RNA–Protein interactions for RNA: YMR048W

CSM3, Transcript of Replication fork associated factor, yeast

Gene CSM3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSM3	YMR048W	IZH1	Q03419	316 aa		4.22	□□□□□ -1.73
CSM3	YMR048W	ARP9	Q05123	467 aa		4.22	□□□□□ -1.73
CSM3	YMR048W	FRE3	Q08905	711 aa		4.22	□□□□□ -1.73
CSM3	YMR048W	APA1	P16550	321 aa	Known RBP	4.21	□□□□□ -1.74
CSM3	YMR048W	RIT1	P23796	513 aa		4.21	□□□□□ -1.74
CSM3	YMR048W	PWP2	P25635	923 aa	Known RBP	4.21	□□□□□ -1.74
CSM3	YMR048W	BZZ1	P38822	633 aa		4.21	□□□□□ -1.74
CSM3	YMR048W	BUD16	P39988	312 aa		4.21	□□□□□ -1.74
CSM3	YMR048W	ASG1	P40467	964 aa		4.21	□□□□□ -1.74
CSM3	YMR048W	DJP1	P40564	432 aa		4.21	□□□□□ -1.74
CSM3	YMR048W	ATG23	Q06671	453 aa		4.21	□□□□□ -1.74
CSM3	YMR048W	IWR1	Q07532	353 aa	Predicted RBP	4.21	□□□□□ -1.74
CSM3	YMR048W	GCN2	P15442	1659 aa		4.21	□□□□□ -1.74
CSM3	YMR048W	SEC7	P11075	2009 aa	Known RBP	4.21	□□□□□ -1.74
CSM3	YMR048W	SSM4	P40318	1319 aa		4.21	□□□□□ -1.74
CSM3	YMR048W	SUI3	P09064	285 aa	Known RBP	4.2	□□□□□ -1.74
CSM3	YMR048W	MSM1	P22438	575 aa		4.2	□□□□□ -1.74
CSM3	YMR048W	VPS24	P36095	224 aa	Known RBP	4.2	□□□□□ -1.74
CSM3	YMR048W	FMP46	P36141	133 aa	Known RBP	4.2	□□□□□ -1.74
CSM3	YMR048W	MRPL36	P36531	177 aa		4.2	□□□□□ -1.74
CSM3	YMR048W	SKP2	P42843	763 aa		4.2	□□□□□ -1.74
CSM3	YMR048W	HOS2	P53096	452 aa	Predicted RBP	4.2	□□□□□ -1.74
CSM3	YMR048W	MTG1	Q03151	367 aa	Predicted RBP	4.2	□□□□□ -1.74
CSM3	YMR048W	BLS1	Q06071	122 aa		4.2	□□□□□ -1.74
CSM3	YMR048W	TAH18	Q12181	623 aa		4.2	□□□□□ -1.74
CSM3	YMR048W	PDR5	P33302	1511 aa	Known RBP	4.2	□□□□□ -1.74
CSM3	YMR048W	ADE3	P07245	946 aa	Known RBP	4.19	□□□□□ -1.74
CSM3	YMR048W	GPA1	P08539	472 aa		4.19	□□□□□ -1.74
CSM3	YMR048W	BIK1	P11709	440 aa		4.19	□□□□□ -1.74
CSM3	YMR048W	CLB4	P24871	460 aa		4.19	□□□□□ -1.74
CSM3	YMR048W	SWI4	P25302	1093 aa	Known RBP	4.19	□□□□□ -1.74
CSM3	YMR048W	DBF20	P32328	564 aa		4.19	□□□□□ -1.74
CSM3	YMR048W	GCD7	P32502	381 aa	Predicted RBP	4.19	□□□□□ -1.74
CSM3	YMR048W	SPC72	P39723	622 aa		4.19	□□□□□ -1.74
CSM3	YMR048W	CPR6	P53691	371 aa	Known RBP	4.19	□□□□□ -1.74
CSM3	YMR048W	YMR254C	Q04838	102 aa		4.19	□□□□□ -1.74
CSM3	YMR048W	NUC1	P08466	329 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	PET122	P10355	254 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	FUI1	P38196	639 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	PSF2	P40359	213 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	SAP185	P40856	1058 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	PSP1	P50896	841 aa	Known RBP	4.18	□□□□□ -1.74
CSM3	YMR048W	EIS1	Q05050	843 aa	Known RBP	4.18	□□□□□ -1.74
CSM3	YMR048W	RTT103	Q05543	409 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	YLR455W	Q06188	304 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	APL5	Q08951	932 aa	Known RBP	4.18	□□□□□ -1.74
CSM3	YMR048W	YLR049C	Q12110	428 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	SUL2	Q12325	893 aa		4.18	□□□□□ -1.74
CSM3	YMR048W	PCT1	P13259	424 aa		4.17	□□□□□ -1.74
CSM3	YMR048W	CDC23	P16522	626 aa		4.17	□□□□□ -1.74
CSM3	YMR048W	DPB3	P27344	201 aa		4.17	□□□□□ -1.74
CSM3	YMR048W	PUG1	P40100	303 aa		4.17	□□□□□ -1.74
CSM3	YMR048W	IMA1	P53051	589 aa		4.17	□□□□□ -1.74
CSM3	YMR048W	YNL181W	P53878	407 aa		4.17	□□□□□ -1.74
CSM3	YMR048W	ESBP6	P53918	673 aa		4.17	□□□□□ -1.74
CSM3	YMR048W	ADE16	P54113	591 aa	Known RBP	4.17	□□□□□ -1.74
CSM3	YMR048W	TRX2	P22803	104 aa	Known RBP	4.16	□□□□□ -1.74
CSM3	YMR048W	EFM2	P38347	419 aa		4.16	□□□□□ -1.74
CSM3	YMR048W	ERR3	P42222	437 aa		4.16	□□□□□ -1.74
CSM3	YMR048W	IML2	P47031	731 aa		4.16	□□□□□ -1.74
CSM3	YMR048W	YGR021W	P53212	290 aa		4.16	□□□□□ -1.74
CSM3	YMR048W	TAM41	P53230	385 aa		4.16	□□□□□ -1.74
CSM3	YMR048W	DCP2	P53550	970 aa	Known RBP	4.16	□□□□□ -1.74
CSM3	YMR048W	MRPL13	Q02204	264 aa		4.16	□□□□□ -1.74
CSM3	YMR048W	PSR2	Q07949	397 aa		4.16	□□□□□ -1.74
CSM3	YMR048W	YMR230W-A	Q3E7B5	62 aa		4.16	□□□□□ -1.74
CSM3	YMR048W	RAV1	P47104	1357 aa		4.15	□□□□□ -1.74
CSM3	YMR048W	CFT1	Q06632	1357 aa	Known RBP	4.15	□□□□□ -1.74
CSM3	YMR048W	YOR093C	Q12275	1648 aa		4.15	□□□□□ -1.74
CSM3	YMR048W	CBP1	P07252	654 aa		4.15	□□□□□ -1.75
CSM3	YMR048W	LRE1	P25579	583 aa	Known RBP	4.15	□□□□□ -1.75
CSM3	YMR048W	RAD16	P31244	790 aa		4.15	□□□□□ -1.75
CSM3	YMR048W	ARP2	P32381	391 aa	Known RBP	4.15	□□□□□ -1.75
CSM3	YMR048W	LEU5	P38702	357 aa		4.15	□□□□□ -1.75
CSM3	YMR048W	RPT2	P40327	437 aa	Known RBP	4.15	□□□□□ -1.75
CSM3	YMR048W	SMK1	P41808	388 aa		4.15	□□□□□ -1.75
CSM3	YMR048W	ZAP1	P47043	880 aa		4.15	□□□□□ -1.75
CSM3	YMR048W	UTP21	Q06078	939 aa	Predicted RBP	4.15	□□□□□ -1.75
CSM3	YMR048W	NUP188	P52593	1655 aa	Known RBP	4.15	□□□□□ -1.75
CSM3	YMR048W	IML1	P47170	1584 aa		4.14	□□□□□ -1.75
CSM3	YMR048W	YER145C-A	A0A023PYF4	145 aa		4.14	□□□□□ -1.75
CSM3	YMR048W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
CSM3	YMR048W	ESL2	P36168	1195 aa		4.14	□□□□□ -1.75
CSM3	YMR048W	FSH1	P38777	243 aa	Known RBP	4.14	□□□□□ -1.75
CSM3	YMR048W	IES5	P40060	125 aa		4.14	□□□□□ -1.75
CSM3	YMR048W	CUL3	P53202	744 aa		4.14	□□□□□ -1.75
CSM3	YMR048W	MAK10	Q02197	733 aa		4.14	□□□□□ -1.75
CSM3	YMR048W	TRS130	Q03660	1102 aa		4.14	□□□□□ -1.75
CSM3	YMR048W	HNM1	P19807	563 aa		4.13	□□□□□ -1.75
CSM3	YMR048W	YSP3	P25036	478 aa		4.13	□□□□□ -1.75
CSM3	YMR048W	RFA2	P26754	273 aa	Known RBP	4.13	□□□□□ -1.75
CSM3	YMR048W	NUP120	P35729	1037 aa		4.13	□□□□□ -1.75
CSM3	YMR048W	YBR138C	P38277	524 aa		4.13	□□□□□ -1.75
CSM3	YMR048W	UME6	P39001	836 aa		4.13	□□□□□ -1.75
CSM3	YMR048W	MCP2	Q06567	569 aa		4.13	□□□□□ -1.75
CSM3	YMR048W	YML003W	P0CF16	290 aa		4.12	□□□□□ -1.75
CSM3	YMR048W	NCP1	P16603	691 aa	Known RBP	4.12	□□□□□ -1.75
CSM3	YMR048W	STE50	P25344	346 aa		4.12	□□□□□ -1.75
CSM3	YMR048W	YCL049C	P25577	312 aa		4.12	□□□□□ -1.75
CSM3	YMR048W	RAD24	P32641	659 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms