
SCD6YPR129W MLH2Q07980 695 aa3.78□□□□□ -1.8
SCD6YPR129W BUG1Q12191 341 aa3.78□□□□□ -1.8
SCD6YPR129W HER1Q12276 1246 aa3.78□□□□□ -1.8
SCD6YPR129W CDC16P09798 840 aa3.77□□□□□ -1.81
SCD6YPR129W ISY1P21374 235 aaPredicted RBP3.77□□□□□ -1.81
SCD6YPR129W TRX1P22217 103 aaKnown RBP3.77□□□□□ -1.81
SCD6YPR129W RPC19P28000 142 aaKnown RBP3.77□□□□□ -1.81
SCD6YPR129W ITR2P30606 609 aa3.77□□□□□ -1.81
SCD6YPR129W SSH4P32343 579 aa3.77□□□□□ -1.81
SCD6YPR129W TIM23P32897 222 aa3.77□□□□□ -1.81
SCD6YPR129W TFC4P33339 1025 aa3.77□□□□□ -1.81
SCD6YPR129W UTP11P34247 250 aaPredicted RBP3.77□□□□□ -1.81
SCD6YPR129W STV1P37296 890 aa3.77□□□□□ -1.81
SCD6YPR129W PEX32P38292 413 aa3.77□□□□□ -1.81
SCD6YPR129W SEC31P38968 1273 aaKnown RBP3.77□□□□□ -1.81
SCD6YPR129W MNN1P39106 762 aa3.77□□□□□ -1.81
SCD6YPR129W RCY1P39531 840 aa3.77□□□□□ -1.81
SCD6YPR129W YEN1P40028 759 aa3.77□□□□□ -1.81
SCD6YPR129W NDE1P40215 560 aa3.77□□□□□ -1.81
SCD6YPR129W VID28P40547 921 aa3.77□□□□□ -1.81
SCD6YPR129W YFL015CP43578 164 aa3.77□□□□□ -1.81
SCD6YPR129W BNA6P43619 295 aa3.77□□□□□ -1.81
SCD6YPR129W TOM22P49334 152 aa3.77□□□□□ -1.81
SCD6YPR129W YGL242CP53066 181 aa3.77□□□□□ -1.81
SCD6YPR129W LSB1P53281 241 aa3.77□□□□□ -1.81
SCD6YPR129W RPM2Q02773 1202 aa3.77□□□□□ -1.81
SCD6YPR129W INA17Q02888 182 aa3.77□□□□□ -1.81
SCD6YPR129W PPN1Q04119 674 aa3.77□□□□□ -1.81
SCD6YPR129W ARP9Q05123 467 aa3.77□□□□□ -1.81
SCD6YPR129W YLR287CQ05881 355 aa3.77□□□□□ -1.81
SCD6YPR129W YLR407WQ06070 228 aa3.77□□□□□ -1.81
SCD6YPR129W SEC10Q06245 871 aa3.77□□□□□ -1.81
SCD6YPR129W ABP140Q08641 628 aaKnown RBP3.77□□□□□ -1.81
SCD6YPR129W YPL225WQ08971 146 aaKnown RBP3.77□□□□□ -1.81
SCD6YPR129W YOR289WQ12012 251 aaPredicted RBP3.77□□□□□ -1.81
SCD6YPR129W IES3Q12345 250 aa3.77□□□□□ -1.81
SCD6YPR129W SSN2P38931 1420 aa3.77□□□□□ -1.81
SCD6YPR129W RSR1P13856 272 aa3.76□□□□□ -1.81
SCD6YPR129W NCP1P16603 691 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W CKA2P19454 339 aa3.76□□□□□ -1.81
SCD6YPR129W TFB1P32776 642 aa3.76□□□□□ -1.81
SCD6YPR129W YME1P32795 747 aa3.76□□□□□ -1.81
SCD6YPR129W MRP4P32902 394 aa3.76□□□□□ -1.81
SCD6YPR129W PMT1P33775 817 aa3.76□□□□□ -1.81
SCD6YPR129W YPT52P36018 234 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W TYS1P36421 394 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W FZO1P38297 855 aa3.76□□□□□ -1.81
SCD6YPR129W TIF4631P39935 952 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W NOP16P40007 231 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W JEM1P40358 645 aa3.76□□□□□ -1.81
SCD6YPR129W AGE2P40529 298 aa3.76□□□□□ -1.81
SCD6YPR129W PKP1P40530 394 aa3.76□□□□□ -1.81
SCD6YPR129W ZIM17P42844 174 aa3.76□□□□□ -1.81
SCD6YPR129W FYV8P46949 817 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W YGR054WP53235 642 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W RPS15Q01855 142 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W UGO1Q03327 502 aa3.76□□□□□ -1.81
SCD6YPR129W SYF1Q04048 859 aaPredicted RBP3.76□□□□□ -1.81
SCD6YPR129W RBS1Q05672 457 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W DCS1Q06151 350 aa3.76□□□□□ -1.81
SCD6YPR129W RRP6Q12149 733 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W ATP16Q12165 160 aa3.76□□□□□ -1.81
SCD6YPR129W HTZ1Q12692 134 aaKnown RBP3.76□□□□□ -1.81
SCD6YPR129W YKL068W-AQ3E826 78 aa3.76□□□□□ -1.81
SCD6YPR129W SRB8P25648 1427 aa3.76□□□□□ -1.81
SCD6YPR129W PAB1P04147 577 aaKnown RBP RIP-Chip data3.75□□□□□ -1.81not detected
SCD6YPR129W CTT1P06115 562 aa3.75□□□□□ -1.81
SCD6YPR129W YMR085WP0CF18 432 aa3.75□□□□□ -1.81
SCD6YPR129W YER190C-BP0CX94 160 aa3.75□□□□□ -1.81
SCD6YPR129W YEL077W-AP0CX95 160 aa3.75□□□□□ -1.81
SCD6YPR129W YGR296C-BP0CX96 160 aa3.75□□□□□ -1.81
SCD6YPR129W YPL283W-BP0CX97 160 aa3.75□□□□□ -1.81
SCD6YPR129W YPR204C-AP0CX98 160 aa3.75□□□□□ -1.81
SCD6YPR129W SFL1P20134 766 aa3.75□□□□□ -1.81
SCD6YPR129W RNR3P21672 869 aaKnown RBP3.75□□□□□ -1.81
SCD6YPR129W CLB4P24871 460 aa3.75□□□□□ -1.81
SCD6YPR129W LOT5P34234 306 aa3.75□□□□□ -1.81
SCD6YPR129W SDS22P36047 338 aa3.75□□□□□ -1.81
SCD6YPR129W YBR138CP38277 524 aa3.75□□□□□ -1.81
SCD6YPR129W VMA22P38784 181 aa3.75□□□□□ -1.81
SCD6YPR129W UTP9P38882 575 aaKnown RBP3.75□□□□□ -1.81
SCD6YPR129W VPS45P38932 577 aa3.75□□□□□ -1.81
SCD6YPR129W OAF1P39720 1047 aaPredicted RBP3.75□□□□□ -1.81
SCD6YPR129W YJR061WP40355 935 aa3.75□□□□□ -1.81
SCD6YPR129W SPO22P40511 975 aa3.75□□□□□ -1.81
SCD6YPR129W YIL024CP40543 189 aa3.75□□□□□ -1.81
SCD6YPR129W EPL1P43572 832 aa3.75□□□□□ -1.81
SCD6YPR129W LOC1P43586 204 aaPredicted RBP3.75□□□□□ -1.81
SCD6YPR129W HAM1P47119 197 aaKnown RBP3.75□□□□□ -1.81
SCD6YPR129W ABM1P47146 123 aa3.75□□□□□ -1.81
SCD6YPR129W YML6P51998 286 aa3.75□□□□□ -1.81
SCD6YPR129W CGR1P53188 120 aa3.75□□□□□ -1.81
SCD6YPR129W FOL1P53848 824 aa3.75□□□□□ -1.81
SCD6YPR129W NSE5Q03718 556 aa3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms