RNA–Protein interactions for RNA: YMR118C

SHH3, Transcript of Putative mitochondrial inner membrane protein of unknown function, yeastyeast

Gene SHH3, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH3YMR118C VAM6Q07468 1049 aa3.5□□□□□ -1.85
SHH3YMR118C ENT4Q07872 247 aa3.5□□□□□ -1.85
SHH3YMR118C LOT6Q07923 191 aa3.5□□□□□ -1.85
SHH3YMR118C NOP12Q08208 459 aaKnown RBP3.5□□□□□ -1.85
SHH3YMR118C AIM39Q08223 395 aa3.5□□□□□ -1.85
SHH3YMR118C IES4Q08561 116 aa3.5□□□□□ -1.85
SHH3YMR118C MUM3Q08750 479 aa3.5□□□□□ -1.85
SHH3YMR118C OSW2Q12202 724 aa3.5□□□□□ -1.85
SHH3YMR118C EMP46Q12396 444 aa3.5□□□□□ -1.85
SHH3YMR118C MYO1P08964 1928 aa3.49□□□□□ -1.85
SHH3YMR118C TY1B-AO13527 1196 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C MF(ALPHA)1P01149 165 aa3.49□□□□□ -1.85
SHH3YMR118C MSS18P08593 268 aa3.49□□□□□ -1.85
SHH3YMR118C RAD18P10862 487 aa3.49□□□□□ -1.85
SHH3YMR118C PUT4P15380 627 aa3.49□□□□□ -1.85
SHH3YMR118C PMA2P19657 947 aa3.49□□□□□ -1.85
SHH3YMR118C SEC15P22224 910 aa3.49□□□□□ -1.85
SHH3YMR118C AMD2P22580 549 aa3.49□□□□□ -1.85
SHH3YMR118C VPS3P23643 1011 aa3.49□□□□□ -1.85
SHH3YMR118C TSR4P25040 408 aa3.49□□□□□ -1.85
SHH3YMR118C KIN82P25341 720 aa3.49□□□□□ -1.85
SHH3YMR118C CSM1P25651 190 aa3.49□□□□□ -1.85
SHH3YMR118C HRR25P29295 494 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C VMA6P32366 345 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C CYS4P32582 507 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C MRP4P32902 394 aa3.49□□□□□ -1.85
SHH3YMR118C TYE7P33122 291 aaPredicted RBP3.49□□□□□ -1.85
SHH3YMR118C PEX6P33760 1030 aa3.49□□□□□ -1.85
SHH3YMR118C PEX5P35056 612 aa3.49□□□□□ -1.85
SHH3YMR118C YPK3P38070 525 aa3.49□□□□□ -1.85
SHH3YMR118C RFS1P38234 210 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C ATG12P38316 186 aa3.49□□□□□ -1.85
SHH3YMR118C TDP1P38319 544 aa3.49□□□□□ -1.85
SHH3YMR118C ARN1P38731 627 aa3.49□□□□□ -1.85
SHH3YMR118C OTU2P38747 307 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C SSZ1P38788 538 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C MEF2P39677 819 aa3.49□□□□□ -1.85
SHH3YMR118C SEO1P39709 593 aa3.49□□□□□ -1.85
SHH3YMR118C AVT6P40074 448 aa3.49□□□□□ -1.85
SHH3YMR118C MGS1P40151 587 aa3.49□□□□□ -1.85
SHH3YMR118C YRB2P40517 327 aa3.49□□□□□ -1.85
SHH3YMR118C VHR1P40522 640 aa3.49□□□□□ -1.85
SHH3YMR118C AGP3P43548 558 aa3.49□□□□□ -1.85
SHH3YMR118C SCD6P45978 349 aaKnown RBP RIP-Chip data3.49□□□□□ -1.85not detected
SHH3YMR118C YJR054WP47114 497 aa3.49□□□□□ -1.85
SHH3YMR118C LYS4P49367 693 aaPredicted RBP3.49□□□□□ -1.85
SHH3YMR118C AZR1P50080 613 aa3.49□□□□□ -1.85
SHH3YMR118C PSP1P50896 841 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C RMR1P53060 241 aa3.49□□□□□ -1.85
SHH3YMR118C CUL3P53202 744 aa3.49□□□□□ -1.85
SHH3YMR118C GPI1P53306 609 aa3.49□□□□□ -1.85
SHH3YMR118C YPR003CP53394 754 aa3.49□□□□□ -1.85
SHH3YMR118C REX2P54964 269 aaKnown RBP3.49□□□□□ -1.85
SHH3YMR118C RPL34AP87262 121 aaPredicted RBP3.49□□□□□ -1.85
SHH3YMR118C SWP1Q02795 286 aa3.49□□□□□ -1.85
SHH3YMR118C FMP30Q02883 468 aa3.49□□□□□ -1.85
SHH3YMR118C RCF1Q03713 159 aa3.49□□□□□ -1.85
SHH3YMR118C YMR160WQ03823 816 aa3.49□□□□□ -1.85
SHH3YMR118C URC2Q04411 772 aa3.49□□□□□ -1.85
SHH3YMR118C HSP31Q04432 237 aa3.49□□□□□ -1.85
SHH3YMR118C SSQ1Q05931 657 aaPredicted RBP3.49□□□□□ -1.85
SHH3YMR118C SPH1Q06160 661 aa3.49□□□□□ -1.85
SHH3YMR118C GUD1Q07729 489 aa3.49□□□□□ -1.85
SHH3YMR118C PSR1Q07800 427 aa3.49□□□□□ -1.85
SHH3YMR118C RSB1Q08417 382 aa3.49□□□□□ -1.85
SHH3YMR118C SGO1Q08490 590 aa3.49□□□□□ -1.85
SHH3YMR118C ULA1Q12059 462 aa3.49□□□□□ -1.85
SHH3YMR118C NSL1Q12143 216 aa3.49□□□□□ -1.85
SHH3YMR118C RPN13O13563 156 aa3.48□□□□□ -1.85
SHH3YMR118C ATP6P00854 259 aa3.48□□□□□ -1.85
SHH3YMR118C GAL10P04397 699 aa3.48□□□□□ -1.85
SHH3YMR118C RPL6BP05739 176 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C TPK2P06245 380 aa3.48□□□□□ -1.85
SHH3YMR118C RHO1P06780 209 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C BCY1P07278 416 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C SPE1P08432 466 aa3.48□□□□□ -1.85
SHH3YMR118C ERR1P0CX10 437 aa3.48□□□□□ -1.85
SHH3YMR118C ERR2P0CX11 437 aa3.48□□□□□ -1.85
SHH3YMR118C RAP1P11938 827 aa3.48□□□□□ -1.85
SHH3YMR118C YPK1P12688 680 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C NMT1P14743 455 aa3.48□□□□□ -1.85
SHH3YMR118C HSP60P19882 572 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C RVS161P25343 265 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C CTR86P25355 563 aa3.48□□□□□ -1.85
SHH3YMR118C GID7P25569 745 aa3.48□□□□□ -1.85
SHH3YMR118C YCL068CP25593 260 aa3.48□□□□□ -1.85
SHH3YMR118C POL4P25615 582 aa3.48□□□□□ -1.85
SHH3YMR118C YCR016WP25617 290 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C HXT3P32466 567 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C HBS1P32769 611 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C SRB2P34162 210 aa3.48□□□□□ -1.85
SHH3YMR118C OCT1P35999 772 aa3.48□□□□□ -1.85
SHH3YMR118C YMC2P38087 329 aa3.48□□□□□ -1.85
SHH3YMR118C YBR139WP38109 508 aa3.48□□□□□ -1.85
SHH3YMR118C YHR112CP38716 378 aa3.48□□□□□ -1.85
SHH3YMR118C CYC2P38909 366 aa3.48□□□□□ -1.85
SHH3YMR118C ERP2P39704 215 aa3.48□□□□□ -1.85
SHH3YMR118C ECM10P39987 644 aa3.48□□□□□ -1.85
SHH3YMR118C THO1P40040 218 aaKnown RBP3.48□□□□□ -1.85
SHH3YMR118C MND2P40577 368 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms