RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W YPT6Q99260 215 aa9.97□□□□□ -0.81
SHH4YLR164W YOR338WQ99326 363 aa9.97□□□□□ -0.81
SHH4YLR164W FRT1Q99332 602 aa9.97□□□□□ -0.81
SHH4YLR164W COX6P00427 148 aa9.96□□□□□ -0.82
SHH4YLR164W DEP1P31385 405 aa9.96□□□□□ -0.82
SHH4YLR164W HEK2P38199 381 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
SHH4YLR164W STN1P38960 494 aa9.96□□□□□ -0.82
SHH4YLR164W SEC28P40509 296 aaKnown RBP9.96□□□□□ -0.82
SHH4YLR164W PRM2P40534 656 aa9.96□□□□□ -0.82
SHH4YLR164W RSM7P47150 247 aa9.96□□□□□ -0.82
SHH4YLR164W TIS11P47977 285 aa9.96□□□□□ -0.82
SHH4YLR164W BOL2P53082 120 aa9.96□□□□□ -0.82
SHH4YLR164W NMA2P53204 395 aa9.96□□□□□ -0.82
SHH4YLR164W IST1P53843 298 aaPredicted RBP9.96□□□□□ -0.82
SHH4YLR164W IMP4P53941 290 aaKnown RBP9.96□□□□□ -0.82
SHH4YLR164W TVP15Q03860 143 aa9.96□□□□□ -0.82
SHH4YLR164W TRM12Q04235 462 aa9.96□□□□□ -0.82
SHH4YLR164W MDY2Q12285 212 aa9.96□□□□□ -0.82
SHH4YLR164W ABF1P14164 731 aa9.95□□□□□ -0.82
SHH4YLR164W PRP4P20053 465 aaKnown RBP9.95□□□□□ -0.82
SHH4YLR164W NPP1P25353 742 aa9.95□□□□□ -0.82
SHH4YLR164W RPC19P28000 142 aaKnown RBP9.95□□□□□ -0.82
SHH4YLR164W PMT1P33775 817 aa9.95□□□□□ -0.82
SHH4YLR164W MAK5P38112 773 aaPredicted RBP9.95□□□□□ -0.82
SHH4YLR164W ERP5P38819 212 aa9.95□□□□□ -0.82
SHH4YLR164W SEC31P38968 1273 aaKnown RBP9.95□□□□□ -0.82
SHH4YLR164W OSW5P40219 148 aa9.95□□□□□ -0.82
SHH4YLR164W AXL1P40851 1208 aa9.95□□□□□ -0.82
SHH4YLR164W VMA13P41807 478 aaKnown RBP9.95□□□□□ -0.82
SHH4YLR164W ARH1P48360 493 aa9.95□□□□□ -0.82
SHH4YLR164W COG7P53195 279 aa9.95□□□□□ -0.82
SHH4YLR164W YNL058CP53947 316 aa9.95□□□□□ -0.82
SHH4YLR164W PEX13P80667 386 aa9.95□□□□□ -0.82
SHH4YLR164W YML119WQ03208 357 aa9.95□□□□□ -0.82
SHH4YLR164W GOT1Q03554 138 aa9.95□□□□□ -0.82
SHH4YLR164W TAF12Q03761 539 aa9.95□□□□□ -0.82
SHH4YLR164W HPT1Q04178 221 aaKnown RBP9.95□□□□□ -0.82
SHH4YLR164W BLS1Q06071 122 aa9.95□□□□□ -0.82
SHH4YLR164W NUT2Q06213 157 aa9.95□□□□□ -0.82
SHH4YLR164W MPD2Q99316 277 aa9.95□□□□□ -0.82
SHH4YLR164W PHO5P00635 467 aa9.94□□□□□ -0.82
SHH4YLR164W ARG1P22768 420 aa9.94□□□□□ -0.82
SHH4YLR164W THI80P35202 319 aa9.94□□□□□ -0.82
SHH4YLR164W DCW1P36091 449 aa9.94□□□□□ -0.82
SHH4YLR164W IRR1P40541 1150 aa9.94□□□□□ -0.82
SHH4YLR164W GAT1P43574 510 aa9.94□□□□□ -0.82
SHH4YLR164W UBP6P43593 499 aaKnown RBP9.94□□□□□ -0.82
SHH4YLR164W ATH1P48016 1211 aa9.94□□□□□ -0.82
SHH4YLR164W OSH6Q02201 448 aa9.94□□□□□ -0.82
SHH4YLR164W NSE1Q07913 336 aa9.94□□□□□ -0.82
SHH4YLR164W SMF3Q12078 473 aaPredicted RBP9.94□□□□□ -0.82
SHH4YLR164W RHO2P06781 192 aa9.93□□□□□ -0.82
SHH4YLR164W ART10P18634 518 aaKnown RBP9.93□□□□□ -0.82
SHH4YLR164W UBA1P22515 1024 aaKnown RBP9.93□□□□□ -0.82
SHH4YLR164W SNT1P25357 1226 aa9.93□□□□□ -0.82
SHH4YLR164W MF(ALPHA)2P32435 120 aa9.93□□□□□ -0.82
SHH4YLR164W EAP1P36041 632 aaKnown RBP9.93□□□□□ -0.82
SHH4YLR164W RFC3P38629 340 aa9.93□□□□□ -0.82
SHH4YLR164W ARP1P38696 384 aa9.93□□□□□ -0.82
SHH4YLR164W EFM1P38732 585 aa9.93□□□□□ -0.82
SHH4YLR164W IME4P41833 600 aa9.93□□□□□ -0.82
SHH4YLR164W PET130P47065 347 aa9.93□□□□□ -0.82
SHH4YLR164W RNR4P49723 345 aaKnown RBP9.93□□□□□ -0.82
SHH4YLR164W MTO1P53070 669 aa9.93□□□□□ -0.82
SHH4YLR164W AQR1P53943 586 aa9.93□□□□□ -0.82
SHH4YLR164W RMI1Q02685 241 aa9.93□□□□□ -0.82
SHH4YLR164W YMR178WQ03219 274 aaKnown RBP9.93□□□□□ -0.82
SHH4YLR164W SPO20Q04359 397 aa9.93□□□□□ -0.82
SHH4YLR164W RCO1Q04779 684 aa9.93□□□□□ -0.82
SHH4YLR164W YPL225WQ08971 146 aaKnown RBP9.93□□□□□ -0.82
SHH4YLR164W RAD3P06839 778 aa9.92□□□□□ -0.82
SHH4YLR164W HSC82P15108 705 aaKnown RBP9.92□□□□□ -0.82
SHH4YLR164W HEM3P28789 327 aa9.92□□□□□ -0.82
SHH4YLR164W MVD1P32377 396 aaKnown RBP9.92□□□□□ -0.82
SHH4YLR164W SPS19P32573 292 aaKnown RBP9.92□□□□□ -0.82
SHH4YLR164W TFC3P34111 1160 aa9.92□□□□□ -0.82
SHH4YLR164W CTP1P38152 299 aa9.92□□□□□ -0.82
SHH4YLR164W PCL5P38794 229 aa9.92□□□□□ -0.82
SHH4YLR164W LRP1P38801 184 aaKnown RBP9.92□□□□□ -0.82
SHH4YLR164W RPH1P39956 796 aa9.92□□□□□ -0.82
SHH4YLR164W COA1P40452 197 aa9.92□□□□□ -0.82
SHH4YLR164W LSB3P43603 459 aaKnown RBP9.92□□□□□ -0.82
SHH4YLR164W ARC1P46672 376 aaKnown RBP9.92□□□□□ -0.82
SHH4YLR164W TMA22P47089 198 aaPredicted RBP9.92□□□□□ -0.82
SHH4YLR164W TEL2P53038 688 aa9.92□□□□□ -0.82
SHH4YLR164W TDA7P53882 636 aaPredicted RBP9.92□□□□□ -0.82
SHH4YLR164W PPN1Q04119 674 aa9.92□□□□□ -0.82
SHH4YLR164W YDR338CQ05497 695 aa9.92□□□□□ -0.82
SHH4YLR164W RIF2Q06208 395 aa9.92□□□□□ -0.82
SHH4YLR164W HDA3Q06623 655 aa9.92□□□□□ -0.82
SHH4YLR164W FUS1P11710 512 aa9.91□□□□□ -0.82
SHH4YLR164W SEC15P22224 910 aa9.91□□□□□ -0.82
SHH4YLR164W YCR090CP25654 182 aaKnown RBP9.91□□□□□ -0.82
SHH4YLR164W PRP18P33411 251 aaPredicted RBP9.91□□□□□ -0.82
SHH4YLR164W SIP2P34164 415 aaKnown RBP9.91□□□□□ -0.82
SHH4YLR164W NUP120P35729 1037 aa9.91□□□□□ -0.82
SHH4YLR164W MPT5P39016 859 aaKnown RBP RIP-Chip data9.91□□□□□ -0.82not detected
SHH4YLR164W YHB1P39676 399 aaKnown RBP9.91□□□□□ -0.82
SHH4YLR164W YJR154WP47181 346 aa9.91□□□□□ -0.82
SHH4YLR164W MRM2P53123 320 aa9.91□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms