RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C CTK2P46962 323 aa1.71□□□□□ -2.14
NIP100YPL174C IST1P53843 298 aaPredicted RBP1.71□□□□□ -2.14
NIP100YPL174C RSM28Q03430 361 aa1.71□□□□□ -2.14
NIP100YPL174C CAC2Q04199 468 aa1.71□□□□□ -2.14
NIP100YPL174C YOL057WQ08225 711 aa1.71□□□□□ -2.14
NIP100YPL174C NCP1P16603 691 aaKnown RBP1.7□□□□□ -2.14
NIP100YPL174C NPR3P38742 1146 aa1.7□□□□□ -2.14
NIP100YPL174C VPS41P38959 992 aa1.7□□□□□ -2.14
NIP100YPL174C SEC31P38968 1273 aaKnown RBP1.7□□□□□ -2.14
NIP100YPL174C ECM10P39987 644 aa1.7□□□□□ -2.14
NIP100YPL174C RIC1P40395 1056 aa1.7□□□□□ -2.14
NIP100YPL174C SMA1Q02651 245 aa1.7□□□□□ -2.14
NIP100YPL174C EKI1Q03764 534 aa1.7□□□□□ -2.14
NIP100YPL174C SCW10Q04951 389 aa1.7□□□□□ -2.14
NIP100YPL174C BRE1Q07457 700 aaKnown RBP1.7□□□□□ -2.14
NIP100YPL174C VAM6Q07468 1049 aa1.7□□□□□ -2.14
NIP100YPL174C YBR085C-AO43137 85 aa1.7□□□□□ -2.14
NIP100YPL174C PHO2P07269 559 aa1.7□□□□□ -2.14
NIP100YPL174C PET111P08468 800 aa1.7□□□□□ -2.14
NIP100YPL174C MSS18P08593 268 aa1.7□□□□□ -2.14
NIP100YPL174C KRS1P15180 591 aaKnown RBP1.7□□□□□ -2.14
NIP100YPL174C MSM1P22438 575 aa1.7□□□□□ -2.14
NIP100YPL174C SLC1P33333 303 aa1.7□□□□□ -2.14
NIP100YPL174C RIM2P38127 377 aa1.7□□□□□ -2.14
NIP100YPL174C BUR6P40096 142 aa1.7□□□□□ -2.14
NIP100YPL174C RTS2P40962 232 aa1.7□□□□□ -2.14
NIP100YPL174C YTP1P53584 459 aa1.7□□□□□ -2.14
NIP100YPL174C DUG3P53871 357 aa1.7□□□□□ -2.14
NIP100YPL174C YVH1Q02256 364 aaKnown RBP1.7□□□□□ -2.14
NIP100YPL174C RSF1Q05043 376 aa1.7□□□□□ -2.14
NIP100YPL174C PRE8P23639 250 aa1.7□□□□□ -2.14
NIP100YPL174C HOS2P53096 452 aaPredicted RBP1.7□□□□□ -2.14
NIP100YPL174C YCL049CP25577 312 aa1.69□□□□□ -2.14
NIP100YPL174C SRB5P32585 307 aa1.69□□□□□ -2.14
NIP100YPL174C AAP1P37898 856 aaKnown RBP1.69□□□□□ -2.14
NIP100YPL174C ROT2P38138 954 aa1.69□□□□□ -2.14
NIP100YPL174C DBP8P38719 431 aa1.69□□□□□ -2.14
NIP100YPL174C ACA1P39970 489 aa1.69□□□□□ -2.14
NIP100YPL174C YND1P40009 630 aa1.69□□□□□ -2.14
NIP100YPL174C SMC3P47037 1230 aa1.69□□□□□ -2.14
NIP100YPL174C VMS1Q04311 632 aaKnown RBP1.69□□□□□ -2.14
NIP100YPL174C EMI2Q04409 500 aaKnown RBP1.69□□□□□ -2.14
NIP100YPL174C EIS1Q05050 843 aaKnown RBP1.69□□□□□ -2.14
NIP100YPL174C YOR019WQ99248 730 aa1.69□□□□□ -2.14
NIP100YPL174C YFL068WP0CX99 160 aa1.69□□□□□ -2.14
NIP100YPL174C YLL066W-AP0CY00 160 aa1.69□□□□□ -2.14
NIP100YPL174C YLL067W-AP0CY01 160 aa1.69□□□□□ -2.14
NIP100YPL174C BAR1P12630 587 aa1.69□□□□□ -2.14
NIP100YPL174C PGI1P12709 554 aaKnown RBP1.69□□□□□ -2.14
NIP100YPL174C GLN3P18494 730 aa1.69□□□□□ -2.14
NIP100YPL174C ERG7P38604 731 aa1.69□□□□□ -2.14
NIP100YPL174C ASI1P54074 624 aa1.69□□□□□ -2.14
NIP100YPL174C ECM30Q06673 1274 aa1.69□□□□□ -2.14
NIP100YPL174C PSR1Q07800 427 aa1.69□□□□□ -2.14
NIP100YPL174C NBP2Q12163 236 aa1.69□□□□□ -2.14
NIP100YPL174C PCD1Q12524 340 aa1.69□□□□□ -2.14
NIP100YPL174C PCT1P13259 424 aa1.68□□□□□ -2.14
NIP100YPL174C PMS1P14242 873 aa1.68□□□□□ -2.14
NIP100YPL174C PRP16P15938 1071 aaPredicted RBP1.68□□□□□ -2.14
NIP100YPL174C EXO84P38261 753 aa1.68□□□□□ -2.14
NIP100YPL174C BUD16P39988 312 aa1.68□□□□□ -2.14
NIP100YPL174C YIR014WP40570 242 aa1.68□□□□□ -2.14
NIP100YPL174C RPS7BP48164 190 aaKnown RBP1.68□□□□□ -2.14
NIP100YPL174C DIA3P52290 468 aa1.68□□□□□ -2.14
NIP100YPL174C UBX4P54730 416 aa1.68□□□□□ -2.14
NIP100YPL174C YMR178WQ03219 274 aaKnown RBP1.68□□□□□ -2.14
NIP100YPL174C YTH1Q06102 208 aaPredicted RBP1.68□□□□□ -2.14
NIP100YPL174C APL5Q08951 932 aaKnown RBP1.68□□□□□ -2.14
NIP100YPL174C CHO1P08456 276 aa1.68□□□□□ -2.14
NIP100YPL174C BIK1P11709 440 aa1.68□□□□□ -2.14
NIP100YPL174C VMA16P23968 213 aa1.68□□□□□ -2.14
NIP100YPL174C STE50P25344 346 aa1.68□□□□□ -2.14
NIP100YPL174C RPT2P40327 437 aaKnown RBP1.68□□□□□ -2.14
NIP100YPL174C YJL070CP40361 888 aa1.68□□□□□ -2.14
NIP100YPL174C AXL1P40851 1208 aa1.68□□□□□ -2.14
NIP100YPL174C PTR3P43606 678 aa1.68□□□□□ -2.14
NIP100YPL174C ROK1P45818 564 aaPredicted RBP1.68□□□□□ -2.14
NIP100YPL174C TDA7P53882 636 aaPredicted RBP1.68□□□□□ -2.14
NIP100YPL174C FMP45Q07651 309 aa1.68□□□□□ -2.14
NIP100YPL174C PPT2Q12036 173 aa1.68□□□□□ -2.14
NIP100YPL174C DAP1Q12091 152 aa1.68□□□□□ -2.14
NIP100YPL174C YSP3P25036 478 aa1.67□□□□□ -2.14
NIP100YPL174C GID7P25569 745 aa1.67□□□□□ -2.14
NIP100YPL174C DPB11P47027 764 aaPredicted RBP1.67□□□□□ -2.14
NIP100YPL174C ARG81P05085 880 aa1.67□□□□□ -2.14
NIP100YPL174C UBC1P21734 215 aaKnown RBP1.67□□□□□ -2.14
NIP100YPL174C ERG8P24521 451 aa1.67□□□□□ -2.14
NIP100YPL174C PHD1P36093 366 aa1.67□□□□□ -2.14
NIP100YPL174C PKP1P40530 394 aa1.67□□□□□ -2.14
NIP100YPL174C SWP82P43554 623 aa1.67□□□□□ -2.14
NIP100YPL174C CSL4P53859 292 aaPredicted RBP1.67□□□□□ -2.14
NIP100YPL174C SSK1Q07084 712 aa1.67□□□□□ -2.14
NIP100YPL174C TCO89Q08921 799 aa1.67□□□□□ -2.14
NIP100YPL174C SEC62P21825 274 aa1.66□□□□□ -2.14
NIP100YPL174C ERG1P32476 496 aaKnown RBP1.66□□□□□ -2.14
NIP100YPL174C YBR139WP38109 508 aa1.66□□□□□ -2.14
NIP100YPL174C IFA38P38286 347 aa1.66□□□□□ -2.14
NIP100YPL174C YBP1P38315 674 aa1.66□□□□□ -2.14
NIP100YPL174C IME4P41833 600 aa1.66□□□□□ -2.14
NIP100YPL174C YJR008WP47085 338 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms