RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C AVT6P40074 448 aa7.42□□□□□ -1.22
RUP1YOR138C MSS2P40990 351 aa7.42□□□□□ -1.22
RUP1YOR138C ARE2P53629 642 aaKnown RBP7.42□□□□□ -1.22
RUP1YOR138C SED5Q01590 340 aa7.42□□□□□ -1.22
RUP1YOR138C RSM24Q03976 319 aa7.42□□□□□ -1.22
RUP1YOR138C GGA1Q06336 557 aa7.42□□□□□ -1.22
RUP1YOR138C ECM30Q06673 1274 aa7.42□□□□□ -1.22
RUP1YOR138C TRE2Q08693 809 aa7.42□□□□□ -1.22
RUP1YOR138C SAS5Q99314 248 aa7.42□□□□□ -1.22
RUP1YOR138C TRX2P22803 104 aaKnown RBP7.41□□□□□ -1.22
RUP1YOR138C YCK2P23292 546 aaKnown RBP7.41□□□□□ -1.22
RUP1YOR138C BUB2P26448 306 aaPredicted RBP7.41□□□□□ -1.22
RUP1YOR138C UBC8P28263 218 aa7.41□□□□□ -1.22
RUP1YOR138C MSC7P38694 644 aa7.41□□□□□ -1.22
RUP1YOR138C SEO1P39709 593 aa7.41□□□□□ -1.22
RUP1YOR138C COA1P40452 197 aa7.41□□□□□ -1.22
RUP1YOR138C IMA5P40884 581 aa7.41□□□□□ -1.22
RUP1YOR138C TY4A-JP47023 414 aa7.41□□□□□ -1.22
RUP1YOR138C IMA1P53051 589 aa7.41□□□□□ -1.22
RUP1YOR138C GTR2P53290 341 aa7.41□□□□□ -1.22
RUP1YOR138C GND2P53319 492 aa7.41□□□□□ -1.22
RUP1YOR138C ESF2P53743 316 aaKnown RBP7.41□□□□□ -1.22
RUP1YOR138C YNL134CP53912 376 aaKnown RBP7.41□□□□□ -1.22
RUP1YOR138C STP1Q00947 519 aa7.41□□□□□ -1.22
RUP1YOR138C YPL062WQ02781 134 aa7.41□□□□□ -1.22
RUP1YOR138C MUK1Q02866 612 aa7.41□□□□□ -1.22
RUP1YOR138C SRL4Q03085 281 aa7.41□□□□□ -1.22
RUP1YOR138C TFB3Q03290 321 aa7.41□□□□□ -1.22
RUP1YOR138C HRD3Q05787 833 aa7.41□□□□□ -1.22
RUP1YOR138C GYP1Q08484 637 aa7.41□□□□□ -1.22
RUP1YOR138C AFI1Q99222 893 aa7.41□□□□□ -1.22
RUP1YOR138C SUC2P00724 532 aa7.4□□□□□ -1.22
RUP1YOR138C ARG3P05150 338 aa7.4□□□□□ -1.22
RUP1YOR138C TPK1P06244 397 aa7.4□□□□□ -1.22
RUP1YOR138C TEC1P18412 486 aa7.4□□□□□ -1.22
RUP1YOR138C ERG6P25087 383 aaKnown RBP7.4□□□□□ -1.22
RUP1YOR138C POL4P25615 582 aa7.4□□□□□ -1.22
RUP1YOR138C PAH1P32567 862 aa7.4□□□□□ -1.22
RUP1YOR138C HBS1P32769 611 aaKnown RBP7.4□□□□□ -1.22
RUP1YOR138C PTM1P32857 523 aa7.4□□□□□ -1.22
RUP1YOR138C WHI3P34761 661 aaKnown RBP7.4□□□□□ -1.22
RUP1YOR138C MAE1P36013 669 aaKnown RBP7.4□□□□□ -1.22
RUP1YOR138C GPT2P36148 743 aa7.4□□□□□ -1.22
RUP1YOR138C URA8P38627 578 aaPredicted RBP7.4□□□□□ -1.22
RUP1YOR138C FAD1P38913 306 aa7.4□□□□□ -1.22
RUP1YOR138C GIP4P39732 760 aa7.4□□□□□ -1.22
RUP1YOR138C YRB1P41920 201 aaKnown RBP7.4□□□□□ -1.22
RUP1YOR138C SWP82P43554 623 aa7.4□□□□□ -1.22
RUP1YOR138C DMA2P53924 522 aa7.4□□□□□ -1.22
RUP1YOR138C YNL095CP53932 642 aa7.4□□□□□ -1.22
RUP1YOR138C ECM9Q02202 377 aa7.4□□□□□ -1.22
RUP1YOR138C MMT1Q03218 510 aa7.4□□□□□ -1.22
RUP1YOR138C FMP42Q04991 504 aa7.4□□□□□ -1.22
RUP1YOR138C APC5Q08683 685 aa7.4□□□□□ -1.22
RUP1YOR138C SAM3Q08986 587 aa7.4□□□□□ -1.22
RUP1YOR138C YOR022CQ12204 715 aa7.4□□□□□ -1.22
RUP1YOR138C PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
RUP1YOR138C THP2O13539 261 aaKnown RBP7.4□□□□□ -1.23
RUP1YOR138C HEM2P05373 342 aa7.4□□□□□ -1.23
RUP1YOR138C UGA1P17649 471 aa7.4□□□□□ -1.23
RUP1YOR138C RSA4P25382 515 aaKnown RBP7.4□□□□□ -1.23
RUP1YOR138C RAD16P31244 790 aa7.4□□□□□ -1.23
RUP1YOR138C TIM23P32897 222 aa7.4□□□□□ -1.23
RUP1YOR138C CSE2P33308 149 aa7.4□□□□□ -1.23
RUP1YOR138C NTR2P36118 322 aaPredicted RBP7.4□□□□□ -1.23
RUP1YOR138C DRE2P36152 348 aa7.4□□□□□ -1.23
RUP1YOR138C SRL3P36167 246 aa7.4□□□□□ -1.23
RUP1YOR138C SKG1P36169 355 aa7.4□□□□□ -1.23
RUP1YOR138C SWD1P39706 426 aa7.4□□□□□ -1.23
RUP1YOR138C EDC3P39998 551 aaKnown RBP7.4□□□□□ -1.23
RUP1YOR138C AGP3P43548 558 aa7.4□□□□□ -1.23
RUP1YOR138C RTT101P47050 842 aa7.4□□□□□ -1.23
RUP1YOR138C EFM5P53200 248 aaKnown RBP7.4□□□□□ -1.23
RUP1YOR138C REG1Q00816 1014 aa7.4□□□□□ -1.23
RUP1YOR138C RIF2Q06208 395 aa7.4□□□□□ -1.23
RUP1YOR138C TSR2Q06672 205 aaKnown RBP7.4□□□□□ -1.23
RUP1YOR138C YPL191CQ08930 360 aa7.4□□□□□ -1.23
RUP1YOR138C SEC53P07283 254 aaKnown RBP7.39□□□□□ -1.23
RUP1YOR138C RAP1P11938 827 aa7.39□□□□□ -1.23
RUP1YOR138C KSS1P14681 368 aa7.39□□□□□ -1.23
RUP1YOR138C FAR1P21268 830 aa7.39□□□□□ -1.23
RUP1YOR138C DBR1P24309 405 aaKnown RBP7.39□□□□□ -1.23
RUP1YOR138C SPC34P36131 295 aa7.39□□□□□ -1.23
RUP1YOR138C RFS1P38234 210 aaKnown RBP7.39□□□□□ -1.23
RUP1YOR138C YEN1P40028 759 aa7.39□□□□□ -1.23
RUP1YOR138C THO1P40040 218 aaKnown RBP7.39□□□□□ -1.23
RUP1YOR138C YJL070CP40361 888 aa7.39□□□□□ -1.23
RUP1YOR138C IRC5P43610 853 aa7.39□□□□□ -1.23
RUP1YOR138C YGL176CP46945 554 aa7.39□□□□□ -1.23
RUP1YOR138C MPS3P47069 682 aa7.39□□□□□ -1.23
RUP1YOR138C KEL2P50090 882 aa7.39□□□□□ -1.23
RUP1YOR138C SPC98P53540 846 aa7.39□□□□□ -1.23
RUP1YOR138C CDC14Q00684 551 aa7.39□□□□□ -1.23
RUP1YOR138C YMR099CQ03161 297 aaKnown RBP7.39□□□□□ -1.23
RUP1YOR138C SPO71Q03868 1245 aa7.39□□□□□ -1.23
RUP1YOR138C GPM2Q12008 311 aa7.39□□□□□ -1.23
RUP1YOR138C YLR049CQ12110 428 aa7.39□□□□□ -1.23
RUP1YOR138C YLL054CQ12244 843 aa7.39□□□□□ -1.23
RUP1YOR138C COS2P0CX12 379 aa7.39□□□□□ -1.23
RUP1YOR138C COS3P0CX13 379 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms