RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	OCT1	P35999	772 aa		4.62	□□□□□ -1.67
NIT3	YLR351C	TPA1	P40032	644 aa	Known RBP	4.62	□□□□□ -1.67
NIT3	YLR351C	FMP10	P40098	244 aa		4.62	□□□□□ -1.67
NIT3	YLR351C	TMA108	P40462	946 aa		4.62	□□□□□ -1.67
NIT3	YLR351C	XBP1	P40489	647 aa		4.62	□□□□□ -1.67
NIT3	YLR351C	PIL1	P53252	339 aa	Known RBP	4.62	□□□□□ -1.67
NIT3	YLR351C	PDR8	Q06149	701 aa		4.62	□□□□□ -1.67
NIT3	YLR351C	GPN2	Q08726	347 aa	Predicted RBP	4.62	□□□□□ -1.67
NIT3	YLR351C	GET3	Q12154	354 aa	Known RBP	4.62	□□□□□ -1.67
NIT3	YLR351C	YMR085W	P0CF18	432 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	CDC24	P11433	854 aa	Predicted RBP	4.61	□□□□□ -1.67
NIT3	YLR351C	PRE8	P23639	250 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	YCR006C	P25350	157 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	KTR3	P38130	404 aa	Predicted RBP	4.61	□□□□□ -1.67
NIT3	YLR351C	YEL068C	P39977	110 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	ECM10	P39987	644 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	BNA3	P47039	444 aa	Known RBP	4.61	□□□□□ -1.67
NIT3	YLR351C	IST1	P53843	298 aa	Predicted RBP	4.61	□□□□□ -1.67
NIT3	YLR351C	VPS72	Q03388	795 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	YLR455W	Q06188	304 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	YLR049C	Q12110	428 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	SPP41	P38904	1435 aa		4.61	□□□□□ -1.67
NIT3	YLR351C	PET111	P08468	800 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	CDC16	P09798	840 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	MUD2	P36084	527 aa	Known RBP	4.6	□□□□□ -1.67
NIT3	YLR351C	SEC24	P40482	926 aa	Known RBP	4.6	□□□□□ -1.67
NIT3	YLR351C	PSA1	P41940	361 aa	Known RBP	4.6	□□□□□ -1.67
NIT3	YLR351C	CTK2	P46962	323 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	INN1	P53901	409 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	INA17	Q02888	182 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	TMA64	Q04600	565 aa	Known RBP	4.6	□□□□□ -1.67
NIT3	YLR351C	PIG1	Q06216	648 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	SKG3	Q06315	1026 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	MCH4	Q08268	501 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	STH1	P32597	1359 aa		4.6	□□□□□ -1.67
NIT3	YLR351C	HXK2	P04807	486 aa	Known RBP	4.59	□□□□□ -1.67
NIT3	YLR351C	YRF1-1	P0CX20	1796 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	YRF1-5	P0CX21	1796 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	YRF1-8	P0CX22	1796 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	PTP1	P25044	335 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	YPT53	P36019	220 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	ESL2	P36168	1195 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	NOP16	P40007	231 aa	Known RBP	4.59	□□□□□ -1.67
NIT3	YLR351C	CFD1	P40558	293 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	COP1	P53622	1201 aa	Known RBP	4.59	□□□□□ -1.67
NIT3	YLR351C	YML122C	Q03207	126 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	TRM732	Q03496	1420 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	ENT4	Q07872	247 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	PFA4	Q12006	378 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	CRC1	Q12289	327 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	ENT1	Q12518	454 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	YOR111W	Q99210	232 aa		4.59	□□□□□ -1.67
NIT3	YLR351C	MYO4	P32492	1471 aa		4.58	□□□□□ -1.68
NIT3	YLR351C	TSC11	P40061	1430 aa		4.58	□□□□□ -1.68
NIT3	YLR351C	PAH1	P32567	862 aa		4.58	□□□□□ -1.68
NIT3	YLR351C	YNG2	P38806	282 aa	Known RBP	4.58	□□□□□ -1.68
NIT3	YLR351C	NET1	P47035	1189 aa		4.58	□□□□□ -1.68
NIT3	YLR351C	UBP8	P50102	471 aa		4.58	□□□□□ -1.68
NIT3	YLR351C	YSA1	Q01976	231 aa		4.58	□□□□□ -1.68
NIT3	YLR351C	RAD30	Q04049	632 aa		4.58	□□□□□ -1.68
NIT3	YLR351C	VIP1	Q06685	1146 aa	Known RBP	4.58	□□□□□ -1.68
NIT3	YLR351C	SEM1	O94742	89 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	GPA1	P08539	472 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	RPL19A	P0CX82	189 aa	Known RBP	4.57	□□□□□ -1.68
NIT3	YLR351C	RPL19B	P0CX83	189 aa	Predicted RBP	4.57	□□□□□ -1.68
NIT3	YLR351C	MDM10	P18409	493 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	YAP1	P19880	650 aa	Known RBP	4.57	□□□□□ -1.68
NIT3	YLR351C	CNA1	P23287	553 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	PKP1	P40530	394 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	YIL024C	P40543	189 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	LYS14	P40971	790 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	DPB11	P47027	764 aa	Predicted RBP	4.57	□□□□□ -1.68
NIT3	YLR351C	YGL036W	P53185	909 aa	Predicted RBP	4.57	□□□□□ -1.68
NIT3	YLR351C	EAF7	P53911	425 aa	Known RBP	4.57	□□□□□ -1.68
NIT3	YLR351C	VTC3	Q02725	835 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	PFA5	Q03289	374 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	YKU80	Q04437	629 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	SWF1	Q04629	336 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	RIX7	Q07844	837 aa	Known RBP	4.57	□□□□□ -1.68
NIT3	YLR351C	TCO89	Q08921	799 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	RRI1	Q12468	440 aa		4.57	□□□□□ -1.68
NIT3	YLR351C	LTE1	P07866	1435 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	YER145C-A	A0A023PYF4	145 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	GAL4	P04386	881 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	CHO1	P08456	276 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	SAN1	P22470	610 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	TKL1	P23254	680 aa	Known RBP	4.56	□□□□□ -1.68
NIT3	YLR351C	IMP2'	P32351	346 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	PDB1	P32473	366 aa	Known RBP	4.56	□□□□□ -1.68
NIT3	YLR351C	YBL029W	P38201	376 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	TOM71	P38825	639 aa	Known RBP	4.56	□□□□□ -1.68
NIT3	YLR351C	RTS1	P38903	757 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	VPS41	P38959	992 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	YFR020W	P43600	232 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	SMC3	P47037	1230 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	PSR1	Q07800	427 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	HUA2	Q12134	243 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	RRI2	Q12348	645 aa		4.56	□□□□□ -1.68
NIT3	YLR351C	SNT2	P53127	1403 aa		4.55	□□□□□ -1.68
NIT3	YLR351C	RAP1	P11938	827 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms